BLASTX nr result

ID: Dioscorea21_contig00013107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013107
         (826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139171.1| PREDICTED: 50S ribosomal protein L27-like [C...   229   7e-58
ref|XP_002445188.1| hypothetical protein SORBIDRAFT_07g005640 [S...   228   1e-57
gb|ACG31958.1| 50S ribosomal protein L27 [Zea mays] gi|224035535...   227   3e-57
gb|ACG25289.1| 50S ribosomal protein L27 [Zea mays]                   227   3e-57
gb|ACG31483.1| 50S ribosomal protein L27 [Zea mays]                   224   2e-56

>ref|XP_004139171.1| PREDICTED: 50S ribosomal protein L27-like [Cucumis sativus]
           gi|449482828|ref|XP_004156416.1| PREDICTED: 50S
           ribosomal protein L27-like [Cucumis sativus]
          Length = 148

 Score =  229 bits (583), Expect = 7e-58
 Identities = 104/138 (75%), Positives = 125/138 (90%), Gaps = 1/138 (0%)
 Frame = -3

Query: 743 STLCRRVGLREMVSSVPVYTGASE-ISGGLSLIFRRWATKKTAGSTKNGRDSNPKYLGVK 567
           +T C+R+ ++++V++VPVY+  S+  + GL+L+FRRWATKKTAGSTKNGRDSNPKYLGVK
Sbjct: 6   TTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVK 65

Query: 566 KFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLFALKEGNVRFERHKLSGRKWVHVVP 387
           KFGGERVIPGNIIVRQRGTRFHPGDYVG+GKDHTLFALKEGNV+FE++KLSGRKWVHV+P
Sbjct: 66  KFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKNKLSGRKWVHVIP 125

Query: 386 KEGHDLHPLYSTAETEAE 333
           KEGH LHP+Y T  T  +
Sbjct: 126 KEGHVLHPVYETTSTSLQ 143


>ref|XP_002445188.1| hypothetical protein SORBIDRAFT_07g005640 [Sorghum bicolor]
           gi|241941538|gb|EES14683.1| hypothetical protein
           SORBIDRAFT_07g005640 [Sorghum bicolor]
          Length = 146

 Score =  228 bits (581), Expect = 1e-57
 Identities = 107/143 (74%), Positives = 126/143 (88%), Gaps = 5/143 (3%)
 Frame = -3

Query: 752 MNFSTLCRRVGLREMVSSVPVYTGASEISGGLSLIFRRWATKKTAGSTKNGRDSNPKYLG 573
           M  S++ RR+ ++++ S V VYT A+E+SGGL++IFRRWATKKTAGSTKNGRDSNPKYLG
Sbjct: 1   MALSSVFRRINVKDLTSKVSVYTSATELSGGLNMIFRRWATKKTAGSTKNGRDSNPKYLG 60

Query: 572 VKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLFALKEGNVRFERHKLSGRKWVHV 393
           VKKFGGE+V+PGNIIVRQRGTRFHPG+YVGMGKDHTLF LKEG+VRFER+KLSGRKWVHV
Sbjct: 61  VKKFGGEKVLPGNIIVRQRGTRFHPGNYVGMGKDHTLFCLKEGHVRFERNKLSGRKWVHV 120

Query: 392 VPKEGHDLHPLY-----STAETE 339
            P  GHDLHP+Y     +TA+TE
Sbjct: 121 DPVAGHDLHPIYADSFATTADTE 143


>gb|ACG31958.1| 50S ribosomal protein L27 [Zea mays] gi|224035535|gb|ACN36843.1|
           unknown [Zea mays] gi|413921086|gb|AFW61018.1| 50S
           ribosomal protein L27 isoform 1 [Zea mays]
           gi|413921087|gb|AFW61019.1| 50S ribosomal protein L27
           isoform 2 [Zea mays]
          Length = 146

 Score =  227 bits (578), Expect = 3e-57
 Identities = 105/143 (73%), Positives = 126/143 (88%), Gaps = 5/143 (3%)
 Frame = -3

Query: 752 MNFSTLCRRVGLREMVSSVPVYTGASEISGGLSLIFRRWATKKTAGSTKNGRDSNPKYLG 573
           M  S++ +R+ ++++ S V VYT A+E+SGGL++IFRRWATK+TAGSTKNGRDSNPKYLG
Sbjct: 1   MALSSMFKRINVKDLTSKVSVYTSATELSGGLNMIFRRWATKRTAGSTKNGRDSNPKYLG 60

Query: 572 VKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLFALKEGNVRFERHKLSGRKWVHV 393
           VKKFGGE+V+PGNIIVRQRGTRFHPG+YVGMGKDHTLF LKEGNVRFER+KLSGRKWVHV
Sbjct: 61  VKKFGGEKVLPGNIIVRQRGTRFHPGNYVGMGKDHTLFCLKEGNVRFERNKLSGRKWVHV 120

Query: 392 VPKEGHDLHPLY-----STAETE 339
            P  GHDLHP+Y     +T++TE
Sbjct: 121 DPVAGHDLHPIYADGFATTSDTE 143


>gb|ACG25289.1| 50S ribosomal protein L27 [Zea mays]
          Length = 146

 Score =  227 bits (578), Expect = 3e-57
 Identities = 105/143 (73%), Positives = 126/143 (88%), Gaps = 5/143 (3%)
 Frame = -3

Query: 752 MNFSTLCRRVGLREMVSSVPVYTGASEISGGLSLIFRRWATKKTAGSTKNGRDSNPKYLG 573
           M  S++ +R+ ++++ S V VYT A+E+SGGL++IFRRWATK+TAGSTKNGRDSNPKYLG
Sbjct: 1   MALSSMFKRINVKDLTSKVSVYTSATELSGGLNIIFRRWATKRTAGSTKNGRDSNPKYLG 60

Query: 572 VKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLFALKEGNVRFERHKLSGRKWVHV 393
           VKKFGGE+V+PGNIIVRQRGTRFHPG+YVGMGKDHTLF LKEGNVRFER+KLSGRKWVHV
Sbjct: 61  VKKFGGEKVLPGNIIVRQRGTRFHPGNYVGMGKDHTLFCLKEGNVRFERNKLSGRKWVHV 120

Query: 392 VPKEGHDLHPLY-----STAETE 339
            P  GHDLHP+Y     +T++TE
Sbjct: 121 DPVAGHDLHPIYADGFATTSDTE 143


>gb|ACG31483.1| 50S ribosomal protein L27 [Zea mays]
          Length = 146

 Score =  224 bits (571), Expect = 2e-56
 Identities = 104/143 (72%), Positives = 125/143 (87%), Gaps = 5/143 (3%)
 Frame = -3

Query: 752 MNFSTLCRRVGLREMVSSVPVYTGASEISGGLSLIFRRWATKKTAGSTKNGRDSNPKYLG 573
           M  S++ +R+ ++++ S V VYT A+E+SGGL++IFRRWATK+TAGSTKNGRDSNPKYLG
Sbjct: 1   MALSSMFKRINVKDLTSKVSVYTSATELSGGLNMIFRRWATKRTAGSTKNGRDSNPKYLG 60

Query: 572 VKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLFALKEGNVRFERHKLSGRKWVHV 393
           VKKFGGE+V+PGNIIVRQRGTRFHPG+YVGMGK HTLF LKEGNVRFER+KLSGRKWVHV
Sbjct: 61  VKKFGGEKVLPGNIIVRQRGTRFHPGNYVGMGKXHTLFCLKEGNVRFERNKLSGRKWVHV 120

Query: 392 VPKEGHDLHPLY-----STAETE 339
            P  GHDLHP+Y     +T++TE
Sbjct: 121 DPVAGHDLHPIYADGFATTSDTE 143


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