BLASTX nr result
ID: Dioscorea21_contig00013170
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00013170 (329 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285533.1| PREDICTED: uncharacterized protein LOC100252... 64 1e-08 ref|XP_002317444.1| predicted protein [Populus trichocarpa] gi|2... 58 9e-07 ref|XP_002331705.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 >ref|XP_002285533.1| PREDICTED: uncharacterized protein LOC100252018 [Vitis vinifera] gi|302142861|emb|CBI20156.3| unnamed protein product [Vitis vinifera] Length = 470 Score = 63.9 bits (154), Expect = 1e-08 Identities = 42/108 (38%), Positives = 55/108 (50%) Frame = +1 Query: 1 LVHQFFRRFPAPFRHEEGDAAVVRADLEGRKRDGAVEMRGSGAGEVVGLAAEQVGVWGLP 180 +V QFFRR P PFR +EG AA VR G++ D V ++ E LA E++ +G Sbjct: 101 VVQQFFRRLPVPFRQDEGVAASVRLGGSGQRADLGVALQ-----EDFRLATERLREFGFA 155 Query: 181 EASKVXXXXXXXXXXXXXADPRASEHIGMSQGSINITSTYNSRTNDYE 324 E D ++ H G QG+INITSTY+SRT D E Sbjct: 156 ENEGTLDGLVEEEIPGF--DLSSAGHFGRPQGTINITSTYDSRTRDVE 201 >ref|XP_002317444.1| predicted protein [Populus trichocarpa] gi|222860509|gb|EEE98056.1| predicted protein [Populus trichocarpa] Length = 460 Score = 57.8 bits (138), Expect = 9e-07 Identities = 44/112 (39%), Positives = 56/112 (50%), Gaps = 3/112 (2%) Frame = +1 Query: 1 LVHQFFRRFPAPFRHEEGDAAVVRAD-LEGRKRD-GAVE-MRGSGAGEVVGLAAEQVGVW 171 LVHQFFRR P PF+ EE A +R D R RD G VE G G+ V L E++G + Sbjct: 103 LVHQFFRRLPVPFKQEESVGAGLRMDGKRKRLRDFGFVEDNSGVGSRGVDELLEEEIGGF 162 Query: 172 GLPEASKVXXXXXXXXXXXXXADPRASEHIGMSQGSINITSTYNSRTNDYEG 327 L + +G QG+INITSTY+SRT++ EG Sbjct: 163 NL----------------------KGVGFLGKPQGTINITSTYDSRTHNIEG 192 >ref|XP_002331705.1| predicted protein [Populus trichocarpa] gi|222874311|gb|EEF11442.1| predicted protein [Populus trichocarpa] Length = 473 Score = 55.1 bits (131), Expect = 6e-06 Identities = 46/125 (36%), Positives = 57/125 (45%), Gaps = 17/125 (13%) Frame = +1 Query: 1 LVHQFFRRFPAPFRHEEGDAAVVRAD---------LEG-------RKRD-GAVEMRGSGA 129 +VHQFFRR P PF+ +E VR D LEG R RD G VE G G Sbjct: 103 MVHQFFRRLPVPFKQDETGGVGVRMDGKSSEVGLGLEGELGLVSERLRDFGFVEDSGGGG 162 Query: 130 GEVVGLAAEQVGVWGLPEASKVXXXXXXXXXXXXXADPRASEHIGMSQGSINITSTYNSR 309 G V GL E++G L + + G QG+INITSTY+SR Sbjct: 163 G-VDGLLDEEIGGLNL----------------------KGVGYPGKPQGTINITSTYDSR 199 Query: 310 TNDYE 324 T++ E Sbjct: 200 THNIE 204