BLASTX nr result

ID: Dioscorea21_contig00013173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013173
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containin...   167   1e-39
ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containin...   161   6e-38
emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]   161   6e-38
ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containin...   159   2e-37
emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]   159   2e-37

>ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 353

 Score =  167 bits (422), Expect = 1e-39
 Identities = 91/172 (52%), Positives = 111/172 (64%), Gaps = 1/172 (0%)
 Frame = +1

Query: 1   VFECWLHPARYRTQPCKDGTACRRRVCFFAHTPEQLRVLPQTQSPKAPVESYDGSPLRHH 180
           VFECWLHPARYRTQPCKDGT+CRRRVCFFAHTP+QLRVLPQ QSP++  +SYDGSPLR H
Sbjct: 140 VFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPDQLRVLPQ-QSPRS-ADSYDGSPLR-H 196

Query: 181 ALDAYFTKNMFXXXXXXXXXXXXXXXXXXXXXXXXXXRRAPVGASVNEVLASLRQLQLSK 360
           A+++   K+                              +P+  SVNE++ASLR LQL K
Sbjct: 197 AIESSCAKS-----------HPFVASPGSASSPVESPPMSPMTVSVNEMVASLRNLQLGK 245

Query: 361 AKSAPSSWGLQMGCGLGSPRSPVVRGGGGFSSLPATPTRSSV-GSPGWFDRW 513
            KS PSSW +    G GSPR P++R   GF SLP TPT++   G   +FD+W
Sbjct: 246 VKSLPSSWNVMGSSGFGSPRGPMIR--PGFFSLPTTPTQAPTRGGVNYFDQW 295


>ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Vitis vinifera]
          Length = 388

 Score =  161 bits (407), Expect = 6e-38
 Identities = 95/166 (57%), Positives = 109/166 (65%), Gaps = 6/166 (3%)
 Frame = +1

Query: 1   VFECWLHPARYRTQPCKDGTACRRRVCFFAHTPEQLRVLPQTQSPKAP--VESYDGSPLR 174
           VFECWLHPARYRTQPCKDG  CRRRVCFFAHT EQLRVLPQ QSP+ P  VESYDGSPLR
Sbjct: 164 VFECWLHPARYRTQPCKDGPNCRRRVCFFAHTAEQLRVLPQ-QSPRTPGSVESYDGSPLR 222

Query: 175 HHALDAYFTKNM-FXXXXXXXXXXXXXXXXXXXXXXXXXXRRAPVGA-SVNEVLASLRQL 348
             AL+A   K + F                              +G+ S+NE++ASLRQL
Sbjct: 223 -QALEASCAKTLPFMSSPGSVSPPGSPPPESPPMSPITSSLSRSLGSNSINEMVASLRQL 281

Query: 349 QLSKAKSAPSSWGLQMGC--GLGSPRSPVVRGGGGFSSLPATPTRS 480
           QLSK KSAPSSW + MG   G GSPR+ ++R   GF SLP+TPTR+
Sbjct: 282 QLSKVKSAPSSWCVHMGSPGGFGSPRASIIR--PGFCSLPSTPTRA 325


>emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]
          Length = 460

 Score =  161 bits (407), Expect = 6e-38
 Identities = 95/166 (57%), Positives = 109/166 (65%), Gaps = 6/166 (3%)
 Frame = +1

Query: 1   VFECWLHPARYRTQPCKDGTACRRRVCFFAHTPEQLRVLPQTQSPKAP--VESYDGSPLR 174
           VFECWLHPARYRTQPCKDG  CRRRVCFFAHT EQLRVLPQ QSP+ P  VESYDGSPLR
Sbjct: 204 VFECWLHPARYRTQPCKDGPNCRRRVCFFAHTAEQLRVLPQ-QSPRTPGSVESYDGSPLR 262

Query: 175 HHALDAYFTKNM-FXXXXXXXXXXXXXXXXXXXXXXXXXXRRAPVGA-SVNEVLASLRQL 348
             AL+A   K + F                              +G+ S+NE++ASLRQL
Sbjct: 263 -QALEASCAKTLPFMSSPGSVSPPGSPPPESPPMSPITSSLSRSLGSNSINEMVASLRQL 321

Query: 349 QLSKAKSAPSSWGLQMGC--GLGSPRSPVVRGGGGFSSLPATPTRS 480
           QLSK KSAPSSW + MG   G GSPR+ ++R   GF SLP+TPTR+
Sbjct: 322 QLSKVKSAPSSWCVHMGSPGGFGSPRASIIR--PGFCSLPSTPTRA 365


>ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containing protein 20 [Vitis
           vinifera]
          Length = 379

 Score =  159 bits (403), Expect = 2e-37
 Identities = 92/175 (52%), Positives = 106/175 (60%), Gaps = 4/175 (2%)
 Frame = +1

Query: 1   VFECWLHPARYRTQPCKDGTACRRRVCFFAHTPEQLRVLPQTQSPK--APVESYDGSPLR 174
           VFECWLHPARYRTQPCKDG+ CRRRVCFFAHTPEQLRVLPQ QSP+     ESYDGSPLR
Sbjct: 157 VFECWLHPARYRTQPCKDGSGCRRRVCFFAHTPEQLRVLPQ-QSPRNHGSAESYDGSPLR 215

Query: 175 HHALDAYFTKNMFXXXXXXXXXXXXXXXXXXXXXXXXXXRRAPVG-ASVNEVLASLRQLQ 351
             A D Y +K  F                                  S++E++AS+R LQ
Sbjct: 216 -LAFDPYLSKGSFISSPTSTLISPPVSPPSDSPPMSPNSPSFTGSFNSMSELVASMRNLQ 274

Query: 352 LSKAKSAPSSWGLQMGCGLGSPRSPVVRGGGGFSSLPATPTRSSVGSP-GWFDRW 513
           + KAK +P SWG+QMG G GSPR   +R   GF SLP+TPTR+   S  G  D W
Sbjct: 275 VGKAKMSPQSWGVQMGSGFGSPRGSTLR--PGFCSLPSTPTRTPARSGLGGLDVW 327


>emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]
          Length = 426

 Score =  159 bits (403), Expect = 2e-37
 Identities = 92/175 (52%), Positives = 106/175 (60%), Gaps = 4/175 (2%)
 Frame = +1

Query: 1   VFECWLHPARYRTQPCKDGTACRRRVCFFAHTPEQLRVLPQTQSPK--APVESYDGSPLR 174
           VFECWLHPARYRTQPCKDG+ CRRRVCFFAHTPEQLRVLPQ QSP+     ESYDGSPLR
Sbjct: 204 VFECWLHPARYRTQPCKDGSGCRRRVCFFAHTPEQLRVLPQ-QSPRNHGSAESYDGSPLR 262

Query: 175 HHALDAYFTKNMFXXXXXXXXXXXXXXXXXXXXXXXXXXRRAPVG-ASVNEVLASLRQLQ 351
             A D Y +K  F                                  S++E++AS+R LQ
Sbjct: 263 -LAFDPYLSKGSFISSPTSTLISPPVSPPSDSPPMSPNSPSFTGSFNSMSELVASMRNLQ 321

Query: 352 LSKAKSAPSSWGLQMGCGLGSPRSPVVRGGGGFSSLPATPTRSSVGSP-GWFDRW 513
           + KAK +P SWG+QMG G GSPR   +R   GF SLP+TPTR+   S  G  D W
Sbjct: 322 VGKAKMSPQSWGVQMGSGFGSPRGSTLR--PGFCSLPSTPTRTPARSGLGGLDVW 374


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