BLASTX nr result

ID: Dioscorea21_contig00013015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013015
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002456390.1| hypothetical protein SORBIDRAFT_03g035340 [S...   250   5e-64
emb|CBI15323.3| unnamed protein product [Vitis vinifera]              235   1e-59
ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial...   235   1e-59
ref|NP_001144703.1| uncharacterized protein LOC100277739 [Zea ma...   234   2e-59
gb|AFW84998.1| hypothetical protein ZEAMMB73_057083 [Zea mays]        233   8e-59

>ref|XP_002456390.1| hypothetical protein SORBIDRAFT_03g035340 [Sorghum bicolor]
            gi|241928365|gb|EES01510.1| hypothetical protein
            SORBIDRAFT_03g035340 [Sorghum bicolor]
          Length = 328

 Score =  250 bits (638), Expect = 5e-64
 Identities = 136/252 (53%), Positives = 172/252 (68%), Gaps = 4/252 (1%)
 Frame = +3

Query: 258  LTRTRFSVSLESVVDQGLQSLRASLQRRSFDPRRLFSSP---RSFWGYALPTPEGAVLSL 428
            + RT  S  L +    G   L +  +RR     +L SSP    + W Y + +P+ AV  L
Sbjct: 78   VARTAASRWLAAARGSGSLDLFSLQRRRRASWWQLSSSPFLQGAPWAYWMESPDSAVWML 137

Query: 429  IGANVAVFFLWRIADPSFMRRHFMISLDNFKSGRWHTLITSAFSHADLDHLVTNMIGLYF 608
            IGANVAVF LWR+ADP FMRRHFMISLDN KSGR HTL+T+AFSHA+ +HL  NMIGLYF
Sbjct: 138  IGANVAVFMLWRVADPGFMRRHFMISLDNLKSGRLHTLLTNAFSHAESNHLFANMIGLYF 197

Query: 609  FGTSISRLFGPEFXXXXXXXXXXXXSIFFLLHGAIAASSSESLQRWHTSRIAGLGASAAV 788
            FG +I+ +FGP F            S+FFLL  A  A   +  + W TSR+AGLGASAAV
Sbjct: 198  FGNNIANVFGPAFLLKLYVGGALTGSVFFLLEKAFLAHRKQDYEGWDTSRVAGLGASAAV 257

Query: 789  NSIILLDIFLFPKNIYYVNLIIPVPAMLMGAILIGSDLWRIKKGDEHISGSAHLGGAVVA 968
            N+ ILL IFL+PK + Y+  +IPVPA LMGA +IG+DL R+K+  E +SGSAHLGGA+VA
Sbjct: 258  NATILLQIFLYPKGLVYLYFLIPVPAALMGAAIIGADLLRLKRHGE-VSGSAHLGGALVA 316

Query: 969  AIVFARL-KHWI 1001
            A+++AR+ K WI
Sbjct: 317  ALMWARIRKGWI 328


>emb|CBI15323.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  235 bits (600), Expect = 1e-59
 Identities = 133/256 (51%), Positives = 163/256 (63%), Gaps = 4/256 (1%)
 Frame = +3

Query: 237 PNVSKWVLTRTRFSVSLESVVDQGLQSLRASLQRRSFDPRRLFSSPRSFWGYALP--TPE 410
           P + K  L       S +++    +  LRA   RRSF     F S    W   L   +  
Sbjct: 104 PTLLKQFLPTALLKGSSKTLAASRVGFLRAQFPRRSFGFSPSFDSYGRRWRSWLSGLSTN 163

Query: 411 GAVLSLIGANVAVFFLWRIADPSFMRRHFMISLDNFKSGRWHTLITSAFSHADLDHLVTN 590
             VL LI ANVAVF LWRI+D  FM  +F ISLDNFKSGR HTLITSAFSH D+ HL++N
Sbjct: 164 DVVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTLITSAFSHIDIGHLISN 223

Query: 591 MIGLYFFGTSISRLFGPEFXXXXXXXXXXXXSIFFLLHGAIAASSSESLQRW--HTSRIA 764
           MIGLYFFG +I R+FGPEF            S+F+L+H A  A SS+  Q W  + S I 
Sbjct: 224 MIGLYFFGMNIGRVFGPEFLLKLYLAGAVVGSVFYLVHHAFMAPSSKGQQMWSINPSAIP 283

Query: 765 GLGASAAVNSIILLDIFLFPKNIYYVNLIIPVPAMLMGAILIGSDLWRIKKGDEHISGSA 944
           GLGAS AVN+I+LLDIFLFP++  Y+   IPVPA+L+G  LIG D+ RI +GD+ ISGSA
Sbjct: 284 GLGASGAVNAIMLLDIFLFPRSTLYLEFFIPVPAILLGIFLIGKDMLRIIEGDDQISGSA 343

Query: 945 HLGGAVVAAIVFARLK 992
           HLGGA VAAI + RL+
Sbjct: 344 HLGGAAVAAIAWTRLR 359


>ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial [Vitis vinifera]
          Length = 333

 Score =  235 bits (600), Expect = 1e-59
 Identities = 133/256 (51%), Positives = 163/256 (63%), Gaps = 4/256 (1%)
 Frame = +3

Query: 237 PNVSKWVLTRTRFSVSLESVVDQGLQSLRASLQRRSFDPRRLFSSPRSFWGYALP--TPE 410
           P + K  L       S +++    +  LRA   RRSF     F S    W   L   +  
Sbjct: 75  PTLLKQFLPTALLKGSSKTLAASRVGFLRAQFPRRSFGFSPSFDSYGRRWRSWLSGLSTN 134

Query: 411 GAVLSLIGANVAVFFLWRIADPSFMRRHFMISLDNFKSGRWHTLITSAFSHADLDHLVTN 590
             VL LI ANVAVF LWRI+D  FM  +F ISLDNFKSGR HTLITSAFSH D+ HL++N
Sbjct: 135 DVVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTLITSAFSHIDIGHLISN 194

Query: 591 MIGLYFFGTSISRLFGPEFXXXXXXXXXXXXSIFFLLHGAIAASSSESLQRW--HTSRIA 764
           MIGLYFFG +I R+FGPEF            S+F+L+H A  A SS+  Q W  + S I 
Sbjct: 195 MIGLYFFGMNIGRVFGPEFLLKLYLAGAVVGSVFYLVHHAFMAPSSKGQQMWSINPSAIP 254

Query: 765 GLGASAAVNSIILLDIFLFPKNIYYVNLIIPVPAMLMGAILIGSDLWRIKKGDEHISGSA 944
           GLGAS AVN+I+LLDIFLFP++  Y+   IPVPA+L+G  LIG D+ RI +GD+ ISGSA
Sbjct: 255 GLGASGAVNAIMLLDIFLFPRSTLYLEFFIPVPAILLGIFLIGKDMLRIIEGDDQISGSA 314

Query: 945 HLGGAVVAAIVFARLK 992
           HLGGA VAAI + RL+
Sbjct: 315 HLGGAAVAAIAWTRLR 330


>ref|NP_001144703.1| uncharacterized protein LOC100277739 [Zea mays]
            gi|195646010|gb|ACG42473.1| hypothetical protein [Zea
            mays]
          Length = 328

 Score =  234 bits (598), Expect = 2e-59
 Identities = 125/222 (56%), Positives = 153/222 (68%), Gaps = 1/222 (0%)
 Frame = +3

Query: 339  RSFDPRRLFSSPRSFWGYALPTPEGAVLSLIGANVAVFFLWRIADPSFMRRHFMISLDNF 518
            R F P        + W   + + +GAV  LIGANVAVF LWR+ADP FMR+HFMISLDNF
Sbjct: 110  RQFSPSPFLQG--ATWASWMESADGAVWMLIGANVAVFLLWRVADPGFMRKHFMISLDNF 167

Query: 519  KSGRWHTLITSAFSHADLDHLVTNMIGLYFFGTSISRLFGPEFXXXXXXXXXXXXSIFFL 698
            KSGR HTL+TSAFSHA+ +HL  NM GL+FFG+SI+ +FGP F            S+FFL
Sbjct: 168  KSGRLHTLLTSAFSHAEFNHLFANMFGLFFFGSSITNVFGPAFLLKLYVGGALTGSVFFL 227

Query: 699  LHGAIAASSSESLQRWHTSRIAGLGASAAVNSIILLDIFLFPKNIYYVNLIIPVPAMLMG 878
            L  A  A   +    W TSR A LGASAAVN+ +LL IFL+PK + Y+  +IPVPA LMG
Sbjct: 228  LEKAFLAYRKQDYVGWDTSRAAELGASAAVNATMLLQIFLYPKGLVYIYFVIPVPAALMG 287

Query: 879  AILIGSDLWRIKKGDEHISGSAHLGGAVVAAIVFARL-KHWI 1001
            A LIG+DL R+ KG   +SGSA LGGA+VAA+V+AR+ K WI
Sbjct: 288  AGLIGADLVRL-KGHGDVSGSAPLGGALVAALVWARIRKGWI 328


>gb|AFW84998.1| hypothetical protein ZEAMMB73_057083 [Zea mays]
          Length = 328

 Score =  233 bits (593), Expect = 8e-59
 Identities = 125/223 (56%), Positives = 154/223 (69%), Gaps = 2/223 (0%)
 Frame = +3

Query: 339  RSFDPRRLFSSPRSFWGYALPTPEGAVLSLIGANVAVFFLWRIADPSFMRRHFMISLDNF 518
            R F P        + W   + + +GAV  LIGANVAVF LWR+ADP FMR+HFMISLDNF
Sbjct: 110  RQFSPSPFLQG--ATWASWMESADGAVWMLIGANVAVFLLWRVADPGFMRKHFMISLDNF 167

Query: 519  KSGRWHTLITSAFSHADLDHLVTNMIGLYFFGTSISRLFGPEFXXXXXXXXXXXXSIFFL 698
            KSGR HTL+TSAFSHA+ +HL  NM GL+FFG+SI+ +FGP F            S+FFL
Sbjct: 168  KSGRLHTLLTSAFSHAEFNHLFANMFGLFFFGSSITNVFGPAFLLKLYVGGALTGSVFFL 227

Query: 699  LHGAIAASSSESLQRWHTSRIAGLGASAAVNSIILLDIFLFPKNIYYVNLIIPVPAMLMG 878
            L  A  A   +    W TSR A LGASAAVN+ +LL IFL+PK + Y+  +IPVPA LMG
Sbjct: 228  LEKAFLAYRKQDYVGWDTSRAAELGASAAVNATMLLQIFLYPKGLVYIYFVIPVPAALMG 287

Query: 879  AILIGSDLWRIKK-GDEHISGSAHLGGAVVAAIVFARL-KHWI 1001
            A LIG+DL R+K+ GD  +SGSA LGGA+ AA+V+AR+ K WI
Sbjct: 288  AGLIGADLVRLKRHGD--VSGSAPLGGALAAALVWARIRKGWI 328


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