BLASTX nr result

ID: Dioscorea21_contig00013170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013170
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285533.1| PREDICTED: uncharacterized protein LOC100252...    64   1e-08
ref|XP_002317444.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002331705.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002285533.1| PREDICTED: uncharacterized protein LOC100252018 [Vitis vinifera]
           gi|302142861|emb|CBI20156.3| unnamed protein product
           [Vitis vinifera]
          Length = 470

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 42/108 (38%), Positives = 55/108 (50%)
 Frame = +1

Query: 1   LVHQFFRRFPAPFRHEEGDAAVVRADLEGRKRDGAVEMRGSGAGEVVGLAAEQVGVWGLP 180
           +V QFFRR P PFR +EG AA VR    G++ D  V ++     E   LA E++  +G  
Sbjct: 101 VVQQFFRRLPVPFRQDEGVAASVRLGGSGQRADLGVALQ-----EDFRLATERLREFGFA 155

Query: 181 EASKVXXXXXXXXXXXXXADPRASEHIGMSQGSINITSTYNSRTNDYE 324
           E                  D  ++ H G  QG+INITSTY+SRT D E
Sbjct: 156 ENEGTLDGLVEEEIPGF--DLSSAGHFGRPQGTINITSTYDSRTRDVE 201


>ref|XP_002317444.1| predicted protein [Populus trichocarpa] gi|222860509|gb|EEE98056.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 44/112 (39%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
 Frame = +1

Query: 1   LVHQFFRRFPAPFRHEEGDAAVVRAD-LEGRKRD-GAVE-MRGSGAGEVVGLAAEQVGVW 171
           LVHQFFRR P PF+ EE   A +R D    R RD G VE   G G+  V  L  E++G +
Sbjct: 103 LVHQFFRRLPVPFKQEESVGAGLRMDGKRKRLRDFGFVEDNSGVGSRGVDELLEEEIGGF 162

Query: 172 GLPEASKVXXXXXXXXXXXXXADPRASEHIGMSQGSINITSTYNSRTNDYEG 327
            L                      +    +G  QG+INITSTY+SRT++ EG
Sbjct: 163 NL----------------------KGVGFLGKPQGTINITSTYDSRTHNIEG 192


>ref|XP_002331705.1| predicted protein [Populus trichocarpa] gi|222874311|gb|EEF11442.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 46/125 (36%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
 Frame = +1

Query: 1   LVHQFFRRFPAPFRHEEGDAAVVRAD---------LEG-------RKRD-GAVEMRGSGA 129
           +VHQFFRR P PF+ +E     VR D         LEG       R RD G VE  G G 
Sbjct: 103 MVHQFFRRLPVPFKQDETGGVGVRMDGKSSEVGLGLEGELGLVSERLRDFGFVEDSGGGG 162

Query: 130 GEVVGLAAEQVGVWGLPEASKVXXXXXXXXXXXXXADPRASEHIGMSQGSINITSTYNSR 309
           G V GL  E++G   L                      +   + G  QG+INITSTY+SR
Sbjct: 163 G-VDGLLDEEIGGLNL----------------------KGVGYPGKPQGTINITSTYDSR 199

Query: 310 TNDYE 324
           T++ E
Sbjct: 200 THNIE 204


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