BLASTX nr result

ID: Dioscorea21_contig00013141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013141
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
emb|CBI27769.3| unnamed protein product [Vitis vinifera]              163   1e-38
ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   163   1e-38
gb|EEC78384.1| hypothetical protein OsI_18162 [Oryza sativa Indi...   162   3e-38
ref|NP_001054440.2| Os05g0110500 [Oryza sativa Japonica Group] g...   162   3e-38

>ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1|
           predicted protein [Populus trichocarpa]
          Length = 594

 Score =  166 bits (420), Expect = 2e-39
 Identities = 75/105 (71%), Positives = 89/105 (84%)
 Frame = +3

Query: 3   VVFLSTCDAVDFHYSLLSGFCWSANLQATKDQKLKFIGCKVIRLHGNMQHEDRKTSYQSF 182
           VVF STCDAVDFHYSLLS FCWS N Q+  +   +F+ C  +RLHGNM+ EDR+ ++Q+F
Sbjct: 328 VVFFSTCDAVDFHYSLLSEFCWSPNSQSEAEHTERFLRCNTLRLHGNMKQEDRRNTFQAF 387

Query: 183 NSEKSALLLCTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 317
            +EKSALLL TD+AARGLDFPKVRCI+QYDSPGEA+EYVHRVGRT
Sbjct: 388 KTEKSALLLSTDIAARGLDFPKVRCIVQYDSPGEATEYVHRVGRT 432


>emb|CBI27769.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  163 bits (413), Expect = 1e-38
 Identities = 77/105 (73%), Positives = 86/105 (81%)
 Frame = +3

Query: 3   VVFLSTCDAVDFHYSLLSGFCWSANLQATKDQKLKFIGCKVIRLHGNMQHEDRKTSYQSF 182
           VVF STCDAVDFHYSL S F W ANL    + +  F+  K  +LHGNM+HEDR+T++Q+F
Sbjct: 320 VVFFSTCDAVDFHYSLFSAFLWPANLHPETEDRQMFLRFKTFQLHGNMKHEDRRTTFQTF 379

Query: 183 NSEKSALLLCTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 317
             EKSALLL TDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT
Sbjct: 380 KKEKSALLLSTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 424


>ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis
           vinifera]
          Length = 600

 Score =  163 bits (413), Expect = 1e-38
 Identities = 77/105 (73%), Positives = 86/105 (81%)
 Frame = +3

Query: 3   VVFLSTCDAVDFHYSLLSGFCWSANLQATKDQKLKFIGCKVIRLHGNMQHEDRKTSYQSF 182
           VVF STCDAVDFHYSL S F W ANL    + +  F+  K  +LHGNM+HEDR+T++Q+F
Sbjct: 336 VVFFSTCDAVDFHYSLFSAFLWPANLHPETEDRQMFLRFKTFQLHGNMKHEDRRTTFQTF 395

Query: 183 NSEKSALLLCTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 317
             EKSALLL TDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT
Sbjct: 396 KKEKSALLLSTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 440


>gb|EEC78384.1| hypothetical protein OsI_18162 [Oryza sativa Indica Group]
          Length = 591

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/105 (73%), Positives = 88/105 (83%)
 Frame = +3

Query: 3   VVFLSTCDAVDFHYSLLSGFCWSANLQATKDQKLKFIGCKVIRLHGNMQHEDRKTSYQSF 182
           VVFLSTCD+VDFH+++LS   WS  LQ   D+K KFI CKV RLHGNM  +DRK S+  F
Sbjct: 327 VVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGF 386

Query: 183 NSEKSALLLCTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 317
           +SEKSA+L+ TDVAARGLDFPKV+CIIQYDSPGEASEYVHRVGRT
Sbjct: 387 SSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRT 431


>ref|NP_001054440.2| Os05g0110500 [Oryza sativa Japonica Group]
           gi|143361335|sp|Q0DLB9.2|RH17_ORYSJ RecName:
           Full=DEAD-box ATP-dependent RNA helicase 17
           gi|222629939|gb|EEE62071.1| hypothetical protein
           OsJ_16855 [Oryza sativa Japonica Group]
           gi|255675949|dbj|BAF16354.2| Os05g0110500 [Oryza sativa
           Japonica Group]
          Length = 591

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/105 (73%), Positives = 88/105 (83%)
 Frame = +3

Query: 3   VVFLSTCDAVDFHYSLLSGFCWSANLQATKDQKLKFIGCKVIRLHGNMQHEDRKTSYQSF 182
           VVFLSTCD+VDFH+++LS   WS  LQ   D+K KFI CKV RLHGNM  +DRK S+  F
Sbjct: 327 VVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGF 386

Query: 183 NSEKSALLLCTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 317
           +SEKSA+L+ TDVAARGLDFPKV+CIIQYDSPGEASEYVHRVGRT
Sbjct: 387 SSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRT 431


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