BLASTX nr result

ID: Dioscorea21_contig00012936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012936
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW68962.1| hypothetical protein ZEAMMB73_667161 [Zea mays]        143   1e-32
ref|XP_002513888.1| splicing endonuclease positive effector sen1...   143   1e-32
ref|XP_004171521.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   142   4e-32
ref|XP_004150524.1| PREDICTED: uncharacterized ATP-dependent hel...   142   4e-32
ref|XP_003627257.1| Helicase sen1 [Medicago truncatula] gi|35552...   141   6e-32

>gb|AFW68962.1| hypothetical protein ZEAMMB73_667161 [Zea mays]
          Length = 1399

 Score =  143 bits (361), Expect = 1e-32
 Identities = 75/98 (76%), Positives = 81/98 (82%)
 Frame = +2

Query: 2    QFSLQISGFQRELLATAVAGRSQGSVGVDPDVLVARDHNRDVLLQNLAAAVEGRDKVLVE 181
            Q S +I+  QREL   A AGRSQGSVGVDPDVL  RD NRD+LLQ LAA+VE RDKVLVE
Sbjct: 911  QLSQEIAYLQRELNIVAAAGRSQGSVGVDPDVLAQRDRNRDILLQKLAASVESRDKVLVE 970

Query: 182  MSRLCILESRFSAGSNFNLEDARAKLEASFANEAEVVF 295
            MSRL ILESRF  GSNFN+EDARA LEASFANEAE+VF
Sbjct: 971  MSRLLILESRFGLGSNFNMEDARASLEASFANEAEIVF 1008


>ref|XP_002513888.1| splicing endonuclease positive effector sen1, putative [Ricinus
            communis] gi|223546974|gb|EEF48471.1| splicing
            endonuclease positive effector sen1, putative [Ricinus
            communis]
          Length = 1352

 Score =  143 bits (361), Expect = 1e-32
 Identities = 74/97 (76%), Positives = 82/97 (84%)
 Frame = +2

Query: 5    FSLQISGFQRELLATAVAGRSQGSVGVDPDVLVARDHNRDVLLQNLAAAVEGRDKVLVEM 184
            FS QI+  Q +L   A  GRSQGSVGVDPDVL+ARD NRD LLQNLAAAVE RDKVLVE+
Sbjct: 860  FSAQIADLQNKLSMAAADGRSQGSVGVDPDVLIARDQNRDALLQNLAAAVESRDKVLVEI 919

Query: 185  SRLCILESRFSAGSNFNLEDARAKLEASFANEAEVVF 295
            SRL ILE+RF AGSNFN+E+ARA LEASFANEAE+VF
Sbjct: 920  SRLLILEARFRAGSNFNMEEARASLEASFANEAEIVF 956


>ref|XP_004171521.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized ATP-dependent
            helicase C29A10.10c-like [Cucumis sativus]
          Length = 1363

 Score =  142 bits (357), Expect = 4e-32
 Identities = 73/98 (74%), Positives = 80/98 (81%)
 Frame = +2

Query: 2    QFSLQISGFQRELLATAVAGRSQGSVGVDPDVLVARDHNRDVLLQNLAAAVEGRDKVLVE 181
            Q   Q++  QREL   A A RSQGSVGVDPDVLVARD NRD LLQNLAA +EGRDK+LVE
Sbjct: 865  QLGQQMNSLQRELNVAAAAVRSQGSVGVDPDVLVARDQNRDALLQNLAAVIEGRDKILVE 924

Query: 182  MSRLCILESRFSAGSNFNLEDARAKLEASFANEAEVVF 295
            MSRL ILESR+   SNFN+EDARA LEASFANEAE+VF
Sbjct: 925  MSRLLILESRYRPNSNFNMEDARASLEASFANEAEIVF 962


>ref|XP_004150524.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
            [Cucumis sativus]
          Length = 1363

 Score =  142 bits (357), Expect = 4e-32
 Identities = 73/98 (74%), Positives = 80/98 (81%)
 Frame = +2

Query: 2    QFSLQISGFQRELLATAVAGRSQGSVGVDPDVLVARDHNRDVLLQNLAAAVEGRDKVLVE 181
            Q   Q++  QREL   A A RSQGSVGVDPDVLVARD NRD LLQNLAA +EGRDK+LVE
Sbjct: 865  QLGQQMNSLQRELNVAAAAVRSQGSVGVDPDVLVARDQNRDALLQNLAAVIEGRDKILVE 924

Query: 182  MSRLCILESRFSAGSNFNLEDARAKLEASFANEAEVVF 295
            MSRL ILESR+   SNFN+EDARA LEASFANEAE+VF
Sbjct: 925  MSRLLILESRYRPNSNFNMEDARASLEASFANEAEIVF 962


>ref|XP_003627257.1| Helicase sen1 [Medicago truncatula] gi|355521279|gb|AET01733.1|
            Helicase sen1 [Medicago truncatula]
          Length = 1516

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/98 (74%), Positives = 82/98 (83%)
 Frame = +2

Query: 2    QFSLQISGFQRELLATAVAGRSQGSVGVDPDVLVARDHNRDVLLQNLAAAVEGRDKVLVE 181
            Q++ Q+    REL ATA A RSQGSVGVDPD+L+ARD NRDVLLQNLA+ VEGRDKVLVE
Sbjct: 949  QYTQQLHCLHRELNATAAAVRSQGSVGVDPDLLMARDQNRDVLLQNLASVVEGRDKVLVE 1008

Query: 182  MSRLCILESRFSAGSNFNLEDARAKLEASFANEAEVVF 295
            MSRL +LE RF  GS FNLE+ARA LEASFANEAE+VF
Sbjct: 1009 MSRLAVLEGRFRPGSGFNLEEARASLEASFANEAEIVF 1046


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