BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012966
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW65388.1| putative RING zinc finger domain superfamily prot...   289   6e-76
ref|XP_003577795.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   287   2e-75
gb|AAX95797.1| At1g47570 [Oryza sativa Japonica Group] gi|775489...   283   2e-74
gb|AFW65389.1| putative RING zinc finger domain superfamily prot...   276   3e-72
gb|AFW65387.1| putative RING zinc finger domain superfamily prot...   275   9e-72

>gb|AFW65388.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 475

 Score =  289 bits (739), Expect = 6e-76
 Identities = 148/272 (54%), Positives = 188/272 (69%), Gaps = 11/272 (4%)
 Frame = +1

Query: 25  EAGQCSGAKEEHDP---------WAKLVPLIPGYQEVQISSEDPVVCSQTALS-SAEKLP 174
           +AG+CS +K              WA+LVP       V+++ +D VVCS  A     E++ 
Sbjct: 2   DAGECSTSKPPQPSAASPSSPTVWARLVPADSACPTVEVAEDDSVVCSLVAPPCGGEEVA 61

Query: 175 WCEINWDS-DRGLATIRNTSLAAILVDGAILEVSEELDIESGIEIVSGPKLEGYLSYTFQ 351
           WCEI  ++ D   ATIRN S  AI+VDG I+E  E +DI+ G EIVSGP+ EG+L YTF+
Sbjct: 62  WCEIRRNAGDASSATIRNLSSDAIIVDGRIVE-QECVDIKPGSEIVSGPQKEGHLIYTFE 120

Query: 352 VIFTEEPDSRNLKILLDVELAKCSICLNIWHDVVTVSPCFHNFCNGCFSEWLRRASCRPH 531
           +   E+ + +N+KI+LD+E AKCSICLN+WHDVVTV+PC HNFCNGCFSEWLRR+S    
Sbjct: 121 ITEAEDHEKKNVKIVLDIENAKCSICLNLWHDVVTVAPCLHNFCNGCFSEWLRRSSSNSR 180

Query: 532 IIPKDIACPQCRAVVHSVGRNHFLHNIEEAILQTFSSLKRPAEEVQLLDSHASIKSNLVL 711
              +  ACPQCR  V SVGRNHFLHNIEEAILQ FSSL+R  EE+ LL+S+AS+KSN+VL
Sbjct: 181 DKSQSAACPQCRTTVQSVGRNHFLHNIEEAILQAFSSLQRSDEEIALLESYASVKSNMVL 240

Query: 712 GSEKKTSRKRPLSLSNDGINGIDVPCPQCGTE 807
           G +K  SRKR  S S+D  +  D+PCPQC  E
Sbjct: 241 GQQKNQSRKRRFSRSSDDTDNSDLPCPQCRNE 272


>ref|XP_003577795.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           CHFR-like [Brachypodium distachyon]
          Length = 500

 Score =  287 bits (734), Expect = 2e-75
 Identities = 150/298 (50%), Positives = 189/298 (63%), Gaps = 37/298 (12%)
 Frame = +1

Query: 25  EAGQCSGAKEEHDP---WAKLVPLIPGYQEVQISSEDPVVCSQTALSSA----EKLPWCE 183
           ++G+CS +K        WAKLVP    Y EV ++ +D VVCS  A + A    E+L WCE
Sbjct: 2   DSGECSNSKPPAPTTGVWAKLVPTDSAYPEVAVAEDDAVVCSLVAPAGAAGAGEELSWCE 61

Query: 184 INWDSDRGLATIRNTSLAAILVDGAILEVSEELDIESGIEIVSGPKLEGYLSYTFQVIFT 363
           I    D   ATIRN S  AI+VDG +++  E +DI+ G +IV GP+ EG+L YTF +   
Sbjct: 62  IRRGGDASSATIRNLSSDAIIVDGRVIQ-QEVVDIKPGSQIVPGPQKEGHLVYTFDITAA 120

Query: 364 EEPDSRNLKILLDVELAKCSICLNIWHDVVTVSPCFHNFCNGCFSEWLRRASCRPHIIPK 543
           ++ D  N+KI+LD+E AKCSICLN+WHDVVTV+PCFHNFCNGCFSEWLRR+S       +
Sbjct: 121 KDHDKNNVKIVLDIENAKCSICLNLWHDVVTVAPCFHNFCNGCFSEWLRRSSTNSRDKSQ 180

Query: 544 DIACPQCRAVVHSVGRNHFLHNIEEAILQTFSSLKRPAEEVQLLDSHASIKSNL------ 705
             ACPQCR  V SVGRNHFLHNIEEAILQ FSSL+R  EE+ +L+S+AS+KSNL      
Sbjct: 181 SAACPQCRTAVQSVGRNHFLHNIEEAILQAFSSLQRSDEEIAMLESYASVKSNLVSSNFK 240

Query: 706 ------------------------VLGSEKKTSRKRPLSLSNDGINGIDVPCPQCGTE 807
                                   VLG +K  SRKRPL   +D  +  ++PCPQCGTE
Sbjct: 241 TLPKQLLVSTVFXTHLSSNACPAEVLGKQKNQSRKRPLPRPSDESDDSELPCPQCGTE 298


>gb|AAX95797.1| At1g47570 [Oryza sativa Japonica Group] gi|77548913|gb|ABA91710.1|
           Zinc finger, C3HC4 type family protein, expressed [Oryza
           sativa Japonica Group] gi|215678703|dbj|BAG95140.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 478

 Score =  283 bits (725), Expect = 2e-74
 Identities = 149/276 (53%), Positives = 185/276 (67%), Gaps = 15/276 (5%)
 Frame = +1

Query: 25  EAGQCSGAKE--EHDP------WAKLVPLIPGYQEVQISSEDPVVCSQ-TALSSAEKLPW 177
           +AG+CS ++      P      WAKLVP    + EV+++ +D VVCS+ T     E   W
Sbjct: 2   DAGECSSSQPCASSSPDAAGGVWAKLVPSDSAFPEVELAEDDAVVCSRVTPDGGGEVAAW 61

Query: 178 CEIN---WDSDRGLATIRNTSLAAILVDGAILEVSEELDIESGIEIVSGPKLEGYLSYTF 348
           CEI     D D   ATIRN S  AI+VDG +++  E +DI+ G EIVSGP+ +G+L YTF
Sbjct: 62  CEIRRGGGDGDASSATIRNLSSDAIIVDGRVIQ-QEAVDIKPGSEIVSGPQKDGHLLYTF 120

Query: 349 QVIFTEEPDSRNLKILLDVELAKCSICLNIWHDVVTVSPCFHNFCNGCFSEWLRRASCRP 528
            +    + D  N+KI+LD+E AKCSICLN+WHDVVTV+PC HNFCNGCFSEWLRR+S   
Sbjct: 121 DITGLNDQDKTNIKIVLDIENAKCSICLNLWHDVVTVAPCLHNFCNGCFSEWLRRSSANS 180

Query: 529 HIIPKDIACPQCRAVVHSVGRNHFLHNIEEAILQTFSSLKRPAEEVQLLDSHASIKSNLV 708
               +  ACPQCR  V SVGRNHFLHNIEEAILQ FSSL+R  EE+ LL+S+AS+K+N+V
Sbjct: 181 RDKSQSAACPQCRTAVQSVGRNHFLHNIEEAILQAFSSLQRSDEEIALLESYASVKTNIV 240

Query: 709 LGSEKKTSRKRPLSLSND---GINGIDVPCPQCGTE 807
           LG +K  SRKR L  SND     N  D  CPQCG E
Sbjct: 241 LGKQKIQSRKRRLPRSNDEANHTNHADFLCPQCGAE 276


>gb|AFW65389.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 470

 Score =  276 bits (707), Expect = 3e-72
 Identities = 145/272 (53%), Positives = 184/272 (67%), Gaps = 11/272 (4%)
 Frame = +1

Query: 25  EAGQCSGAKEEHDP---------WAKLVPLIPGYQEVQISSEDPVVCSQTALS-SAEKLP 174
           +AG+CS +K              WA+LVP       V+++ +D VVCS  A     E++ 
Sbjct: 2   DAGECSTSKPPQPSAASPSSPTVWARLVPADSACPTVEVAEDDSVVCSLVAPPCGGEEVA 61

Query: 175 WCEINWDS-DRGLATIRNTSLAAILVDGAILEVSEELDIESGIEIVSGPKLEGYLSYTFQ 351
           WCEI  ++ D   ATIRN S  AI+VDG I+E  E +DI+ G EIVSGP+ EG+L YTF+
Sbjct: 62  WCEIRRNAGDASSATIRNLSSDAIIVDGRIVE-QECVDIKPGSEIVSGPQKEGHLIYTFE 120

Query: 352 VIFTEEPDSRNLKILLDVELAKCSICLNIWHDVVTVSPCFHNFCNGCFSEWLRRASCRPH 531
           +   E+ + +N+KI+LD+E AKCSICLN+WHDVVTV+PC HNFCNGCFSEWLRR+S    
Sbjct: 121 ITEAEDHEKKNVKIVLDIENAKCSICLNLWHDVVTVAPCLHNFCNGCFSEWLRRSSSNSR 180

Query: 532 IIPKDIACPQCRAVVHSVGRNHFLHNIEEAILQTFSSLKRPAEEVQLLDSHASIKSNLVL 711
              +  ACPQCR  V SVGRNHFLHNIEEAILQ FSSL+R  EE+ LL+S+AS+KSN+  
Sbjct: 181 DKSQSAACPQCRTTVQSVGRNHFLHNIEEAILQAFSSLQRSDEEIALLESYASVKSNM-- 238

Query: 712 GSEKKTSRKRPLSLSNDGINGIDVPCPQCGTE 807
              K  SRKR  S S+D  +  D+PCPQC  E
Sbjct: 239 ---KNQSRKRRFSRSSDDTDNSDLPCPQCRNE 267


>gb|AFW65387.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 470

 Score =  275 bits (703), Expect = 9e-72
 Identities = 145/272 (53%), Positives = 183/272 (67%), Gaps = 11/272 (4%)
 Frame = +1

Query: 25  EAGQCSGAKEEHDP---------WAKLVPLIPGYQEVQISSEDPVVCSQTALS-SAEKLP 174
           +AG+CS +K              WA+LVP       V+++ +D VVCS  A     E++ 
Sbjct: 2   DAGECSTSKPPQPSAASPSSPTVWARLVPADSACPTVEVAEDDSVVCSLVAPPCGGEEVA 61

Query: 175 WCEINWDS-DRGLATIRNTSLAAILVDGAILEVSEELDIESGIEIVSGPKLEGYLSYTFQ 351
           WCEI  ++ D   ATIRN S  AI+VDG I+E  E +DI+ G EIVSGP+ EG+L YTF+
Sbjct: 62  WCEIRRNAGDASSATIRNLSSDAIIVDGRIVE-QECVDIKPGSEIVSGPQKEGHLIYTFE 120

Query: 352 VIFTEEPDSRNLKILLDVELAKCSICLNIWHDVVTVSPCFHNFCNGCFSEWLRRASCRPH 531
           +   E+ + +N+KI+LD+E AKCSICLN+WHDVVTV+PC HNFCNGCFSEWLRR+S    
Sbjct: 121 ITEAEDHEKKNVKIVLDIENAKCSICLNLWHDVVTVAPCLHNFCNGCFSEWLRRSSSNSR 180

Query: 532 IIPKDIACPQCRAVVHSVGRNHFLHNIEEAILQTFSSLKRPAEEVQLLDSHASIKSNLVL 711
              +  ACPQCR  V SVGRNHFLHNIEEAILQ FSSL+R  EE+ LL+S+AS     VL
Sbjct: 181 DKSQSAACPQCRTTVQSVGRNHFLHNIEEAILQAFSSLQRSDEEIALLESYAS-----VL 235

Query: 712 GSEKKTSRKRPLSLSNDGINGIDVPCPQCGTE 807
           G +K  SRKR  S S+D  +  D+PCPQC  E
Sbjct: 236 GQQKNQSRKRRFSRSSDDTDNSDLPCPQCRNE 267