BLASTX nr result

ID: Dioscorea21_contig00013096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013096
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511928.1| conserved hypothetical protein [Ricinus comm...   171   1e-40
ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lyc...   163   3e-38
ref|XP_002301379.1| predicted protein [Populus trichocarpa] gi|2...   161   1e-37
ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258...   161   1e-37
ref|XP_002880220.1| hypothetical protein ARALYDRAFT_483760 [Arab...   157   2e-36

>ref|XP_002511928.1| conserved hypothetical protein [Ricinus communis]
           gi|223549108|gb|EEF50597.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score =  171 bits (433), Expect = 1e-40
 Identities = 92/216 (42%), Positives = 134/216 (62%)
 Frame = +2

Query: 29  EQEQVIPLALSAAIHPSPDQENPSTKPRRHRRRCILCCGSCTAVXXXXXXXXXXXXFTVF 208
           E EQV PLA SA    S D+E      +  RRRCI CCG  TA             FTVF
Sbjct: 3   EHEQVRPLAPSADRTSSDDEEATIHLKKTRRRRCIKCCGCITASLLVPAIVIVILIFTVF 62

Query: 209 KVKEPVLTLNSMTMQGLSALXXXXXXXXGFNVTVIADVSVKNPNAASFKFGSTTTSVYYK 388
           +VK+P + LN++ +  +  L        G N++++AD+SVKNPN  SFK+ +TT+++YY 
Sbjct: 63  RVKDPTIKLNNVIITHME-LINNTIPKPGTNISLVADLSVKNPNIVSFKYDNTTSALYYH 121

Query: 389 DRLVGVAYGPPGNARADRTLRTNMTVDVLGDQLIGDMDLVTEALTGAVAIKSSTMIGGRV 568
             LVG A GPPG+++A RT+R N T+D++ D+LI + +L T+A TG + + S T + G+V
Sbjct: 122 GVLVGEARGPPGHSKARRTMRLNATIDLVADKLISNPNLNTDAATGLLTVDSYTKLPGKV 181

Query: 569 KIIGIFKHHVDVMMNCSLNIAVINQSILDQNCVHRV 676
           KI+ I K HV + MNCSL + + +Q+I  Q C ++V
Sbjct: 182 KIL-IIKKHVTIKMNCSLTVNISSQAIQSQKCKNKV 216


>ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lycopersicum]
           gi|94549041|gb|ABF39005.1| plant cell wall protein
           SlTFR88 [Solanum lycopersicum]
          Length = 226

 Score =  163 bits (413), Expect = 3e-38
 Identities = 85/224 (37%), Positives = 135/224 (60%), Gaps = 6/224 (2%)
 Frame = +2

Query: 29  EQEQVIPLA-LSAAIHPSPDQENP-STKPRRHRRRCILCCGSCTAVXXXXXXXXXXXXFT 202
           E++QV PLA  S   H S D +   + K R H+RRC   C   +              FT
Sbjct: 3   ERDQVRPLAPASDRPHSSDDDDTTLNIKKRFHQRRCFKYCACVSTFVFLVAIIIIILIFT 62

Query: 203 VFKVKEPVLTLNSMTMQGLSALXXXXXXXX----GFNVTVIADVSVKNPNAASFKFGSTT 370
           VFK+K+P++T+N +T++ L  +            G N+T+ ADVSVKNPN +SFK+ +TT
Sbjct: 63  VFKIKDPIITMNGVTIEKLDLVNTSGTLLPIPKPGSNMTIKADVSVKNPNYSSFKYSNTT 122

Query: 371 TSVYYKDRLVGVAYGPPGNARADRTLRTNMTVDVLGDQLIGDMDLVTEALTGAVAIKSST 550
           T++ Y+D ++G A GPPG ++A +T+R N+T+D++ D+++    L  +  +G + + S T
Sbjct: 123 TTISYRDAVIGEARGPPGKSKARKTMRMNVTIDIMTDKIMSHPGLQDDISSGLLTMNSYT 182

Query: 551 MIGGRVKIIGIFKHHVDVMMNCSLNIAVINQSILDQNCVHRVWL 682
            +GGRVK++ + K +V V MNCS+ + + +QSI DQ C  +V L
Sbjct: 183 SVGGRVKLLNMIKKYVVVKMNCSITVNITSQSIQDQKCTKKVKL 226


>ref|XP_002301379.1| predicted protein [Populus trichocarpa] gi|222843105|gb|EEE80652.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  161 bits (407), Expect = 1e-37
 Identities = 87/217 (40%), Positives = 135/217 (62%)
 Frame = +2

Query: 26  SEQEQVIPLALSAAIHPSPDQENPSTKPRRHRRRCILCCGSCTAVXXXXXXXXXXXXFTV 205
           +++EQV PLA  AA     D+E  S   ++  R+C+ CC   TA+            FTV
Sbjct: 2   AKREQVRPLA-PAAERRCSDEEGASKHHKKRSRKCVKCCVFVTAIFVILVTAIIVLRFTV 60

Query: 206 FKVKEPVLTLNSMTMQGLSALXXXXXXXXGFNVTVIADVSVKNPNAASFKFGSTTTSVYY 385
           F+VK+PV+T+NS T+  L  L        G N+T+IADVSVKNPN ASFK+ +TTT++YY
Sbjct: 61  FRVKDPVITMNSFTITKLE-LSNGTTPKPGVNITLIADVSVKNPNVASFKYSNTTTTLYY 119

Query: 386 KDRLVGVAYGPPGNARADRTLRTNMTVDVLGDQLIGDMDLVTEALTGAVAIKSSTMIGGR 565
             ++VG A   PG+ARA RT+R N+TVD++ D+++ + +L  +  +G +++ + T + GR
Sbjct: 120 DRQIVGEARNGPGHARARRTMRMNVTVDIIPDRIMSNPNLNADMSSGILSMTTYTRVPGR 179

Query: 566 VKIIGIFKHHVDVMMNCSLNIAVINQSILDQNCVHRV 676
           +KI+ I K ++ V M CS+ + + +Q I  Q C  +V
Sbjct: 180 MKIV-IVKRNIVVKMTCSITLNITSQQIQTQQCKRKV 215


>ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258567 [Vitis vinifera]
           gi|147832282|emb|CAN73280.1| hypothetical protein
           VITISV_040609 [Vitis vinifera]
           gi|297745338|emb|CBI40418.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  161 bits (407), Expect = 1e-37
 Identities = 82/212 (38%), Positives = 129/212 (60%)
 Frame = +2

Query: 29  EQEQVIPLALSAAIHPSPDQENPSTKPRRHRRRCILCCGSCTAVXXXXXXXXXXXXFTVF 208
           E+EQV PLA ++    S D +  +   R  RRRCI C G   A             FTVF
Sbjct: 3   EREQVRPLAPASHRLSSEDDKVTNHLSRLRRRRCIKCWGCIAATILIQAAVVIILVFTVF 62

Query: 209 KVKEPVLTLNSMTMQGLSALXXXXXXXXGFNVTVIADVSVKNPNAASFKFGSTTTSVYYK 388
           +VK+PV+ LN  T+  L  +        G N+++ ADVSVKNPN ASF++ +TTT+++Y 
Sbjct: 63  RVKDPVIKLNGFTVDKLELINGTTTPGPGVNMSLTADVSVKNPNFASFRYKNTTTTLFYS 122

Query: 389 DRLVGVAYGPPGNARADRTLRTNMTVDVLGDQLIGDMDLVTEALTGAVAIKSSTMIGGRV 568
             ++G A GPPG A+A RT++ N+T++++ D L+ +  L+T+  +G + + + + + GRV
Sbjct: 123 GTVIGEARGPPGQAKARRTMKMNVTIEIILDSLMSNPSLLTDISSGILPMNTYSRVPGRV 182

Query: 569 KIIGIFKHHVDVMMNCSLNIAVINQSILDQNC 664
           K++ I K HV V MNCS+ + + ++SI +Q C
Sbjct: 183 KMLKIIKKHVVVKMNCSVTVNITSRSIQEQKC 214


>ref|XP_002880220.1| hypothetical protein ARALYDRAFT_483760 [Arabidopsis lyrata subsp.
           lyrata] gi|297326059|gb|EFH56479.1| hypothetical protein
           ARALYDRAFT_483760 [Arabidopsis lyrata subsp. lyrata]
          Length = 221

 Score =  157 bits (397), Expect = 2e-36
 Identities = 89/219 (40%), Positives = 127/219 (57%), Gaps = 2/219 (0%)
 Frame = +2

Query: 26  SEQEQVIPLALSAAIHPSPDQENPSTKPRRHRRRCILCCGSCTAVXXXXXXXXXXXXFTV 205
           ++ E V PLA  A I P  D+   + K  R R+  I C     A             FTV
Sbjct: 2   TDSEHVRPLA-PATILPVSDESASNIKNTRRRKNRIKCLICVIATSIILITIVLTLVFTV 60

Query: 206 FKVKEPVLTLNSMTMQGL-SALXXXXXXXXGFNVTVIADVSVKNPNAASFKFGSTTTSVY 382
           F+VK+P++ +N + + GL S          G N+++I DVSVKNPN ASFK+ +TTT +Y
Sbjct: 61  FRVKDPIIKMNGVMVNGLDSVTGINQVQLLGTNISMIVDVSVKNPNMASFKYSNTTTDIY 120

Query: 383 YKDRLVGVAYGPPGNARADRTLRTNMTVDVLGDQLIGDMDLVTE-ALTGAVAIKSSTMIG 559
           YK  LVG A+G PG AR  RT R N+TVD++ D+++ D  L  E   +G V + S T +G
Sbjct: 121 YKGTLVGEAHGLPGKARPHRTSRMNLTVDIMIDRILSDPGLGRELTRSGLVNMWSYTRVG 180

Query: 560 GRVKIIGIFKHHVDVMMNCSLNIAVINQSILDQNCVHRV 676
           G+VKI+GI K HV V MNC++ + +  Q+I D +C  ++
Sbjct: 181 GKVKILGIVKKHVTVKMNCTMAVNITGQAIQDVDCKKKI 219


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