BLASTX nr result

ID: Dioscorea21_contig00013134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013134
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327171.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
dbj|BAK02978.1| predicted protein [Hordeum vulgare subsp. vulgar...    67   1e-09
dbj|BAJ99071.1| predicted protein [Hordeum vulgare subsp. vulgare]     67   1e-09
ref|XP_002453338.1| hypothetical protein SORBIDRAFT_04g004080 [S...    67   2e-09
gb|ACR38656.1| unknown [Zea mays] gi|413935652|gb|AFW70203.1| hy...    67   2e-09

>ref|XP_002327171.1| predicted protein [Populus trichocarpa] gi|222835486|gb|EEE73921.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/51 (62%), Positives = 43/51 (84%)
 Frame = +1

Query: 169 VPAGSGDAWGLLSMARQLVGEGKPSLALQAVVMAMKSEGGQQAVFETLHRA 321
           VP  + +  GLL++ARQL+ +GKPS ALQAVVMAM+++GG QAVF++LHRA
Sbjct: 26  VPDDNNNVRGLLTLARQLISQGKPSQALQAVVMAMRTKGGDQAVFQSLHRA 76


>dbj|BAK02978.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326513670|dbj|BAJ87854.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 177

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/50 (60%), Positives = 43/50 (86%)
 Frame = +1

Query: 172 PAGSGDAWGLLSMARQLVGEGKPSLALQAVVMAMKSEGGQQAVFETLHRA 321
           PA +GD W +LS AR L+ EG+PSLALQAV++A++S+GG+QA+ +TL+RA
Sbjct: 29  PAAAGDGWSMLSRARGLLQEGQPSLALQAVLLAIRSQGGEQALIQTLNRA 78


>dbj|BAJ99071.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 177

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/50 (60%), Positives = 43/50 (86%)
 Frame = +1

Query: 172 PAGSGDAWGLLSMARQLVGEGKPSLALQAVVMAMKSEGGQQAVFETLHRA 321
           PA +GD W +LS AR L+ EG+PSLALQAV++A++S+GG+QA+ +TL+RA
Sbjct: 29  PAAAGDGWSMLSRARGLLQEGQPSLALQAVLLAIRSQGGEQALIQTLNRA 78


>ref|XP_002453338.1| hypothetical protein SORBIDRAFT_04g004080 [Sorghum bicolor]
           gi|241933169|gb|EES06314.1| hypothetical protein
           SORBIDRAFT_04g004080 [Sorghum bicolor]
          Length = 178

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/72 (50%), Positives = 49/72 (68%)
 Frame = +1

Query: 106 VGMEEDKGGSAAAMEVEDAGGVPAGSGDAWGLLSMARQLVGEGKPSLALQAVVMAMKSEG 285
           V ME D      A  V  A   PA  G+ W +LS AR L+ EGKPSLALQAV++A++S+G
Sbjct: 10  VEMEMDPAPQPPAPAVAPA---PAAVGEGWSMLSRARGLLEEGKPSLALQAVLLAIRSQG 66

Query: 286 GQQAVFETLHRA 321
           G+QA+ +T++RA
Sbjct: 67  GEQALMQTMNRA 78


>gb|ACR38656.1| unknown [Zea mays] gi|413935652|gb|AFW70203.1| hypothetical protein
           ZEAMMB73_378458 [Zea mays]
          Length = 172

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/61 (55%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
 Frame = +1

Query: 145 MEVEDAGGVPAGS--GDAWGLLSMARQLVGEGKPSLALQAVVMAMKSEGGQQAVFETLHR 318
           ME+E A   PA +  G+ W +LS AR L+ EGKPSLALQAV++A++S+GG+QA+ +TL+R
Sbjct: 12  MEMEPAPQPPAPTAVGEGWSMLSRARGLLEEGKPSLALQAVLLAIRSQGGEQALMQTLNR 71

Query: 319 A 321
           A
Sbjct: 72  A 72


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