BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012917
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi...   339   4e-91
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,...   317   2e-84
dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]    311   9e-83
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2...   309   6e-82
ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containi...   306   4e-81

>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|296081374|emb|CBI16807.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  339 bits (870), Expect = 4e-91
 Identities = 158/282 (56%), Positives = 217/282 (76%)
 Frame = +1

Query: 4   ISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQGF 183
           IS YV+AG+ID+A++TF+EM  S CRVFS+DYN+FIGVL+  S FDLA  YY +M  QGF
Sbjct: 16  ISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGF 75

Query: 184 SLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAMK 363
           SLN+FTYSRFI GLCKV N   +E L EDM+++  VPDIWAYNIYLN LC E++LD A+ 
Sbjct: 76  SLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALG 135

Query: 364 LLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSLC 543
           ++ +M++KGREPD+VT+T ++NGLC +  F  A E+W  MV++G   D  A   LV  LC
Sbjct: 136 VVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLC 195

Query: 544 DNGKVYEAYDIVMGMIKCKVEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDLF 723
            +GKV  AY++ +G ++ +++ S SIYN+L++GFC+AG ++KA++I+SFM RNG +PDL 
Sbjct: 196 HDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLV 255

Query: 724 TFNILLNYYCDNSMLDEAENQMTKMKINGISPDRHSYNQLLK 849
           T+N+LLNY CD  +L+EAEN M KM+ +G+ PD +SYN+LLK
Sbjct: 256 TYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLK 297



 Score =  131 bits (329), Expect = 2e-28
 Identities = 77/247 (31%), Positives = 122/247 (49%)
 Frame = +1

Query: 1   LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQG 180
           LI+G+ +AG IDKA    + M  +GC    V YN  +         + A +   KM R G
Sbjct: 225 LINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSG 284

Query: 181 FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAM 360
              + ++Y+  + GLCK N L     +  +  + + + D+ +YN  + +LC       A 
Sbjct: 285 VEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAY 344

Query: 361 KLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSL 540
           KL   M  KG  PDVVTFT ++       + + A++L D+M   G+  D V   T+V  L
Sbjct: 345 KLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHL 404

Query: 541 CDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDL 720
           C  GK+  A+ +   M++  + P    YNAL++G CRA  V +A ++   M   G  PD 
Sbjct: 405 CKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDE 464

Query: 721 FTFNILL 741
            TF +++
Sbjct: 465 VTFKLII 471



 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 52/183 (28%), Positives = 81/183 (44%)
 Frame = +1

Query: 1   LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQG 180
           +I     A    +A + F EM   G     V +   I   +     ++A     +M   G
Sbjct: 330 IIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLG 389

Query: 181 FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAM 360
              +   Y+  +  LCK   +    ++F DM +    PD+ +YN  +N LC+  ++  AM
Sbjct: 390 LLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAM 449

Query: 361 KLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSL 540
            L   M   G  PD VTF  I+ GL   K  S A  +WD+M+++G  LD     TLV ++
Sbjct: 450 HLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAI 509

Query: 541 CDN 549
             N
Sbjct: 510 HSN 512



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 41/181 (22%), Positives = 71/181 (39%)
 Frame = +1

Query: 304 AYNIYLNSLCKEHKLDTAMKLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKM 483
           AY   ++S  K   +D A+K    M +       + +   +  L     F  AE+ +D+M
Sbjct: 11  AYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRM 70

Query: 484 VKRGIGLDCVAGGTLVFSLCDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVSGFCRAGMV 663
           + +G  L+       +  LC          ++  M +    P    YN  ++  C    +
Sbjct: 71  IPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQL 130

Query: 664 EKAENIVSFMGRNGHKPDLFTFNILLNYYCDNSMLDEAENQMTKMKINGISPDRHSYNQL 843
           + A  +V  M   G +PD+ T+ I++N  C     D A      M   G SPD  +   L
Sbjct: 131 DVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRAL 190

Query: 844 L 846
           +
Sbjct: 191 V 191


>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  317 bits (813), Expect = 2e-84
 Identities = 150/283 (53%), Positives = 210/283 (74%), Gaps = 1/283 (0%)
 Frame = +1

Query: 4   ISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQGF 183
           I+GYV+AG+IDKA+Q F+EM  S CRVFS+DYN+FIGVLI++S FDLA HYY +M  +GF
Sbjct: 16  IAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGF 75

Query: 184 SLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAMK 363
           SL++FTYSRFI GLCKV N +F++ L  DM  +  +PDIWA+NIYL+ L  E ++D A++
Sbjct: 76  SLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALE 135

Query: 364 LLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSLC 543
           +   +++ GR+PDVVT+T I++G+C  K F  A + W  M+ +G   D  A G +V  LC
Sbjct: 136 VFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLC 195

Query: 544 DNGKVYEAYDIVMGMIKC-KVEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDL 720
           D  KV  AY++++ ++K  +V+ ST +YNAL+SGFCRAG ++KA+ I SFM RNG +PDL
Sbjct: 196 DGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDL 255

Query: 721 FTFNILLNYYCDNSMLDEAENQMTKMKINGISPDRHSYNQLLK 849
            T+N+ LNY+CD  MLD+A+  +  M+ +GI PD +SYNQLLK
Sbjct: 256 VTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLK 298



 Score =  140 bits (354), Expect = 3e-31
 Identities = 85/283 (30%), Positives = 137/283 (48%)
 Frame = +1

Query: 1    LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQG 180
            LISG+ RAG IDKA    + M  +GC    V YN F+         D A      M R G
Sbjct: 226  LISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSG 285

Query: 181  FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAM 360
               + ++Y++ + G+CK N       L  +    + + D+ +YN  + + CK     +A 
Sbjct: 286  IEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAY 345

Query: 361  KLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSL 540
            KL   M QKG  PDVVTFT  +       +F+ A++L D+M + G+  DC+   T++  L
Sbjct: 346  KLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHL 405

Query: 541  CDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDL 720
            C +GKV  A+ I   M++  + P    +NAL++GFC+   V +A ++   M   G  PD 
Sbjct: 406  CKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDE 465

Query: 721  FTFNILLNYYCDNSMLDEAENQMTKMKINGISPDRHSYNQLLK 849
             T+ +++    +   +  A     +M   G + DR     L++
Sbjct: 466  VTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIR 508



 Score =  119 bits (299), Expect = 7e-25
 Identities = 86/322 (26%), Positives = 138/322 (42%), Gaps = 40/322 (12%)
 Frame = +1

Query: 1    LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSC----FDLAIHYYYKM 168
            +I G  +    D AIQ + +MIH G   FS D NK  G ++   C     DLA      +
Sbjct: 155  IIHGVCKIKKFDTAIQFWRDMIHKG---FSPD-NKACGAIVVGLCDGRKVDLAYELIIDV 210

Query: 169  ARQG-FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHK 345
             + G   L+   Y+  I G C+   +   + +   M +    PD+  YN++LN  C E  
Sbjct: 211  MKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELM 270

Query: 346  LDTAMKLLCSMIQKGREP-----------------------------------DVVTFTT 420
            LD A KLL  M + G EP                                   DVV++ T
Sbjct: 271  LDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNT 330

Query: 421  IMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSLCDNGKVYEAYDIVMGMIKCK 600
            I+   C   + + A +L+++M ++GI  D V     + +    G    A  ++  M +  
Sbjct: 331  IIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMG 390

Query: 601  VEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDLFTFNILLNYYCDNSMLDEAE 780
            + P    Y  ++   C++G VE A +I   M   G  PD+ +FN L+N +C  S + EA 
Sbjct: 391  LSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAM 450

Query: 781  NQMTKMKINGISPDRHSYNQLL 846
            +   +M+  G  PD  +Y  ++
Sbjct: 451  HLYEEMQNRGSYPDEVTYKLII 472


>dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  311 bits (798), Expect = 9e-83
 Identities = 149/283 (52%), Positives = 201/283 (71%)
 Frame = +1

Query: 1    LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQG 180
            L+SGYVRAG  D  I TF+EM+ SGCR F +DYN++IGVLI N CFDL   YY     +G
Sbjct: 161  LLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKG 220

Query: 181  FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAM 360
              L  FTYSR+I  LC+ N +  VE L  DM++    PDIWA NIY++ LCK+++L  A+
Sbjct: 221  LCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDAL 280

Query: 361  KLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSL 540
            +++  M  KG  PDVVT+TT++  LCN+K FS+A  LW++MVK G+  D VA G L+F L
Sbjct: 281  QMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGL 340

Query: 541  CDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDL 720
            C N KV EA+++   M+   +E S SIYNAL+SGF RAG ++KA  I+SFM  NG +P +
Sbjct: 341  CKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGV 400

Query: 721  FTFNILLNYYCDNSMLDEAENQMTKMKINGISPDRHSYNQLLK 849
             T+NILLN+YC   M+++AEN +TKM+ +G++PDR+SYNQLLK
Sbjct: 401  VTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLK 443



 Score =  123 bits (309), Expect = 5e-26
 Identities = 83/282 (29%), Positives = 135/282 (47%)
 Frame = +1

Query: 1    LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQG 180
            LISG+ RAG IDKA    + M  +GC    V YN  +         + A +   KM   G
Sbjct: 371  LISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSG 430

Query: 181  FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAM 360
             + + ++Y++ + GLCK + L        D  ++    DI + NI +++ CK  K+ +A+
Sbjct: 431  VNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSAL 490

Query: 361  KLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSL 540
            +L   M  KG + D VT+ T++NGL +   ++ AEEL+++M+K  I  +      ++  L
Sbjct: 491  ELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHL 550

Query: 541  CDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDL 720
            C  G +  A  I + MI+ ++ P    YN L+    +     +A ++   M   G +PD 
Sbjct: 551  CKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDS 610

Query: 721  FTFNILLNYYCDNSMLDEAENQMTKMKINGISPDRHSYNQLL 846
             TF  L+N   D      A      M  NGI  DR    +L+
Sbjct: 611  LTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLI 652



 Score =  101 bits (252), Expect = 2e-19
 Identities = 72/305 (23%), Positives = 127/305 (41%), Gaps = 35/305 (11%)
 Frame = +1

Query: 37   KAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQGFSLNAFTYSRFI 216
            +A+  + EM+  G +   V     I  L  NS  + A     +M      L+   Y+  I
Sbjct: 313  EAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALI 372

Query: 217  CGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLN------------------------ 324
             G  +  ++    T+   M      P +  YNI LN                        
Sbjct: 373  SGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVN 432

Query: 325  -----------SLCKEHKLDTAMKLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEEL 471
                        LCK H+LD A   +   ++ G   D+V+   +++  C  K    A EL
Sbjct: 433  PDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALEL 492

Query: 472  WDKMVKRGIGLDCVAGGTLVFSLCDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVSGFCR 651
            + +M  +G+  D V  GTL+  L   G    A ++   M+K +++P+ ++YN ++   C+
Sbjct: 493  FKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCK 552

Query: 652  AGMVEKAENIVSFMGRNGHKPDLFTFNILLNYYCDNSMLDEAENQMTKMKINGISPDRHS 831
             G +++A+ I   M +    PD+ T+N L+ +   NS   EA +    M+  G+ PD  +
Sbjct: 553  VGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLT 612

Query: 832  YNQLL 846
            +  L+
Sbjct: 613  FKYLI 617



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 60/213 (28%), Positives = 97/213 (45%)
 Frame = +1

Query: 1    LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQG 180
            L+ G  +   +DKA    ++ +  G     V  N  I           A+  + +M  +G
Sbjct: 441  LLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKG 500

Query: 181  FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAM 360
               +A TY   I GL  V   +  E LFE M K +  P++  YNI L+ LCK   L  A 
Sbjct: 501  MQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQ 560

Query: 361  KLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSL 540
            K+   MIQK   PD+VT+ T++  L  +    +A +L+  M  +G+  D +    L+  L
Sbjct: 561  KIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGL 620

Query: 541  CDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVS 639
             D G+   AY++   M++  +     +   L+S
Sbjct: 621  LDEGRSTLAYEVWEYMMENGIILDREVSERLIS 653



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 65/269 (24%), Positives = 108/269 (40%)
 Frame = +1

Query: 40   AIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQGFSLNAFTYSRFIC 219
            A+Q   +M   G     V Y   +G L +N  F  A+  + +M + G   +       I 
Sbjct: 279  ALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIF 338

Query: 220  GLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAMKLLCSMIQKGREP 399
            GLCK + +     L   M  +     +  YN  ++   +   +D A  ++  M   G EP
Sbjct: 339  GLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEP 398

Query: 400  DVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSLCDNGKVYEAYDIV 579
             VVT+  ++N  C       AE L  KM   G+  D  +   L+  LC   ++ +A+  V
Sbjct: 399  GVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFV 458

Query: 580  MGMIKCKVEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDLFTFNILLNYYCDN 759
               ++          N L+  FC+   V+ A  +   M   G + D  T+  L+N     
Sbjct: 459  SDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSV 518

Query: 760  SMLDEAENQMTKMKINGISPDRHSYNQLL 846
               + AE    +M    I P+ + YN +L
Sbjct: 519  GYYNLAEELFEQMLKAQIDPNVNLYNIML 547


>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  309 bits (791), Expect = 6e-82
 Identities = 151/283 (53%), Positives = 205/283 (72%), Gaps = 1/283 (0%)
 Frame = +1

Query: 4   ISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQGF 183
           I+ YV+AG+ID A++ F+EM  S CRVF +DYN+FIGVLI +S FDLA HYY KMA  GF
Sbjct: 16  IASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGF 75

Query: 184 SLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAMK 363
           SL++FTYSRFI GLC+    +F++ L +DM K+  VPDIWA+NIYLN L +E++ ++A++
Sbjct: 76  SLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALE 135

Query: 364 LLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSLC 543
           +   M+++GREPDVVTFT I++GLC  K F  A + W  M+ +GI  D  A   L   LC
Sbjct: 136 VFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLC 195

Query: 544 DNGKVYEAYDIVMGMIKCKV-EPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDL 720
           D G+V  AY++++G+I   + E ST +YNAL+SGFCRAG ++KA  +VSFM R G KPDL
Sbjct: 196 DGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDL 255

Query: 721 FTFNILLNYYCDNSMLDEAENQMTKMKINGISPDRHSYNQLLK 849
            T+N+LLNY C+  M +EA   + KM+ + I PD +SYNQLLK
Sbjct: 256 VTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLK 298



 Score =  122 bits (307), Expect = 8e-26
 Identities = 77/275 (28%), Positives = 129/275 (46%)
 Frame = +1

Query: 1    LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQG 180
            LISG+ RAG IDKA+   + M  +GC+   V YN  +    +   F+ A+    KM    
Sbjct: 226  LISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSA 285

Query: 181  FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAM 360
               + ++Y++ +   CK N+              +   D+ +YN  + + C       A 
Sbjct: 286  IEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAY 345

Query: 361  KLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSL 540
            KL   M +KG  PDVVTFT ++       N   A++L D M   G+  D +   T++   
Sbjct: 346  KLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHH 405

Query: 541  CDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDL 720
            C +GKV  A+ I   M++  + P    YNAL++GFC++  V +  ++   M + G  PD 
Sbjct: 406  CKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDE 465

Query: 721  FTFNILLNYYCDNSMLDEAENQMTKMKINGISPDR 825
             T+ +++      + L +A     +M   G++ DR
Sbjct: 466  VTYKLIIGALVRENKLSDACRVWDQMMERGLTLDR 500


>ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
            mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  306 bits (784), Expect = 4e-81
 Identities = 144/283 (50%), Positives = 201/283 (71%)
 Frame = +1

Query: 1    LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQG 180
            L+SGYVRAG  D  I+TF+EM+ SGCR F VDYN++IGVL+ N CFDL   YY     +G
Sbjct: 164  LLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKG 223

Query: 181  FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAM 360
            F L  FTYSR+I  LC+ N +  V+ L  DM+K+   PDIWA NIY+  LCK+++L  A+
Sbjct: 224  FCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDAL 283

Query: 361  KLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSL 540
            +++  M  KG  PDVVT+ T+++GLC++K F++A  LW++MVKR +  D  + G L+F L
Sbjct: 284  QMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGL 343

Query: 541  CDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDL 720
            C N KV EA+++   M+   +E S  IYNAL+SGF RAG ++KA  I+SFM  NG +PD+
Sbjct: 344  CKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDI 403

Query: 721  FTFNILLNYYCDNSMLDEAENQMTKMKINGISPDRHSYNQLLK 849
             T+NILLN+YC   M+++AE  + KM+ +G++PDR+SYNQLLK
Sbjct: 404  VTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLK 446



 Score =  120 bits (301), Expect = 4e-25
 Identities = 82/282 (29%), Positives = 132/282 (46%)
 Frame = +1

Query: 1    LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQG 180
            LISG+ RAG IDKA +  + M  +GC    V YN  +         + A     KM   G
Sbjct: 374  LISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSG 433

Query: 181  FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAM 360
             + + ++Y++ + GLCK + L        D  ++    D  + NI +++ CK  K+ +A+
Sbjct: 434  VNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSAL 493

Query: 361  KLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSL 540
            +L   M  KG + D VT+ T++NGL +   ++ AEEL+++M+   I  +      ++  L
Sbjct: 494  ELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHL 553

Query: 541  CDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDL 720
            C  G    A  I   MI+ +V P T  +N L+    +     +A N+   M   G +PD 
Sbjct: 554  CKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDT 613

Query: 721  FTFNILLNYYCDNSMLDEAENQMTKMKINGISPDRHSYNQLL 846
             TF  L++   D      A      M  NGI  DR    +L+
Sbjct: 614  LTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLI 655



 Score =  118 bits (296), Expect = 1e-24
 Identities = 74/282 (26%), Positives = 125/282 (44%)
 Frame = +1

Query: 1    LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQG 180
            LI G  +   +D+A +  + M+     +    YN  I         D A      M   G
Sbjct: 339  LIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNG 398

Query: 181  FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAM 360
               +  TY+  +   C +  +   E L   M      PD ++YN  L  LCK H+LD A 
Sbjct: 399  CEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAF 458

Query: 361  KLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSL 540
              +   ++ G   D V+   +++  C +K    A EL+ +M  +G+  D V  GTL+  L
Sbjct: 459  AFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGL 518

Query: 541  CDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDL 720
               G    A ++   M+  +++P+ ++YN ++   C+ G  ++A+ I S M +    PD 
Sbjct: 519  FSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDT 578

Query: 721  FTFNILLNYYCDNSMLDEAENQMTKMKINGISPDRHSYNQLL 846
             TFN L+ +    S   EA N    M+  G+ PD  ++  L+
Sbjct: 579  VTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLI 620



 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 69/269 (25%), Positives = 113/269 (42%)
 Frame = +1

Query: 40   AIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQGFSLNAFTYSRFIC 219
            A+Q   +M   G     V Y   +  L  N  F  AI  + +M ++    + F+    I 
Sbjct: 282  ALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIF 341

Query: 220  GLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAMKLLCSMIQKGREP 399
            GLCK N +     L   M  +     +  YN  ++   +   +D A K++  M   G EP
Sbjct: 342  GLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEP 401

Query: 400  DVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSLCDNGKVYEAYDIV 579
            D+VT+  ++N  C       AE+L  KM   G+  D  +   L+  LC   ++ +A+  V
Sbjct: 402  DIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFV 461

Query: 580  MGMIKCKVEPSTSIYNALVSGFCRAGMVEKAENIVSFMGRNGHKPDLFTFNILLNYYCDN 759
               ++      T   N L+  FC+   V+ A  +   MG  G + D  T+  L+N     
Sbjct: 462  SDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSV 521

Query: 760  SMLDEAENQMTKMKINGISPDRHSYNQLL 846
               + AE    +M    I P+ + YN +L
Sbjct: 522  GYYNLAEELFEQMLNAQIDPNVNLYNIML 550



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 60/213 (28%), Positives = 92/213 (43%)
 Frame = +1

Query: 1    LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQG 180
            L+ G  +   +DKA    ++ +  G    +V  N  I           A+  + +M  +G
Sbjct: 444  LLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKG 503

Query: 181  FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAM 360
               +A TY   I GL  V   +  E LFE M   +  P++  YNI L+ LCK      A 
Sbjct: 504  MQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQ 563

Query: 361  KLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSL 540
             +   MIQK   PD VTF T++  L       +A  L+  M  RG+  D +    L+  L
Sbjct: 564  TIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGL 623

Query: 541  CDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVS 639
             D GK   AY++   M++  +     +   L+S
Sbjct: 624  LDEGKSTLAYEVWEYMMENGIILDREVSERLIS 656



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 50/185 (27%), Positives = 84/185 (45%)
 Frame = +1

Query: 1    LISGYVRAGMIDKAIQTFNEMIHSGCRVFSVDYNKFIGVLIHNSCFDLAIHYYYKMARQG 180
            LI  + +   +  A++ F EM + G +  +V Y   I  L     ++LA   + +M    
Sbjct: 479  LIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQ 538

Query: 181  FSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLCKEHKLDTAM 360
               N   Y+  +  LCKV +    +T+F  M +    PD   +N  +  L K  +   A+
Sbjct: 539  IDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEAL 598

Query: 361  KLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCVAGGTLVFSL 540
             L   M  +G EPD +TF  +++GL +    + A E+W+ M++ GI LD      L+  L
Sbjct: 599  NLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLISVL 658

Query: 541  CDNGK 555
                K
Sbjct: 659  KSKNK 663



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 45/231 (19%), Positives = 88/231 (38%)
 Frame = +1

Query: 154 YYYKMARQGFSLNAFTYSRFICGLCKVNNLSFVETLFEDMNKIRSVPDIWAYNIYLNSLC 333
           Y++  +R GF  + F  +  +  L    N + +      +           Y I L+   
Sbjct: 110 YWWAESRPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYV 169

Query: 334 KEHKLDTAMKLLCSMIQKGREPDVVTFTTIMNGLCNSKNFSDAEELWDKMVKRGIGLDCV 513
           +  K D+ ++    M+  G     V +   +  L  +  F   E+ +D  + +G  L   
Sbjct: 170 RAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPF 229

Query: 514 AGGTLVFSLCDNGKVYEAYDIVMGMIKCKVEPSTSIYNALVSGFCRAGMVEKAENIVSFM 693
                + +LC + ++    ++++ M K    P     N  +   C+   +  A  +V  M
Sbjct: 230 TYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKM 289

Query: 694 GRNGHKPDLFTFNILLNYYCDNSMLDEAENQMTKMKINGISPDRHSYNQLL 846
              G  PD+ T+  +++  CDN    EA     +M    + PD  S   L+
Sbjct: 290 RTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALI 340