BLASTX nr result

ID: Dioscorea21_contig00012958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012958
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV57641.1| copper binding protein 6 [Gossypium hirsutum]          117   7e-25
ref|XP_002447932.1| hypothetical protein SORBIDRAFT_06g018350 [S...   115   5e-24
gb|ACG29532.1| chemocyanin precursor [Zea mays]                       112   3e-23
ref|XP_002298184.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002275987.1| PREDICTED: basic blue protein isoform 1 [Vit...   112   4e-23

>gb|ADV57641.1| copper binding protein 6 [Gossypium hirsutum]
          Length = 127

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/92 (59%), Positives = 63/92 (68%)
 Frame = +1

Query: 106 MAMGRGSAKMSFGVAFICLLVLQQCFVISHAAIYTVGDNSGWTFNTVNWPQGKRFKAGDV 285
           MA GRGSA  +   A   LL L  C     AA YTVG ++GWTFNT  WP+GKRF+AGDV
Sbjct: 1   MAQGRGSASQATMSAIALLLCLMVCLETIDAATYTVGGSNGWTFNTATWPKGKRFRAGDV 60

Query: 286 LVFKYDKTVHNTVAVNAAGYKGCTTPRGSKVF 381
           LVF YD T+HN VAVN  GY  CTTP G+KV+
Sbjct: 61  LVFNYDATIHNVVAVNRRGYTNCTTPAGAKVY 92


>ref|XP_002447932.1| hypothetical protein SORBIDRAFT_06g018350 [Sorghum bicolor]
           gi|241939115|gb|EES12260.1| hypothetical protein
           SORBIDRAFT_06g018350 [Sorghum bicolor]
          Length = 130

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/93 (59%), Positives = 65/93 (69%)
 Frame = +1

Query: 103 EMAMGRGSAKMSFGVAFICLLVLQQCFVISHAAIYTVGDNSGWTFNTVNWPQGKRFKAGD 282
           +   GRGS       A + L VL Q  V + +A++TVGD  GW+FNT  W  GKRFKAGD
Sbjct: 4   QQQQGRGSGAAVVVAAAVLLCVLLQAHV-AESAVFTVGDRGGWSFNTNTWTNGKRFKAGD 62

Query: 283 VLVFKYDKTVHNTVAVNAAGYKGCTTPRGSKVF 381
           VLVFKYD T HN VAVNAAGYKGC+ PRG+KV+
Sbjct: 63  VLVFKYDSTAHNVVAVNAAGYKGCSAPRGAKVY 95


>gb|ACG29532.1| chemocyanin precursor [Zea mays]
          Length = 129

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/89 (57%), Positives = 64/89 (71%)
 Frame = +1

Query: 115 GRGSAKMSFGVAFICLLVLQQCFVISHAAIYTVGDNSGWTFNTVNWPQGKRFKAGDVLVF 294
           GRGS  ++   A   LL +     ++ +A++TVGD  GW+F+T  W  GKRFKAGDVLVF
Sbjct: 6   GRGSGAVALAAAAAVLLCVLLHAHVAESAVFTVGDRGGWSFSTGTWTNGKRFKAGDVLVF 65

Query: 295 KYDKTVHNTVAVNAAGYKGCTTPRGSKVF 381
           KYD T HN VAVNAAGYKGC+ PRG+KV+
Sbjct: 66  KYDSTAHNVVAVNAAGYKGCSAPRGAKVY 94


>ref|XP_002298184.1| predicted protein [Populus trichocarpa] gi|222845442|gb|EEE82989.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/92 (55%), Positives = 63/92 (68%)
 Frame = +1

Query: 106 MAMGRGSAKMSFGVAFICLLVLQQCFVISHAAIYTVGDNSGWTFNTVNWPQGKRFKAGDV 285
           M  GRGSA ++     +C+L+L   F ++HAA YTVG   GWTFN   WP+GK FKAGD+
Sbjct: 1   MVQGRGSAMVATVAVMLCMLLLH--FDMAHAATYTVGGPGGWTFNVSGWPKGKSFKAGDI 58

Query: 286 LVFKYDKTVHNTVAVNAAGYKGCTTPRGSKVF 381
           LVF Y    HN VAVN AGY  CT+PRG+KV+
Sbjct: 59  LVFNYSTAAHNVVAVNKAGYSSCTSPRGAKVY 90


>ref|XP_002275987.1| PREDICTED: basic blue protein isoform 1 [Vitis vinifera]
           gi|359486008|ref|XP_003633373.1| PREDICTED: basic blue
           protein isoform 2 [Vitis vinifera]
           gi|298204591|emb|CBI23866.3| unnamed protein product
           [Vitis vinifera]
          Length = 123

 Score =  112 bits (279), Expect = 4e-23
 Identities = 56/92 (60%), Positives = 68/92 (73%)
 Frame = +1

Query: 106 MAMGRGSAKMSFGVAFICLLVLQQCFVISHAAIYTVGDNSGWTFNTVNWPQGKRFKAGDV 285
           MA+GRGSA ++  V  +CL++   C ++  AA +TVG  SGW FN V WP+GKRFKAGDV
Sbjct: 1   MAVGRGSAVVAI-VLVLCLVL--PCDMVD-AATFTVGGASGWAFNAVGWPKGKRFKAGDV 56

Query: 286 LVFKYDKTVHNTVAVNAAGYKGCTTPRGSKVF 381
           LVF Y  + HN VAVN AGY GCTTPRGSKV+
Sbjct: 57  LVFNYSPSAHNVVAVNKAGYNGCTTPRGSKVY 88


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