BLASTX nr result

ID: Dioscorea21_contig00012997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012997
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS28673.1| putative 2-C-methyl-D-erythritol 2,4-cyclodiphosp...    85   3e-28
gb|AFS28674.1| putative 2-C-methyl-D-erythritol 2,4-cyclodiphosp...    84   4e-28
gb|ABB88837.2| 4-diphosphocytidyl-2-C-methyl-D-erythritol syntha...    85   9e-28
gb|ACI16377.1| 4-diphosphocytidyl-methylerythritol 2-phosphate s...    83   9e-28
dbj|BAF98291.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltra...    83   9e-28

>gb|AFS28673.1| putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,
           partial [Olea europaea]
          Length = 277

 Score = 84.7 bits (208), Expect(2) = 3e-28
 Identities = 39/45 (86%), Positives = 44/45 (97%)
 Frame = -1

Query: 356 VKTLNRKALWEMQTPQVIKPDVLKRGFELVNKEGLEVTDDVSIVE 222
           VKTL+RK LWEMQTPQVIKPD+LK+GFELVN+EGLEVTDDVSI+E
Sbjct: 193 VKTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIIE 237



 Score = 65.5 bits (158), Expect(2) = 3e-28
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = -3

Query: 138 LKHPVYITEGSYTNIKVTTPDDLLVAERILNMKAGVLA 25
           LKHPVYITEGSYTNIKVTTPDDLL+AERILN    V A
Sbjct: 239 LKHPVYITEGSYTNIKVTTPDDLLLAERILNPATAVPA 276


>gb|AFS28674.1| putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,
           partial [Olea europaea]
          Length = 277

 Score = 84.3 bits (207), Expect(2) = 4e-28
 Identities = 39/45 (86%), Positives = 44/45 (97%)
 Frame = -1

Query: 356 VKTLNRKALWEMQTPQVIKPDVLKRGFELVNKEGLEVTDDVSIVE 222
           VKTL+RK LWEMQTPQVIKPD+LK+GFELVN+EGLEVTDDVSI+E
Sbjct: 193 VKTLDRKMLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIIE 237



 Score = 65.5 bits (158), Expect(2) = 4e-28
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = -3

Query: 138 LKHPVYITEGSYTNIKVTTPDDLLVAERILNMKAGVLA 25
           LKHPVYITEGSYTNIKVTTPDDLL+AERILN    V A
Sbjct: 239 LKHPVYITEGSYTNIKVTTPDDLLLAERILNPATAVPA 276


>gb|ABB88837.2| 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase [Stevia
           rebaudiana]
          Length = 317

 Score = 85.1 bits (209), Expect(2) = 9e-28
 Identities = 40/45 (88%), Positives = 44/45 (97%)
 Frame = -1

Query: 356 VKTLNRKALWEMQTPQVIKPDVLKRGFELVNKEGLEVTDDVSIVE 222
           VKTL+RK LWEMQTPQVIKPD+LK+GFELVN+EGLEVTDDVSIVE
Sbjct: 234 VKTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVE 278



 Score = 63.5 bits (153), Expect(2) = 9e-28
 Identities = 29/31 (93%), Positives = 31/31 (100%)
 Frame = -3

Query: 138 LKHPVYITEGSYTNIKVTTPDDLLVAERILN 46
           LKHPVYIT+GSYTNIKVTTPDDLL+AERILN
Sbjct: 280 LKHPVYITQGSYTNIKVTTPDDLLLAERILN 310


>gb|ACI16377.1| 4-diphosphocytidyl-methylerythritol 2-phosphate synthase
           [Catharanthus roseus]
          Length = 311

 Score = 82.8 bits (203), Expect(2) = 9e-28
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = -1

Query: 356 VKTLNRKALWEMQTPQVIKPDVLKRGFELVNKEGLEVTDDVSIVE 222
           VKTL+RK LWEMQTPQVIKPD+LK+GFELVN+E LEVTDDVSIVE
Sbjct: 231 VKTLDRKTLWEMQTPQVIKPDLLKKGFELVNRENLEVTDDVSIVE 275



 Score = 65.9 bits (159), Expect(2) = 9e-28
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -3

Query: 138 LKHPVYITEGSYTNIKVTTPDDLLVAERILN 46
           LKHPVYITEGSYTNIKVTTPDDLLVAERILN
Sbjct: 277 LKHPVYITEGSYTNIKVTTPDDLLVAERILN 307


>dbj|BAF98291.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea
           brasiliensis]
          Length = 311

 Score = 82.8 bits (203), Expect(2) = 9e-28
 Identities = 38/45 (84%), Positives = 44/45 (97%)
 Frame = -1

Query: 356 VKTLNRKALWEMQTPQVIKPDVLKRGFELVNKEGLEVTDDVSIVE 222
           V+TL+RK LWEMQTPQVIKPD+LK+GFELVN++GLEVTDDVSIVE
Sbjct: 227 VRTLDRKTLWEMQTPQVIKPDLLKKGFELVNRDGLEVTDDVSIVE 271



 Score = 65.9 bits (159), Expect(2) = 9e-28
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = -3

Query: 138 LKHPVYITEGSYTNIKVTTPDDLLVAERILNMKA 37
           LKHPVYITEGSYTNIKVTTPDDLL+AERILN+ +
Sbjct: 273 LKHPVYITEGSYTNIKVTTPDDLLLAERILNLNS 306


Top