BLASTX nr result

ID: Dioscorea21_contig00012954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012954
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513846.1| serine hydroxymethyltransferase, putative [R...    78   7e-13
ref|NP_001044960.1| Os01g0874900 [Oryza sativa Japonica Group] g...    75   6e-12
ref|XP_002456723.1| hypothetical protein SORBIDRAFT_03g041410 [S...    74   1e-11
ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1...    73   3e-11
gb|ACN26253.1| unknown [Zea mays] gi|414879458|tpg|DAA56589.1| T...    73   3e-11

>ref|XP_002513846.1| serine hydroxymethyltransferase, putative [Ricinus communis]
           gi|223546932|gb|EEF48429.1| serine
           hydroxymethyltransferase, putative [Ricinus communis]
          Length = 567

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = -3

Query: 321 LQREHGKLQKEFLNGLNNNRDVIELRSRVESFASQFAMPGFD 196
           +QREHGK+QKEFL GL NNRD++ELR+RVE+FASQFAMPGFD
Sbjct: 525 IQREHGKIQKEFLKGLQNNRDIVELRNRVETFASQFAMPGFD 566


>ref|NP_001044960.1| Os01g0874900 [Oryza sativa Japonica Group]
           gi|19386847|dbj|BAB86225.1| putative
           hydroxymethyltransferase [Oryza sativa Japonica Group]
           gi|20804756|dbj|BAB92441.1| putative serine
           hydroxymethyltransferase [Oryza sativa Japonica Group]
           gi|113534491|dbj|BAF06874.1| Os01g0874900 [Oryza sativa
           Japonica Group] gi|125528561|gb|EAY76675.1| hypothetical
           protein OsI_04630 [Oryza sativa Indica Group]
           gi|125572826|gb|EAZ14341.1| hypothetical protein
           OsJ_04263 [Oryza sativa Japonica Group]
           gi|215737211|dbj|BAG96140.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 600

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 33/43 (76%), Positives = 40/43 (93%)
 Frame = -3

Query: 321 LQREHGKLQKEFLNGLNNNRDVIELRSRVESFASQFAMPGFDV 193
           L +EHGK+QKEFL GL NN+D+IELR++VE+FASQFAMPGFDV
Sbjct: 558 LMKEHGKMQKEFLRGLQNNKDIIELRNQVENFASQFAMPGFDV 600


>ref|XP_002456723.1| hypothetical protein SORBIDRAFT_03g041410 [Sorghum bicolor]
           gi|241928698|gb|EES01843.1| hypothetical protein
           SORBIDRAFT_03g041410 [Sorghum bicolor]
          Length = 593

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = -3

Query: 315 REHGKLQKEFLNGLNNNRDVIELRSRVESFASQFAMPGFDV 193
           +EHGK+QKEFL GL NNRD+IELR++VE+FASQFAMPGFDV
Sbjct: 553 KEHGKVQKEFLRGLQNNRDIIELRNQVEAFASQFAMPGFDV 593


>ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
          Length = 563

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = -3

Query: 321 LQREHGKLQKEFLNGLNNNRDVIELRSRVESFASQFAMPGFDV 193
           LQREHGKLQK  L GL +NRDV+ELR+RVE+FA+QFAMPGFD+
Sbjct: 521 LQREHGKLQKTTLKGLESNRDVVELRARVEAFATQFAMPGFDI 563


>gb|ACN26253.1| unknown [Zea mays] gi|414879458|tpg|DAA56589.1| TPA: hypothetical
           protein ZEAMMB73_385949 [Zea mays]
          Length = 446

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = -3

Query: 315 REHGKLQKEFLNGLNNNRDVIELRSRVESFASQFAMPGFDV 193
           +EHGK+QKEFL GL NN DVIELR++VE+FASQFAMPGFDV
Sbjct: 406 KEHGKVQKEFLRGLQNNNDVIELRNQVEAFASQFAMPGFDV 446


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