BLASTX nr result

ID: Dioscorea21_contig00013020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013020
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vini...   451   e-124
ref|XP_002278327.1| PREDICTED: primary amine oxidase [Vitis vini...   435   e-119
ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vini...   432   e-119
ref|XP_002516777.1| Amine oxidase [copper-containing] precursor,...   429   e-117
ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|2...   429   e-117

>ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera]
            gi|297737034|emb|CBI26235.3| unnamed protein product
            [Vitis vinifera]
          Length = 674

 Score =  451 bits (1160), Expect = e-124
 Identities = 220/374 (58%), Positives = 276/374 (73%), Gaps = 2/374 (0%)
 Frame = +1

Query: 214  SKSHPLDPLTPSELTIIQQTIKTSNLFSSTPLTFHYIGLADIDKHVLLSWLSNTSNS--P 387
            S  HPLD LTPSE   +Q  +  SN  SS  +TF Y+GL + DK  LLSWLSN +++  P
Sbjct: 25   SHHHPLDSLTPSEFRQVQAIVNGSNPGSSHNVTFQYVGLDEPDKPALLSWLSNPNSTTLP 84

Query: 388  PPRRAFIIARSGHQTHELHLDISTKSIISNTIHTGSFFPLLSLEEQITEALNLPFNYTPF 567
            PPRRAF+I R   QTHE+ +D+ST+SI+S+ +++G  +PLL+ EEQ T A  LP  Y PF
Sbjct: 85   PPRRAFVITRLHSQTHEIIVDLSTQSIVSDKVYSGHGYPLLTSEEQ-TAASELPLTYPPF 143

Query: 568  MNSIKKRGLKSSEVVCAGFTVGWFGEVKKSKRLLKILCFAAGDTVNLYARPLEGITIVVD 747
            + SI+KR LK S+VVC+ FTVGWFGE +KS+R+LKILCF    T NLY RP+EG+TIVVD
Sbjct: 144  IASIRKRKLKLSDVVCSTFTVGWFGE-EKSRRVLKILCFYTDGTANLYMRPIEGVTIVVD 202

Query: 748  LDLMEILDYTDRFVVPVPVAGGTDYRSKKQKPPFGPRGKPVTVVQPEGKGFSIDGHSISW 927
            LD M+I +Y DR  VP+P A GT+YR  KQKPPFGPR   V+ +QP+G GF IDGH+I W
Sbjct: 203  LDEMKITEYHDRLTVPMPEAEGTEYRLSKQKPPFGPRLNGVSSMQPDGPGFKIDGHNIRW 262

Query: 928  ANWKFHLSYDARAGAVISLASVQEHDNELHRLVLYKGYISELFVPYQDPAKEWYFRTFFD 1107
            ANW FH+S+DARAG +ISLAS+ +      R VLY+GY+SELFVPY DP +EWY++TFFD
Sbjct: 263  ANWDFHVSFDARAGLIISLASIYDLQKRTFRRVLYRGYLSELFVPYMDPTEEWYYKTFFD 322

Query: 1108 VGEYGFGLLAASLQPLTDCPDNAEFLDGYYATQNGSIVMIKNVFCVFERYSGDSAWRHTE 1287
            +GE+GFGL    LQPL DCP NA F+DGYYA Q+G  V I N FC+FE+ +G   WRHTE
Sbjct: 323  LGEFGFGLCTVPLQPLADCPSNAVFMDGYYAGQDGKPVKISNAFCIFEQQAGRIMWRHTE 382

Query: 1288 HDILGKTITEVRPE 1329
             +I G+ I EVRPE
Sbjct: 383  VEIPGEEIREVRPE 396


>ref|XP_002278327.1| PREDICTED: primary amine oxidase [Vitis vinifera]
            gi|297737038|emb|CBI26239.3| unnamed protein product
            [Vitis vinifera]
          Length = 676

 Score =  435 bits (1119), Expect = e-119
 Identities = 211/370 (57%), Positives = 271/370 (73%), Gaps = 1/370 (0%)
 Frame = +1

Query: 223  HPLDPLTPSELTIIQQTIKTSNLFSSTPLTFHYIGLADIDKHVLLSWLSN-TSNSPPPRR 399
            HPLDPLT  EL  ++  I  S+      LTFHY+GL + DK +++SWL++ T+   PPRR
Sbjct: 30   HPLDPLTLQELDQVRTIITASH----HNLTFHYVGLDEPDKSIVVSWLAHRTTAKTPPRR 85

Query: 400  AFIIARSGHQTHELHLDISTKSIISNTIHTGSFFPLLSLEEQITEALNLPFNYTPFMNSI 579
            A +IAR  HQTH+  +D+ST SI+S+ I++GS FP+L+ EEQ T A +L   + PF  S+
Sbjct: 86   ALVIARLNHQTHQFIVDLSTHSIVSDEIYSGSGFPMLTFEEQ-TAANSLALTHAPFRASV 144

Query: 580  KKRGLKSSEVVCAGFTVGWFGEVKKSKRLLKILCFAAGDTVNLYARPLEGITIVVDLDLM 759
             +RGLK  E+V   +TVGW+GE   S+R++K++      TVNLY RP+EGIT+ VDLD M
Sbjct: 145  GRRGLKMEEIVGLSYTVGWYGEEGTSRRIVKVMFCYLDGTVNLYMRPIEGITVTVDLDEM 204

Query: 760  EILDYTDRFVVPVPVAGGTDYRSKKQKPPFGPRGKPVTVVQPEGKGFSIDGHSISWANWK 939
            +++ Y DR +VPVP A GTD+R  KQKPPFGPR K +TVVQP+G  F+I GH ISWANW 
Sbjct: 205  KVIAYHDRLMVPVPKADGTDFRESKQKPPFGPRLKGITVVQPDGPSFTIHGHQISWANWD 264

Query: 940  FHLSYDARAGAVISLASVQEHDNELHRLVLYKGYISELFVPYQDPAKEWYFRTFFDVGEY 1119
            FHL++D RAG +IS+AS+ + + +  R VLY+GYISELFVPY D  +EWYFRTFFD GEY
Sbjct: 265  FHLAFDMRAGPIISVASIYDVEKKEQRRVLYRGYISELFVPYMDLTEEWYFRTFFDAGEY 324

Query: 1120 GFGLLAASLQPLTDCPDNAEFLDGYYATQNGSIVMIKNVFCVFERYSGDSAWRHTEHDIL 1299
            GFGL A  LQPLTDCP+NA F+DGY   QNG+ V + NVFC+FERY+GD  WRHTE +I 
Sbjct: 325  GFGLCAMPLQPLTDCPENAVFMDGYVTGQNGTPVNMTNVFCIFERYAGDIMWRHTEAEIP 384

Query: 1300 GKTITEVRPE 1329
            GK ITE RPE
Sbjct: 385  GKLITESRPE 394


>ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera]
            gi|297737032|emb|CBI26233.3| unnamed protein product
            [Vitis vinifera]
          Length = 667

 Score =  432 bits (1112), Expect = e-119
 Identities = 212/374 (56%), Positives = 271/374 (72%), Gaps = 2/374 (0%)
 Frame = +1

Query: 214  SKSHPLDPLTPSELTIIQQTIKTSNLFSSTPLTFHYIGLADIDKHVLLSWLSNTSNS--P 387
            S+ HPLD LTPSE   +Q  +K SN  SS  +TF Y+GL + DK ++LSWLSN +++  P
Sbjct: 20   SQYHPLDSLTPSEFHQVQAIVKGSNPGSSLNMTFQYVGLDEPDKSIVLSWLSNPNSTTPP 79

Query: 388  PPRRAFIIARSGHQTHELHLDISTKSIISNTIHTGSFFPLLSLEEQITEALNLPFNYTPF 567
            PPRRAF+I R   QTHE+ +D+ST+SIIS+ ++ G  +PLL+ EEQ T A  LP  Y PF
Sbjct: 80   PPRRAFVITRLHSQTHEIIVDLSTQSIISDEVYGGHGYPLLTSEEQ-TAASVLPLTYPPF 138

Query: 568  MNSIKKRGLKSSEVVCAGFTVGWFGEVKKSKRLLKILCFAAGDTVNLYARPLEGITIVVD 747
            + SI KR LK S+VVC+ FTVGWFGE  KS+R+LKI CF    T NLY RP+EG+TIVVD
Sbjct: 139  IASITKRSLKLSDVVCSTFTVGWFGE-DKSRRVLKIPCFYTDGTANLYMRPIEGVTIVVD 197

Query: 748  LDLMEILDYTDRFVVPVPVAGGTDYRSKKQKPPFGPRGKPVTVVQPEGKGFSIDGHSISW 927
            LD M+I++Y DR +VPVP A GT+ R  KQ PPFGP    V+ + P+G GF IDGH++ W
Sbjct: 198  LDDMKIIEYYDRLMVPVPEAEGTECRLSKQNPPFGPPLNGVSAMPPDGPGFKIDGHNVRW 257

Query: 928  ANWKFHLSYDARAGAVISLASVQEHDNELHRLVLYKGYISELFVPYQDPAKEWYFRTFFD 1107
            ANW FH+S+DARAG +ISLAS+ +      R VLY+G++SELFVPY DP +EWY+RT+FD
Sbjct: 258  ANWDFHISFDARAGLIISLASIYDLQKGTFRQVLYRGHVSELFVPYMDPTEEWYYRTYFD 317

Query: 1108 VGEYGFGLLAASLQPLTDCPDNAEFLDGYYATQNGSIVMIKNVFCVFERYSGDSAWRHTE 1287
             GE+G G+    LQP+ DCP NA F DGYYA+Q+G  + I N FCV+E+ +G   WRHTE
Sbjct: 318  EGEFGLGICTVPLQPMLDCPPNAVFTDGYYASQDGKPMSISNAFCVYEQEAGRIMWRHTE 377

Query: 1288 HDILGKTITEVRPE 1329
             DI G+ I EVRPE
Sbjct: 378  TDIPGEEIKEVRPE 391


>ref|XP_002516777.1| Amine oxidase [copper-containing] precursor, putative [Ricinus
            communis] gi|223543865|gb|EEF45391.1| Amine oxidase
            [copper-containing] precursor, putative [Ricinus
            communis]
          Length = 666

 Score =  429 bits (1102), Expect = e-117
 Identities = 201/370 (54%), Positives = 266/370 (71%), Gaps = 1/370 (0%)
 Frame = +1

Query: 223  HPLDPLTPSELTIIQQTIKTSNLFSSTPL-TFHYIGLADIDKHVLLSWLSNTSNSPPPRR 399
            HPLDPL+P ELT++Q  ++ S   ++T L TFHY+G  + +K ++LSWLSN    PPPRR
Sbjct: 30   HPLDPLSPKELTLVQAIVRNSLSATNTSLVTFHYVGFDEPEKPLILSWLSNPETKPPPRR 89

Query: 400  AFIIARSGHQTHELHLDISTKSIISNTIHTGSFFPLLSLEEQITEALNLPFNYTPFMNSI 579
            A  I R   QTHE  +D+ST SI+   ++    +P L+ +EQ+  A  LP  Y PF+ S+
Sbjct: 90   ALAITRYNKQTHEFIVDLSTSSIVGTQVYNDYGYPTLAADEQVA-ANELPLTYGPFIESV 148

Query: 580  KKRGLKSSEVVCAGFTVGWFGEVKKSKRLLKILCFAAGDTVNLYARPLEGITIVVDLDLM 759
            K RGL  S VVC+ FTVGWFG+   ++R++K+ CF   DT+NLY  P+EGI IVVDLD M
Sbjct: 149  KSRGLNLSAVVCSTFTVGWFGK-DVNRRVVKVQCFHMNDTINLYLLPIEGIKIVVDLDEM 207

Query: 760  EILDYTDRFVVPVPVAGGTDYRSKKQKPPFGPRGKPVTVVQPEGKGFSIDGHSISWANWK 939
            +I++Y D   VPVP + GTDYR  KQKPP GPR     ++QP+G GF IDGH+I W NW 
Sbjct: 208  KIVEYNDNEKVPVPNSEGTDYRLSKQKPPLGPRINRAAILQPDGPGFQIDGHTIKWLNWV 267

Query: 940  FHLSYDARAGAVISLASVQEHDNELHRLVLYKGYISELFVPYQDPAKEWYFRTFFDVGEY 1119
            FH+++DAR G VISLAS+ + +   HR VLY+G+ISELFVPYQDP +++YF+TFFD GE+
Sbjct: 268  FHIAFDARVGPVISLASIYDQEKHKHRSVLYRGHISELFVPYQDPTQDYYFKTFFDCGEF 327

Query: 1120 GFGLLAASLQPLTDCPDNAEFLDGYYATQNGSIVMIKNVFCVFERYSGDSAWRHTEHDIL 1299
            GFGL A SL PL DCP+NA ++DGY+A Q+G+ V + N+FC+FER++GD  WRHTE  I 
Sbjct: 328  GFGLSAVSLAPLADCPNNAVYMDGYHAGQDGTPVQVPNLFCIFERHAGDIMWRHTELGIP 387

Query: 1300 GKTITEVRPE 1329
             +TITE RPE
Sbjct: 388  DETITEARPE 397


>ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|222852347|gb|EEE89894.1|
            predicted protein [Populus trichocarpa]
          Length = 668

 Score =  429 bits (1102), Expect = e-117
 Identities = 203/370 (54%), Positives = 265/370 (71%)
 Frame = +1

Query: 220  SHPLDPLTPSELTIIQQTIKTSNLFSSTPLTFHYIGLADIDKHVLLSWLSNTSNSPPPRR 399
            +HPLDPLTP+E T IQ  +  S   S+  + FHY+GL +  K  +LSWL  T+   PPR+
Sbjct: 23   THPLDPLTPTEFTKIQSIVHNSYPKSNHSIAFHYVGLEEPTKTAILSWLEGTATRTPPRQ 82

Query: 400  AFIIARSGHQTHELHLDISTKSIISNTIHTGSFFPLLSLEEQITEALNLPFNYTPFMNSI 579
            AFIIAR    THE+  D+S ++I+S+ ++ G  +PLL+ EEQ T A  LPF YTPF+ SI
Sbjct: 83   AFIIARINQITHEIIADLSVRNIVSDRVYGGYGYPLLTFEEQGT-ANALPFKYTPFLESI 141

Query: 580  KKRGLKSSEVVCAGFTVGWFGEVKKSKRLLKILCFAAGDTVNLYARPLEGITIVVDLDLM 759
            +KRGLK  EVVC  F +GW+GE +++KR++++LC     TVNLY RP+EGIT+ VDL+ M
Sbjct: 142  RKRGLKVEEVVCTSFAIGWYGEKRRNKRVVRVLCNYLDGTVNLYMRPIEGITVTVDLEEM 201

Query: 760  EILDYTDRFVVPVPVAGGTDYRSKKQKPPFGPRGKPVTVVQPEGKGFSIDGHSISWANWK 939
            +IL + DR  VP+P A GTDYR   QKPPFG   K +++ Q +G  F+IDGH+I WANW 
Sbjct: 202  KILGFKDRSTVPMPKADGTDYRESSQKPPFGSPLKGISMHQSDGPSFTIDGHAIRWANWD 261

Query: 940  FHLSYDARAGAVISLASVQEHDNELHRLVLYKGYISELFVPYQDPAKEWYFRTFFDVGEY 1119
            FHLS+DARAG VISLAS+ +   +  R VLY+G++SE+FVPY D  +EWY+R FFD GEY
Sbjct: 262  FHLSFDARAGPVISLASIFDLQKQKFRKVLYQGFLSEVFVPYMDLNEEWYYRVFFDAGEY 321

Query: 1120 GFGLLAASLQPLTDCPDNAEFLDGYYATQNGSIVMIKNVFCVFERYSGDSAWRHTEHDIL 1299
            G+GL A  L+PL DCP+NA F+D Y A  NG+ V + N+FC+FERY+GD  WRHTE  I 
Sbjct: 322  GYGLCAVPLEPLRDCPENAVFMDAYVADHNGTPVNMPNIFCIFERYAGDVMWRHTEAAIP 381

Query: 1300 GKTITEVRPE 1329
            GK I EVRPE
Sbjct: 382  GKVIREVRPE 391


Top