BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013214
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   448   e-124
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   442   e-122
ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho...   439   e-121
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      436   e-120
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       435   e-120

>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  448 bits (1153), Expect = e-124
 Identities = 228/318 (71%), Positives = 259/318 (81%), Gaps = 3/318 (0%)
 Frame = +1

Query: 4    RILSTMRNGMCIGDKKFEFLAFSSSQLRENSTWMFASRPGLTAADIRKWMGDFRKIRNVA 183
            RILS ++NG+ IGDKKF+FLAFSSSQLR+NS WMFASRPGLTAA+IR WMGDF +IRNVA
Sbjct: 426  RILSILQNGIVIGDKKFDFLAFSSSQLRDNSAWMFASRPGLTAAEIRSWMGDFSQIRNVA 485

Query: 184  KYAARLGQSFSSSTETLTVYRDEVEVIPDVE---NSANYVFSDGIGKISPEFARAVAKKC 354
            KYAARLGQSFSSS ETL V +DE+E IPD+E       YVFSDGIGKISP+ A  VA KC
Sbjct: 486  KYAARLGQSFSSSKETLKVAKDEIENIPDIEIHKGRTTYVFSDGIGKISPQLAHRVAIKC 545

Query: 355  HRTTSTPSAFQIRYGGYKGVVAVDPTXXXXXXXXXXXXXYESENNKLDVLAYSKYQPCYL 534
               +STPSAFQIRYGGYKGVVAVDPT             YES+N  LDVLA+SKYQP +L
Sbjct: 546  GCKSSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESDNTNLDVLAWSKYQPSFL 605

Query: 535  NRQLITLLSTLGVRDAIFERKQGEAVKQLDNILVDPASAQEAIEIMSPGETTNVLKEMLL 714
            NRQLITLLSTLGV+D +FE+KQ  AV QLD IL DP +AQEA+E+MSPGE TNVLKEML+
Sbjct: 606  NRQLITLLSTLGVKDHVFEKKQRAAVDQLDTILKDPVAAQEALELMSPGENTNVLKEMLM 665

Query: 715  CGYKPDVEPFLSMLLQTFRATKLLELRTRSRIFIPKGRSLMGCLDETRTLDYGEVFVQVS 894
            CGYKPD EPFLSM+LQTFRA KLLELRT++RIF+P GRS+MGCLDETRTL+YGEVFVQ+S
Sbjct: 666  CGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQIS 725

Query: 895  RTGNKNVYDDGLSKFSGS 948
             TG +  + D L  F GS
Sbjct: 726  GTGGRQSFGDSL-MFRGS 742


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  442 bits (1138), Expect = e-122
 Identities = 226/318 (71%), Positives = 257/318 (80%), Gaps = 3/318 (0%)
 Frame = +1

Query: 4    RILSTMRNGMCIGDKKFEFLAFSSSQLRENSTWMFASRPGLTAADIRKWMGDFRKIRNVA 183
            RILS ++NG+ IGDKKF+FLA SSSQLR+NS WMFASRPGLTAADIR  MGDF +IRNVA
Sbjct: 424  RILSILQNGIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGLTAADIRSRMGDFSQIRNVA 483

Query: 184  KYAARLGQSFSSSTETLTVYRDEVEVIPDVE---NSANYVFSDGIGKISPEFARAVAKKC 354
            KYAARLGQSFSSS ETL V + E+E+IPD+E   +   YVFSDGIGKIS E A  VA KC
Sbjct: 484  KYAARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHRVAIKC 543

Query: 355  HRTTSTPSAFQIRYGGYKGVVAVDPTXXXXXXXXXXXXXYESENNKLDVLAYSKYQPCYL 534
                STPSAFQIRYGGYKGVVAVDPT             YESEN  LDVL++SKY+PC+L
Sbjct: 544  GCKNSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFL 603

Query: 535  NRQLITLLSTLGVRDAIFERKQGEAVKQLDNILVDPASAQEAIEIMSPGETTNVLKEMLL 714
            NRQLITLLSTLGV+D +FE+KQ EAV QLD IL DP  AQEA+E+MSPGE TN+LKEML+
Sbjct: 604  NRQLITLLSTLGVKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLM 663

Query: 715  CGYKPDVEPFLSMLLQTFRATKLLELRTRSRIFIPKGRSLMGCLDETRTLDYGEVFVQVS 894
            CGYKPD EPFLSM+LQTFRA KLLELRT++RIF+P GRS+MGCLDETRTL+YGEVFVQ+S
Sbjct: 664  CGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQIS 723

Query: 895  RTGNKNVYDDGLSKFSGS 948
             TG +  + D L  F GS
Sbjct: 724  GTGGRQSFGDSL-MFYGS 740


>ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1133

 Score =  439 bits (1130), Expect = e-121
 Identities = 226/309 (73%), Positives = 254/309 (82%), Gaps = 3/309 (0%)
 Frame = +1

Query: 4    RILSTMRNGMCIGDKKFEFLAFSSSQLRENSTWMFASRPGLTAADIRKWMGDFRKIRNVA 183
            RILST++NG+ IGDKKFEFLAFSSSQLRENS WMFASR GLTAADIR WMG F KIRNVA
Sbjct: 437  RILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTAADIRAWMGSFHKIRNVA 496

Query: 184  KYAARLGQSFSSSTETLTVYRDEVEVIPDVENS---ANYVFSDGIGKISPEFARAVAKKC 354
            +YAARLGQSF SSTETL+V   E+E+IPD+E S     Y+FSDGIGKIS EFAR VA KC
Sbjct: 497  RYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKC 556

Query: 355  HRTTSTPSAFQIRYGGYKGVVAVDPTXXXXXXXXXXXXXYESENNKLDVLAYSKYQPCYL 534
                 TPSAFQIRY GYKGVVAVDPT             YESEN KLDVLA+SKYQPC+L
Sbjct: 557  GCKGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYESENTKLDVLAHSKYQPCFL 616

Query: 535  NRQLITLLSTLGVRDAIFERKQGEAVKQLDNILVDPASAQEAIEIMSPGETTNVLKEMLL 714
            NRQLITLLSTLGV D  FERKQ EAV QLD +L DP  AQEA+E+MSPGE TN+LKEMLL
Sbjct: 617  NRQLITLLSTLGVPDHHFERKQREAVDQLDAMLTDPLRAQEALELMSPGENTNILKEMLL 676

Query: 715  CGYKPDVEPFLSMLLQTFRATKLLELRTRSRIFIPKGRSLMGCLDETRTLDYGEVFVQVS 894
            CGY+PD EPFLSM+LQTFRA+KLLELRT++RIFIP GRS+MGCLDETRTL++G+VFV+ S
Sbjct: 677  CGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLEHGQVFVKFS 736

Query: 895  RTGNKNVYD 921
             +  +N+YD
Sbjct: 737  GSRFRNLYD 745


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  436 bits (1121), Expect = e-120
 Identities = 219/301 (72%), Positives = 251/301 (83%), Gaps = 3/301 (0%)
 Frame = +1

Query: 1    ERILSTMRNGMCIGDKKFEFLAFSSSQLRENSTWMFASRPGLTAADIRKWMGDFRKIRNV 180
            +RILST+RNG+ IG+K+FEFLAFSSSQLRENS WMFASR GLTAADIR WMG+F KIRNV
Sbjct: 429  KRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTAADIRSWMGNFSKIRNV 488

Query: 181  AKYAARLGQSFSSSTETLTVYRDEVEVIPDVE---NSANYVFSDGIGKISPEFARAVAKK 351
            AKYAARLGQSFSSSTETL+V +DE+ +IPD+E   +   YVFSDGIGKIS EFA+ VA K
Sbjct: 489  AKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAAK 548

Query: 352  CHRTTSTPSAFQIRYGGYKGVVAVDPTXXXXXXXXXXXXXYESENNKLDVLAYSKYQPCY 531
            C     TPSAFQIR GG+KGVVA+DPT             YESEN KLDVLA+SKYQPC+
Sbjct: 549  CRLKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCF 608

Query: 532  LNRQLITLLSTLGVRDAIFERKQGEAVKQLDNILVDPASAQEAIEIMSPGETTNVLKEML 711
            LNRQLITLLSTLGV D  FE+KQ E V QL+ +L DP  AQEA+E+MSPGE TN+LKEML
Sbjct: 609  LNRQLITLLSTLGVPDRAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEML 668

Query: 712  LCGYKPDVEPFLSMLLQTFRATKLLELRTRSRIFIPKGRSLMGCLDETRTLDYGEVFVQV 891
            LCGYKPD EPFLSM+L+TFRA+KLLELRT++RIF+ KGRS+MGCLDETRTL+YG+VFVQ 
Sbjct: 669  LCGYKPDAEPFLSMMLETFRASKLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQF 728

Query: 892  S 894
            S
Sbjct: 729  S 729


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  435 bits (1119), Expect = e-120
 Identities = 220/309 (71%), Positives = 253/309 (81%), Gaps = 1/309 (0%)
 Frame = +1

Query: 1    ERILSTMRNGMCIGDKKFEFLAFSSSQLRENSTWMFASRPGLTAADIRKWMGDFRKIRNV 180
            ERILST++NG+ IG KKFEFLAFSSSQLR+NS WMFASRPGLTA DIR WMGDF++IRNV
Sbjct: 118  ERILSTLQNGLVIGAKKFEFLAFSSSQLRDNSVWMFASRPGLTAYDIRTWMGDFQQIRNV 177

Query: 181  AKYAARLGQSFSSSTETLTVYRDEVEVIPDVE-NSANYVFSDGIGKISPEFARAVAKKCH 357
            AKYAARLGQSF SS ETL+V R E++ IPDVE +  NYVFSDGIGKIS +FA  VAKKC 
Sbjct: 178  AKYAARLGQSFGSSRETLSVGRHEIKYIPDVEVHGTNYVFSDGIGKISADFAHRVAKKCG 237

Query: 358  RTTSTPSAFQIRYGGYKGVVAVDPTXXXXXXXXXXXXXYESENNKLDVLAYSKYQPCYLN 537
                TPSAFQIRYGGYKGVVAVDP              YES N KLDVL +SKYQPCYLN
Sbjct: 238  -LQHTPSAFQIRYGGYKGVVAVDPYSPMKLSLRKSMLKYESNNTKLDVLGWSKYQPCYLN 296

Query: 538  RQLITLLSTLGVRDAIFERKQGEAVKQLDNILVDPASAQEAIEIMSPGETTNVLKEMLLC 717
            RQL+TL+STLGV+D +F+RKQ EAV QLD IL D   AQEA+++MSPGE TN+LKEML C
Sbjct: 297  RQLVTLMSTLGVKDEVFKRKQNEAVAQLDAILHDSLKAQEALDLMSPGENTNILKEMLNC 356

Query: 718  GYKPDVEPFLSMLLQTFRATKLLELRTRSRIFIPKGRSLMGCLDETRTLDYGEVFVQVSR 897
            GY PD EPFLSM+LQTFRA+KLL+LRTR+RIFIPKGRS+MGCLDE+RTL+YG+VFVQ + 
Sbjct: 357  GYLPDAEPFLSMMLQTFRASKLLDLRTRTRIFIPKGRSMMGCLDESRTLEYGQVFVQFTG 416

Query: 898  TGNKNVYDD 924
             G +  Y++
Sbjct: 417  AGGRQFYEE 425