BLASTX nr result

ID: Dioscorea21_contig00013095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013095
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446092.1| hypothetical protein SORBIDRAFT_06g001630 [S...   156   4e-36
ref|XP_002512448.1| 50S ribosomal protein L18, putative [Ricinus...   156   4e-36
ref|XP_002466632.1| hypothetical protein SORBIDRAFT_01g011330 [S...   156   6e-36
ref|NP_001152098.1| 50S ribosomal protein L18 [Zea mays] gi|2265...   156   6e-36
ref|XP_002283176.1| PREDICTED: 50S ribosomal protein L18 [Vitis ...   155   1e-35

>ref|XP_002446092.1| hypothetical protein SORBIDRAFT_06g001630 [Sorghum bicolor]
           gi|241937275|gb|EES10420.1| hypothetical protein
           SORBIDRAFT_06g001630 [Sorghum bicolor]
          Length = 114

 Score =  156 bits (395), Expect = 4e-36
 Identities = 77/101 (76%), Positives = 88/101 (87%)
 Frame = +3

Query: 162 KYLKPYVLKMHFTNKYVSAQVIHSPTXXXXXXXXXQEKLLRPTMESTRDVAAAAKIGKIL 341
           ++LKPY+L+MHFTNKYVSAQVIH+PT         QEKLLRP MESTRDVAAA KIGK+L
Sbjct: 14  RFLKPYLLRMHFTNKYVSAQVIHTPTSTVACSASSQEKLLRPNMESTRDVAAAVKIGKLL 73

Query: 342 GERLVLKNIPAVSVFLKREQKYHGKVKAVIDSLRDAGVKLL 464
           GERL+LK IPAVS+ +KREQKYHGKVKAVIDS+R+AGVKLL
Sbjct: 74  GERLLLKGIPAVSIHMKREQKYHGKVKAVIDSVREAGVKLL 114


>ref|XP_002512448.1| 50S ribosomal protein L18, putative [Ricinus communis]
           gi|223548409|gb|EEF49900.1| 50S ribosomal protein L18,
           putative [Ricinus communis]
          Length = 115

 Score =  156 bits (395), Expect = 4e-36
 Identities = 77/100 (77%), Positives = 89/100 (89%)
 Frame = +3

Query: 165 YLKPYVLKMHFTNKYVSAQVIHSPTXXXXXXXXXQEKLLRPTMESTRDVAAAAKIGKILG 344
           +LKPYVLKMHFTNK+VSAQVIHSP+         QEK LRP+ME+TRDVAAAAKIGKILG
Sbjct: 16  FLKPYVLKMHFTNKFVSAQVIHSPSATVACSASSQEKALRPSMENTRDVAAAAKIGKILG 75

Query: 345 ERLVLKNIPAVSVFLKREQKYHGKVKAVIDSLRDAGVKLL 464
           ERL++K IPA+SVFLKREQKYHGKVKAV+DS+R++GVKLL
Sbjct: 76  ERLLVKGIPAISVFLKREQKYHGKVKAVVDSVRESGVKLL 115


>ref|XP_002466632.1| hypothetical protein SORBIDRAFT_01g011330 [Sorghum bicolor]
           gi|241920486|gb|EER93630.1| hypothetical protein
           SORBIDRAFT_01g011330 [Sorghum bicolor]
          Length = 114

 Score =  156 bits (394), Expect = 6e-36
 Identities = 78/101 (77%), Positives = 87/101 (86%)
 Frame = +3

Query: 162 KYLKPYVLKMHFTNKYVSAQVIHSPTXXXXXXXXXQEKLLRPTMESTRDVAAAAKIGKIL 341
           K+LKPY+LKMHFTN +VSAQVIH+PT         QEKLLRP+MESTRDVAAAAKIGK+L
Sbjct: 14  KFLKPYILKMHFTNNFVSAQVIHTPTATVTCSASSQEKLLRPSMESTRDVAAAAKIGKLL 73

Query: 342 GERLVLKNIPAVSVFLKREQKYHGKVKAVIDSLRDAGVKLL 464
           GERL+ K IPAVSV + R+QKYHGKVKAVIDSLRDAGVKLL
Sbjct: 74  GERLLFKGIPAVSVSISRDQKYHGKVKAVIDSLRDAGVKLL 114


>ref|NP_001152098.1| 50S ribosomal protein L18 [Zea mays]
           gi|226510381|ref|NP_001150322.1| 50S ribosomal protein
           L18 [Zea mays] gi|195608440|gb|ACG26050.1| 50S ribosomal
           protein L18 [Zea mays] gi|195609138|gb|ACG26399.1| 50S
           ribosomal protein L18 [Zea mays]
           gi|195638354|gb|ACG38645.1| 50S ribosomal protein L18
           [Zea mays] gi|195652601|gb|ACG45768.1| 50S ribosomal
           protein L18 [Zea mays] gi|223943857|gb|ACN26012.1|
           unknown [Zea mays] gi|414588054|tpg|DAA38625.1| TPA: 50S
           ribosomal protein L18 isoform 1 [Zea mays]
           gi|414588055|tpg|DAA38626.1| TPA: 50S ribosomal protein
           L18 isoform 2 [Zea mays]
          Length = 114

 Score =  156 bits (394), Expect = 6e-36
 Identities = 76/101 (75%), Positives = 89/101 (88%)
 Frame = +3

Query: 162 KYLKPYVLKMHFTNKYVSAQVIHSPTXXXXXXXXXQEKLLRPTMESTRDVAAAAKIGKIL 341
           ++LKPY+L+MHF+NKYVSAQV+H+PT         QEKLLRP MESTRDVAAAAKIGK+L
Sbjct: 14  RFLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIGKLL 73

Query: 342 GERLVLKNIPAVSVFLKREQKYHGKVKAVIDSLRDAGVKLL 464
           GERL+LK IPAVS+ +KREQKYHGKVKAVIDS+R+AGVKLL
Sbjct: 74  GERLLLKGIPAVSIHMKREQKYHGKVKAVIDSVREAGVKLL 114


>ref|XP_002283176.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
           gi|296089732|emb|CBI39551.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  155 bits (391), Expect = 1e-35
 Identities = 78/101 (77%), Positives = 88/101 (87%)
 Frame = +3

Query: 162 KYLKPYVLKMHFTNKYVSAQVIHSPTXXXXXXXXXQEKLLRPTMESTRDVAAAAKIGKIL 341
           K+LKPYVLKMHFTNK+V+AQVIHSPT         QEK LR TMESTRDVAAAA IGKIL
Sbjct: 14  KFLKPYVLKMHFTNKFVNAQVIHSPTATVASAASSQEKTLRSTMESTRDVAAAAMIGKIL 73

Query: 342 GERLVLKNIPAVSVFLKREQKYHGKVKAVIDSLRDAGVKLL 464
           GERL+L++IPAV+VFLKR+QKYHGKVKAVIDSLR+ G+KLL
Sbjct: 74  GERLLLQDIPAVTVFLKRDQKYHGKVKAVIDSLREVGIKLL 114


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