BLASTX nr result

ID: Dioscorea21_contig00012927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012927
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK05012.1| predicted protein [Hordeum vulgare subsp. vulgare]     97   1e-18
dbj|BAK04766.1| predicted protein [Hordeum vulgare subsp. vulgare]     97   1e-18
ref|XP_004172151.1| PREDICTED: probable peptide/nitrate transpor...    95   5e-18
ref|XP_004143744.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    95   5e-18
ref|XP_003634606.1| PREDICTED: LOW QUALITY PROTEIN: probable pep...    95   5e-18

>dbj|BAK05012.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 527

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/74 (66%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
 Frame = -2

Query: 220 SSLLPSILSQKCDV-AMGPSSCPPSQLQVITFFVSLYLVAFAQGGHKPCTQAFGADQFDQ 44
           SS+LPS   Q+C V A G   CPPS LQ   F+VSLYLVA AQ GHKPC QAFGADQFD 
Sbjct: 106 SSMLPSPEGQQCTVSAQGRRECPPSSLQTAFFYVSLYLVAIAQSGHKPCVQAFGADQFDV 165

Query: 43  NNPLESKSRSSFFN 2
            +P ES SR SFFN
Sbjct: 166 TDPSESSSRGSFFN 179


>dbj|BAK04766.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 537

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/74 (66%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
 Frame = -2

Query: 220 SSLLPSILSQKCDV-AMGPSSCPPSQLQVITFFVSLYLVAFAQGGHKPCTQAFGADQFDQ 44
           SS+LPS   Q+C V A G   CPPS LQ   F+VSLYLVA AQ GHKPC QAFGADQFD 
Sbjct: 116 SSMLPSPEGQQCTVSAQGRRECPPSSLQTAFFYVSLYLVAIAQSGHKPCVQAFGADQFDV 175

Query: 43  NNPLESKSRSSFFN 2
            +P ES SR SFFN
Sbjct: 176 TDPSESSSRGSFFN 189


>ref|XP_004172151.1| PREDICTED: probable peptide/nitrate transporter At1g22540-like,
           partial [Cucumis sativus]
          Length = 458

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/77 (61%), Positives = 55/77 (71%)
 Frame = -2

Query: 232 LTFSSSLLPSILSQKCDVAMGPSSCPPSQLQVITFFVSLYLVAFAQGGHKPCTQAFGADQ 53
           LT  ++LLPS     C       +C P+ +QVI FF SLYLVAFAQGGHKPC QAFGADQ
Sbjct: 5   LTVYATLLPSPDISACQQTENSLTCSPNLVQVILFFFSLYLVAFAQGGHKPCVQAFGADQ 64

Query: 52  FDQNNPLESKSRSSFFN 2
           FD  +P ESK++SSFFN
Sbjct: 65  FDGQHPEESKAKSSFFN 81


>ref|XP_004143744.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101218147 [Cucumis sativus]
          Length = 1122

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/77 (61%), Positives = 55/77 (71%)
 Frame = -2

Query: 232 LTFSSSLLPSILSQKCDVAMGPSSCPPSQLQVITFFVSLYLVAFAQGGHKPCTQAFGADQ 53
           LT  ++LLPS     C       +C P+ +QVI FF SLYLVAFAQGGHKPC QAFGADQ
Sbjct: 670 LTVYATLLPSPDISACQQTENSLTCSPNLVQVILFFFSLYLVAFAQGGHKPCVQAFGADQ 729

Query: 52  FDQNNPLESKSRSSFFN 2
           FD  +P ESK++SSFFN
Sbjct: 730 FDGQHPEESKAKSSFFN 746



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/73 (58%), Positives = 50/73 (68%)
 Frame = -2

Query: 220 SSLLPSILSQKCDVAMGPSSCPPSQLQVITFFVSLYLVAFAQGGHKPCTQAFGADQFDQN 41
           S+L+PS  +  C        C P+  QVI FF SLYLV  AQGGHKPC QAFGADQFD  
Sbjct: 117 SALIPSPSTSACQQTEKSLPCSPNLFQVILFFFSLYLVGLAQGGHKPCVQAFGADQFDGQ 176

Query: 40  NPLESKSRSSFFN 2
           +P ES+S+SSFFN
Sbjct: 177 HPKESRSKSSFFN 189


>ref|XP_003634606.1| PREDICTED: LOW QUALITY PROTEIN: probable peptide/nitrate
           transporter At1g22540-like [Vitis vinifera]
          Length = 572

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/73 (63%), Positives = 53/73 (72%)
 Frame = -2

Query: 220 SSLLPSILSQKCDVAMGPSSCPPSQLQVITFFVSLYLVAFAQGGHKPCTQAFGADQFDQN 41
           S++LPS     C  +   +SC P QLQ+I FF SLYLVA  QGGHKPCTQAFGADQFD  
Sbjct: 126 SAVLPSPSPSDCKESNQITSCSPPQLQIILFFFSLYLVAVGQGGHKPCTQAFGADQFDGR 185

Query: 40  NPLESKSRSSFFN 2
           NP E K++SSFFN
Sbjct: 186 NPEECKAKSSFFN 198


Top