BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013194
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat...   205   4e-51
ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat...   189   2e-46
ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp....   189   3e-46
ref|NP_196448.2| pentatricopeptide repeat-containing protein [Ar...   189   3e-46

>ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
           gi|296085293|emb|CBI29025.3| unnamed protein product
           [Vitis vinifera]
          Length = 854

 Score =  205 bits (521), Expect = 4e-51
 Identities = 96/173 (55%), Positives = 132/173 (76%), Gaps = 5/173 (2%)
 Frame = +2

Query: 2   TPGALGFLIRCVGSQGLVDEAEFLFDHAEELS-CVPNLYTYNCLIEVLAKVGRVRMVELR 178
           +PGALGF IRC+GS GLV+EA  LFD  + +  CVPN Y++NCL+E ++K G + +VE+R
Sbjct: 162 SPGALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMR 221

Query: 179 FREMKN----PDKYSFTAMLQAYCNAGMLEDVWRVFKELHGRGWVDEHVFTILVVAFCRW 346
            +EM +    PDKY+ T++LQAYCN+   +    VF E++GRGWVD HV +ILV+ F + 
Sbjct: 222 LKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTFSKC 281

Query: 347 GKVDKVFELVEAMEDLGMRLNEKTFRVLVHGFAKQGSVEKAVEMFKKMKLAGF 505
           G+VDK FEL+E MEDLG+RLNEKTF VL+HGF +Q  V+KA+++FKKM+ +GF
Sbjct: 282 GEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGF 334


>ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Brachypodium distachyon]
          Length = 837

 Score =  189 bits (481), Expect = 2e-46
 Identities = 99/175 (56%), Positives = 121/175 (69%), Gaps = 7/175 (4%)
 Frame = +2

Query: 2   TPGALGFLIRCVGSQGLVDEAEFLFDHAEE-LSCVPNLYTYNCLIEVLAKVGRVRMVELR 178
           TPGALGFL+RC+G+ GL D A  +FD A   LSC PN YT+NCL++ LAK GR    E R
Sbjct: 137 TPGALGFLLRCLGAAGLPDAALLVFDGARTCLSCTPNSYTFNCLLDTLAKAGRADDAEAR 196

Query: 179 FREM------KNPDKYSFTAMLQAYCNAGMLEDVWRVFKELHGRGWVDEHVFTILVVAFC 340
            +EM      ++ DKY+ T++LQ YCNAG  +D   VF+ +  RGWVDEHV TIL VAF 
Sbjct: 197 LQEMVVRCGDESVDKYTLTSLLQCYCNAGRPDDANGVFERMSQRGWVDEHVLTILAVAFS 256

Query: 341 RWGKVDKVFELVEAMEDLGMRLNEKTFRVLVHGFAKQGSVEKAVEMFKKMKLAGF 505
           +WGKVD   EL+  ME LGMR +EKT  VLVHGFAKQ  ++KA+EMF KM   GF
Sbjct: 257 KWGKVDGAVELLGRMELLGMRPSEKTLSVLVHGFAKQLRLDKAMEMFDKMGSYGF 311


>ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|222856609|gb|EEE94156.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  189 bits (480), Expect = 2e-46
 Identities = 91/173 (52%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
 Frame = +2

Query: 2   TPGALGFLIRCVGSQGLVDEAEFLFDHAEELS-CVPNLYTYNCLIEVLAKVGRVRMVELR 178
           +PGALGFLIRC+G+ GLV EA  LFD  +++  CVPN Y+Y CL+EVL+K   + ++E+R
Sbjct: 29  SPGALGFLIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMR 88

Query: 179 FREMKNP----DKYSFTAMLQAYCNAGMLEDVWRVFKELHGRGWVDEHVFTILVVAFCRW 346
            +EM +     DKY+ T +LQ YCN    +    VF E+H RGWVDE+VF+ILV+AF +W
Sbjct: 89  LKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWVDEYVFSILVLAFSKW 148

Query: 347 GKVDKVFELVEAMEDLGMRLNEKTFRVLVHGFAKQGSVEKAVEMFKKMKLAGF 505
           GKVDK  EL+E ME+  +RLN+KTF  L++GF K+  V+KA+ +F KMK +GF
Sbjct: 149 GKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGF 201


>ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319188|gb|EFH49610.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1281

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/174 (51%), Positives = 124/174 (71%), Gaps = 7/174 (4%)
 Frame = +2

Query: 2   TPGALGFLIRCVGSQGLVDEAEFLFDHAEELS-CVPNLYTYNCLIEVLAKVGR--VRMVE 172
           +PGALGF IRC+G+ GLV+EA  +FD   E+  CVPN YTYNCL+E ++K     V +VE
Sbjct: 140 SPGALGFFIRCLGNAGLVEEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVE 199

Query: 173 LRFREMKNP----DKYSFTAMLQAYCNAGMLEDVWRVFKELHGRGWVDEHVFTILVVAFC 340
            R +EM++     DK++ T +LQ YCN G  E    VF E+  RGW+DEH+ TILVV+FC
Sbjct: 200 ARLKEMRDCGFHFDKFTLTPVLQVYCNNGKSERALSVFNEILSRGWLDEHISTILVVSFC 259

Query: 341 RWGKVDKVFELVEAMEDLGMRLNEKTFRVLVHGFAKQGSVEKAVEMFKKMKLAG 502
           +WG+VDK FEL+E +E+  +RLN KTF VL+HGF K+  ++KA ++F+KM+  G
Sbjct: 260 KWGQVDKAFELIEMLEERHIRLNYKTFCVLIHGFVKESRIDKAFQLFEKMRRMG 313


>ref|NP_196448.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635617|sp|P0C8Q6.1|PP368_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g08310, mitochondrial; Flags: Precursor
           gi|332003898|gb|AED91281.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 832

 Score =  189 bits (479), Expect = 3e-46
 Identities = 89/174 (51%), Positives = 123/174 (70%), Gaps = 7/174 (4%)
 Frame = +2

Query: 2   TPGALGFLIRCVGSQGLVDEAEFLFDHAEELS-CVPNLYTYNCLIEVLAKVGR--VRMVE 172
           +PGA GF IRC+G+ GLVDEA  +FD   E+  CVPN YTYNCL+E ++K     V +VE
Sbjct: 140 SPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVE 199

Query: 173 LRFREMKNP----DKYSFTAMLQAYCNAGMLEDVWRVFKELHGRGWVDEHVFTILVVAFC 340
            R +EM++     DK++ T +LQ YCN G  E    VF E+  RGW+DEH+ TILVV+FC
Sbjct: 200 ARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFC 259

Query: 341 RWGKVDKVFELVEAMEDLGMRLNEKTFRVLVHGFAKQGSVEKAVEMFKKMKLAG 502
           +WG+VDK FEL+E +E+  +RLN KT+ VL+HGF K+  ++KA ++F+KM+  G
Sbjct: 260 KWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMG 313