BLASTX nr result

ID: Dioscorea21_contig00012924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012924
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325559.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002267412.2| PREDICTED: probable leucine-rich repeat rece...    65   7e-09
ref|XP_003634534.1| PREDICTED: leucine-rich repeat receptor-like...    65   7e-09
ref|XP_002526839.1| protein with unknown function [Ricinus commu...    64   1e-08
ref|XP_002327333.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002325559.1| predicted protein [Populus trichocarpa] gi|222862434|gb|EEE99940.1|
           predicted protein [Populus trichocarpa]
          Length = 947

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/89 (41%), Positives = 58/89 (65%)
 Frame = +2

Query: 38  VTGINLSEHGLTTETTKNTSFFSLLCQIDSLQFLNLSHNNFESLPDSFMSNCTARFRLRI 217
           VT ++LS  GL+     N++F  ++C+I++LQ L+LS+N   S+ D F+++C     L++
Sbjct: 70  VTSLSLSVFGLS-----NSNFLPVVCKIETLQALDLSNNRLSSISDEFINDCGRIDGLKL 124

Query: 218 LDISFNQLFGQLPNFSQFTGLVSLNLSMN 304
           L+ S N L G LP F+ F GL SL+LS N
Sbjct: 125 LNFSKNLLSGSLPAFNVFVGLESLDLSFN 153


>ref|XP_002267412.2| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At5g63930-like [Vitis vinifera]
          Length = 622

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/85 (43%), Positives = 54/85 (63%)
 Frame = +2

Query: 50  NLSEHGLTTETTKNTSFFSLLCQIDSLQFLNLSHNNFESLPDSFMSNCTARFRLRILDIS 229
           NLS  GL+     ++SF  L+C+I SL+ L+LS N+F S+P+ F++ C     L+ L+ S
Sbjct: 73  NLSLSGLSLS---DSSFLPLVCEIVSLEALDLSDNSFSSVPEGFITACGKIDGLKQLNFS 129

Query: 230 FNQLFGQLPNFSQFTGLVSLNLSMN 304
            N+L G LP F+ F GL SL+ S N
Sbjct: 130 KNRLVGSLPAFNGFVGLESLDFSSN 154


>ref|XP_003634534.1| PREDICTED: leucine-rich repeat receptor-like tyrosine-protein
           kinase At2g41820-like [Vitis vinifera]
          Length = 946

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/85 (43%), Positives = 54/85 (63%)
 Frame = +2

Query: 50  NLSEHGLTTETTKNTSFFSLLCQIDSLQFLNLSHNNFESLPDSFMSNCTARFRLRILDIS 229
           NLS  GL+     ++SF  L+C+I SL+ L+LS N+F S+P+ F++ C     L+ L+ S
Sbjct: 67  NLSLSGLSLS---DSSFLPLVCEIVSLEALDLSDNSFSSVPEGFITACGKIDGLKQLNFS 123

Query: 230 FNQLFGQLPNFSQFTGLVSLNLSMN 304
            N+L G LP F+ F GL SL+ S N
Sbjct: 124 KNRLVGSLPAFNGFVGLESLDFSSN 148


>ref|XP_002526839.1| protein with unknown function [Ricinus communis]
           gi|223533843|gb|EEF35574.1| protein with unknown
           function [Ricinus communis]
          Length = 954

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/89 (41%), Positives = 54/89 (60%)
 Frame = +2

Query: 38  VTGINLSEHGLTTETTKNTSFFSLLCQIDSLQFLNLSHNNFESLPDSFMSNCTARFRLRI 217
           VT ++L   G+++     + F   +C+I+SLQ L+LS+N F S+P  F+S+C     L+ 
Sbjct: 78  VTSLSLYGFGVSS-----SGFLINVCKIESLQSLDLSNNRFSSIPSEFISSCGGINGLKR 132

Query: 218 LDISFNQLFGQLPNFSQFTGLVSLNLSMN 304
           L+ S N L G LP F  F GL SL+LS N
Sbjct: 133 LNFSRNGLTGVLPTFDGFVGLESLDLSFN 161


>ref|XP_002327333.1| predicted protein [Populus trichocarpa] gi|222835703|gb|EEE74138.1|
           predicted protein [Populus trichocarpa]
          Length = 948

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/89 (40%), Positives = 57/89 (64%)
 Frame = +2

Query: 38  VTGINLSEHGLTTETTKNTSFFSLLCQIDSLQFLNLSHNNFESLPDSFMSNCTARFRLRI 217
           VTG+ LS  GL+     N++  + +C+I++L+ L+LS N    +PD F+++C     L++
Sbjct: 71  VTGLFLSMFGLS-----NSNSLADVCKIETLRSLDLSKNRLSLIPDDFVNDCGRIDGLKL 125

Query: 218 LDISFNQLFGQLPNFSQFTGLVSLNLSMN 304
           L+IS N+L G LP F+ F GL  L+LS N
Sbjct: 126 LNISQNKLDGPLPTFNGFVGLEFLDLSFN 154


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