BLASTX nr result

ID: Dioscorea21_contig00012949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012949
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308151.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|NP_001183030.1| hypothetical protein [Zea mays] gi|238008874...    62   4e-08
ref|NP_001140741.1| uncharacterized protein LOC100272816 [Zea ma...    62   4e-08
ref|XP_002443381.1| hypothetical protein SORBIDRAFT_08g018540 [S...    61   8e-08
ref|XP_002531341.1| conserved hypothetical protein [Ricinus comm...    61   8e-08

>ref|XP_002308151.1| predicted protein [Populus trichocarpa] gi|222854127|gb|EEE91674.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
 Frame = -2

Query: 214 NDKEGKVAGTGLLFTVFLICMVLGIILLFFISSR------KYKDEATVIHPSLRSILESV 53
           N  EG  +GT LLFTVFL  M LG IL+ F+S R        KD +  ++ SL S+ +SV
Sbjct: 187 NGTEGSTSGTTLLFTVFLCSMTLGTILVCFLSKRVDGGEEGPKDSSVSLYSSLTSLSKSV 246

Query: 52  FAPMLEIRMLLIIPLFA 2
             P+L++RMLLIIPL A
Sbjct: 247 ITPLLDVRMLLIIPLIA 263


>ref|NP_001183030.1| hypothetical protein [Zea mays] gi|238008874|gb|ACR35472.1| unknown
           [Zea mays] gi|414868497|tpg|DAA47054.1| TPA:
           hypothetical protein ZEAMMB73_837360 [Zea mays]
          Length = 444

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/67 (44%), Positives = 43/67 (64%)
 Frame = -2

Query: 202 GKVAGTGLLFTVFLICMVLGIILLFFISSRKYKDEATVIHPSLRSILESVFAPMLEIRML 23
           G + G  LLF VFL CM++GI+L+  +S R  K + T  H S  ++L+ + AP+ + RML
Sbjct: 199 GSITGKNLLFAVFLGCMIVGIVLMCLLSKRDEKKDNTPTHSSFGAMLKYIIAPLKDKRML 258

Query: 22  LIIPLFA 2
           L IPL A
Sbjct: 259 LTIPLIA 265


>ref|NP_001140741.1| uncharacterized protein LOC100272816 [Zea mays]
           gi|194700846|gb|ACF84507.1| unknown [Zea mays]
           gi|414868496|tpg|DAA47053.1| TPA: hypothetical protein
           ZEAMMB73_837360 [Zea mays]
          Length = 429

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/67 (44%), Positives = 43/67 (64%)
 Frame = -2

Query: 202 GKVAGTGLLFTVFLICMVLGIILLFFISSRKYKDEATVIHPSLRSILESVFAPMLEIRML 23
           G + G  LLF VFL CM++GI+L+  +S R  K + T  H S  ++L+ + AP+ + RML
Sbjct: 184 GSITGKNLLFAVFLGCMIVGIVLMCLLSKRDEKKDNTPTHSSFGAMLKYIIAPLKDKRML 243

Query: 22  LIIPLFA 2
           L IPL A
Sbjct: 244 LTIPLIA 250


>ref|XP_002443381.1| hypothetical protein SORBIDRAFT_08g018540 [Sorghum bicolor]
           gi|241944074|gb|EES17219.1| hypothetical protein
           SORBIDRAFT_08g018540 [Sorghum bicolor]
          Length = 445

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/67 (46%), Positives = 42/67 (62%)
 Frame = -2

Query: 202 GKVAGTGLLFTVFLICMVLGIILLFFISSRKYKDEATVIHPSLRSILESVFAPMLEIRML 23
           G V G  LLF VFL CM++GI+L+  +S R  K + T  H S   +L+ + AP+ + RML
Sbjct: 200 GSVTGKNLLFAVFLGCMIVGIVLMCLLSKRDEKRDNTPTHSSFGVMLKYIIAPLKDQRML 259

Query: 22  LIIPLFA 2
           L IPL A
Sbjct: 260 LTIPLIA 266


>ref|XP_002531341.1| conserved hypothetical protein [Ricinus communis]
           gi|223529063|gb|EEF31048.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 439

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
 Frame = -2

Query: 202 GKVAGTGLLFTVFLICMVLGIILLFFISSRKYK------DEATVIHPSLRSILESVFAPM 41
           G  +GT LLF VFL  + LGIIL+ F+S R  K      D +  ++ SL S  +SV AP+
Sbjct: 187 GTTSGTTLLFFVFLCIVTLGIILMCFLSKRVPKGEEGREDSSVSLYSSLISKSKSVIAPL 246

Query: 40  LEIRMLLIIPLFA 2
           L+IRMLLIIPL A
Sbjct: 247 LDIRMLLIIPLIA 259


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