BLASTX nr result

ID: Dioscorea21_contig00012914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012914
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ97471.1| predicted protein [Hordeum vulgare subsp. vulgare]    134   2e-29
emb|CAH66514.1| OSIGBa0142C11.2 [Oryza sativa Indica Group]           128   1e-27
ref|XP_002447768.1| hypothetical protein SORBIDRAFT_06g015290 [S...   127   2e-27
emb|CAE04884.3| OSJNBa0042I15.6 [Oryza sativa Japonica Group]         127   2e-27
ref|XP_002269322.1| PREDICTED: uncharacterized protein At4g22758...   123   5e-26

>dbj|BAJ97471.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 214

 Score =  134 bits (337), Expect = 2e-29
 Identities = 83/177 (46%), Positives = 110/177 (62%), Gaps = 11/177 (6%)
 Frame = +1

Query: 34  RRERSNDSKKERPKRSVSFNWPGTKMMISSPEPPRQMRRPKTQPDLFS------WRTADH 195
           R+E      +   +RS SF+  GT+      +     +RPKTQPDL +      +R AD 
Sbjct: 18  RQEAGGQLLRGPGQRSASFHGRGTEQRHQLAK-----QRPKTQPDLLAGVRGRNFRAADD 72

Query: 196 APPPALQHHLRPLEERLPSKLLVNVTITRSLGAVQVMASTLWTVNELIAATVELYIKEGR 375
             P A++        R PSK+LVNVT+ RSL  + VMAS  W+V +L+AA V +Y+KEGR
Sbjct: 73  GEPLAVR--------RTPSKVLVNVTVQRSLWPLNVMASAEWSVADLVAAAVGIYVKEGR 124

Query: 376 RPLLPTTLLSHFTLHYSQFSLEGLDPNEKLKELGSRTFFLYIKSTAA-----TASCS 531
           RPLLP+T  S F LHYSQFSLE LDP EK+ ELGSR+FFL  +S++A     ++SCS
Sbjct: 125 RPLLPSTDPSTFGLHYSQFSLESLDPREKVMELGSRSFFLCPRSSSAAIQTSSSSCS 181


>emb|CAH66514.1| OSIGBa0142C11.2 [Oryza sativa Indica Group]
          Length = 239

 Score =  128 bits (322), Expect = 1e-27
 Identities = 87/180 (48%), Positives = 108/180 (60%), Gaps = 15/180 (8%)
 Frame = +1

Query: 73  KRSVSFNWPGTKMMISSPEPPRQM--RRPKTQPDLFSW----RTADHAPPPALQHHLRPL 234
           +RS SF+  GT       EP  Q+  +RPKTQPDL +      TA    P A       L
Sbjct: 45  QRSASFHGRGT-------EPRHQLARQRPKTQPDLLAGVRGRATAASFGPAAAAGGGEQL 97

Query: 235 E-----ERLPSKLLVNVTITRSLGAVQVMASTLWTVNELIAATVELYIKEGRRPLLPTTL 399
           E      R PSK+LV+V + RSL  + VMAS  W+V +L+AA V LY+KEGRRP LP+  
Sbjct: 98  EPEAAGRRTPSKVLVSVAVQRSLWPLHVMASAAWSVADLVAAAVALYVKEGRRPPLPSAD 157

Query: 400 LSHFTLHYSQFSLEGLDPNEKLKELGSRTFFLYIKSTAA----TASCSDQVQNSSKIDER 567
            S F LHYSQFSLE LDP EK+ ELGSR+FFL  KS+AA    + SCS     +S+I +R
Sbjct: 158 PSDFGLHYSQFSLESLDPREKVMELGSRSFFLCPKSSAAVHAPSPSCSS--DEASRIRDR 215


>ref|XP_002447768.1| hypothetical protein SORBIDRAFT_06g015290 [Sorghum bicolor]
           gi|241938951|gb|EES12096.1| hypothetical protein
           SORBIDRAFT_06g015290 [Sorghum bicolor]
          Length = 220

 Score =  127 bits (320), Expect = 2e-27
 Identities = 78/172 (45%), Positives = 103/172 (59%), Gaps = 6/172 (3%)
 Frame = +1

Query: 34  RRERSNDSKKERPKRSVSFNWPGTKMMISSPEPPRQMRRPKTQPDLFS------WRTADH 195
           R +R   +     +RS SF+  GT+        P Q +RPKT PD+ +      +R+   
Sbjct: 22  RHQRQGMAGAASQQRSASFHGRGTEQQRHLQ--PHQKQRPKTLPDVLAGVRGAGFRSGSS 79

Query: 196 APPPALQHHLRPLEERLPSKLLVNVTITRSLGAVQVMASTLWTVNELIAATVELYIKEGR 375
            P PA     R    R PSK+LV+V + +S+  + VMAS  WTV +L+AA V LY+KEGR
Sbjct: 80  PPGPADGDTGRTT--RTPSKVLVSVAVQQSMWPLHVMASAEWTVADLVAAAVALYVKEGR 137

Query: 376 RPLLPTTLLSHFTLHYSQFSLEGLDPNEKLKELGSRTFFLYIKSTAATASCS 531
           RPLLP+T  + F LHYSQF LE LDP EK+ ELGSR+FFL  +S+AA    S
Sbjct: 138 RPLLPSTDPAAFGLHYSQFCLESLDPKEKIMELGSRSFFLCPRSSAAGQDAS 189


>emb|CAE04884.3| OSJNBa0042I15.6 [Oryza sativa Japonica Group]
          Length = 240

 Score =  127 bits (320), Expect = 2e-27
 Identities = 87/180 (48%), Positives = 108/180 (60%), Gaps = 15/180 (8%)
 Frame = +1

Query: 73  KRSVSFNWPGTKMMISSPEPPRQM--RRPKTQPDLFSW----RTADHAPPPALQHHLRPL 234
           +RS SF+  GT       EP  Q+  +RPKTQPDL +      TA    P A       L
Sbjct: 46  QRSASFHGRGT-------EPWHQLARQRPKTQPDLLAGVRGRATAASFGPAAAAGGGEQL 98

Query: 235 E-----ERLPSKLLVNVTITRSLGAVQVMASTLWTVNELIAATVELYIKEGRRPLLPTTL 399
           E      R PSK+LV+V + RSL  + VMAS  W+V +L+AA V LY+KEGRRP LP+  
Sbjct: 99  EPEAAGRRTPSKVLVSVAVQRSLWPLHVMASAAWSVADLVAAAVALYVKEGRRPPLPSAD 158

Query: 400 LSHFTLHYSQFSLEGLDPNEKLKELGSRTFFLYIKSTAA----TASCSDQVQNSSKIDER 567
            S F LHYSQFSLE LDP EK+ ELGSR+FFL  KS+AA    + SCS     +S+I +R
Sbjct: 159 PSDFGLHYSQFSLESLDPREKVMELGSRSFFLCPKSSAAVHAPSPSCSS--DEASRIRDR 216


>ref|XP_002269322.1| PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera]
          Length = 196

 Score =  123 bits (308), Expect = 5e-26
 Identities = 86/197 (43%), Positives = 108/197 (54%), Gaps = 15/197 (7%)
 Frame = +1

Query: 34  RRERSNDSKKER-PKRSVSFNWPGTKMMISSPEPPRQMRRPKTQPDLFSWRTADHAPPPA 210
           RR     ++K R  +RS SF+  G  M ++   P  ++RRPKT PDL S R+     P  
Sbjct: 8   RRGHEEKNRKGRLAQRSSSFH-SGIPMTMA---PQAELRRPKTLPDLLSGRSVSGLSPEG 63

Query: 211 LQHHLRPLEERLPSKLLVNVTITRSLGAVQVMASTLWTVNELIAATVELYIKEGRRPLLP 390
                     RL +KLL+NVT+ RSLG VQV+ S   TV +LIAA +  Y KEGRR +LP
Sbjct: 64  --------GPRL-TKLLLNVTVQRSLGPVQVVMSPDSTVGDLIAAVLRQYAKEGRRLVLP 114

Query: 391 TTLLSHFTLHYSQFSLEGLDPNEKLKELGSRTFFLYIK--------------STAATASC 528
           TT  + F LHYSQFSLE LD NEKL  LGSR FFL  K               T ++++C
Sbjct: 115 TTDPAGFDLHYSQFSLESLDRNEKLMTLGSRNFFLCCKKSEPDVGESAAEASETTSSSTC 174

Query: 529 SDQVQNSSKIDERWFNF 579
           S +    SKI   W  F
Sbjct: 175 STEADKVSKISVPWLKF 191


Top