BLASTX nr result

ID: Dioscorea21_contig00012890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012890
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527750.1| arf gtpase-activating protein, putative [Ric...   173   1e-41
tpg|DAA44701.1| TPA: putative ARF GTPase-activating domain famil...   163   1e-38
gb|EAY89468.1| hypothetical protein OsI_11000 [Oryza sativa Indi...   160   8e-38
ref|XP_002309050.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|NP_001049726.1| Os03g0278400 [Oryza sativa Japonica Group] g...   159   3e-37

>ref|XP_002527750.1| arf gtpase-activating protein, putative [Ricinus communis]
           gi|223532891|gb|EEF34663.1| arf gtpase-activating
           protein, putative [Ricinus communis]
          Length = 457

 Score =  173 bits (438), Expect = 1e-41
 Identities = 90/129 (69%), Positives = 101/129 (78%), Gaps = 5/129 (3%)
 Frame = +3

Query: 12  KPPIGNHGSSKNGGWDSWDGDDFQPS---DMKRNQTVGDFRAGNGGRGTGEHPTRSRSTQ 182
           KPP+G  G + NGGWDSWD DD   S   DM+RNQ+V DFR GN G G G  P RSRST+
Sbjct: 138 KPPLGQSGGN-NGGWDSWDNDDSYRSSSNDMRRNQSVSDFR-GNNGNGAGGMPVRSRSTE 195

Query: 183 DLYTRSQLEASAANKESFFERKMSENNSRPEGLPPSQGGKYVGFGSTPPPSAQ--RNTSQ 356
           D+YTRSQLEASAANKESFF RKM+EN+SRPEGLPPSQGGKYVGFGS P PS +   N SQ
Sbjct: 196 DMYTRSQLEASAANKESFFARKMAENDSRPEGLPPSQGGKYVGFGSGPAPSNRNINNNSQ 255

Query: 357 GDMFSVVSQ 383
            D+FSV+SQ
Sbjct: 256 PDVFSVMSQ 264


>tpg|DAA44701.1| TPA: putative ARF GTPase-activating domain family protein [Zea
           mays]
          Length = 454

 Score =  163 bits (413), Expect = 1e-38
 Identities = 81/126 (64%), Positives = 97/126 (76%), Gaps = 2/126 (1%)
 Frame = +3

Query: 12  KPPIGNHGSSKNGGWDSWDGDDFQPSDMKRNQTVGDFRAGNGGRGTGEHPTRSRSTQDLY 191
           KPP+    +S  GGWD WD DDF+P DM+RNQ+VG F A   G  +G  P RS+STQD+Y
Sbjct: 142 KPPVHTSAASGGGGWDDWD-DDFRP-DMRRNQSVGSFAAA--GAQSGRQPPRSKSTQDMY 197

Query: 192 TRSQLEASAANKESFFERKMSENNSRPEGLPPSQGGKYVGFGSTPPPSAQRN--TSQGDM 365
           TR QLEASAANKE FF R+M+EN S+P+G+PPSQGGKYVGFGS+PPPSA RN   +QGD+
Sbjct: 198 TRQQLEASAANKEDFFARRMAENESKPDGIPPSQGGKYVGFGSSPPPSANRNGGAAQGDV 257

Query: 366 FSVVSQ 383
             VVSQ
Sbjct: 258 MQVVSQ 263


>gb|EAY89468.1| hypothetical protein OsI_11000 [Oryza sativa Indica Group]
          Length = 454

 Score =  160 bits (406), Expect = 8e-38
 Identities = 82/128 (64%), Positives = 97/128 (75%), Gaps = 4/128 (3%)
 Frame = +3

Query: 12  KPPI--GNHGSSKNGGWDSWDGDDFQPSDMKRNQTVGDFRAGNGGRGTGEHPTRSRSTQD 185
           KPP+  G  G    GGWD WD DDF+P DM+RNQ+VG F  G  G  +G  P RS+STQD
Sbjct: 142 KPPLPAGGGGGGGGGGWDDWD-DDFRP-DMRRNQSVGSF--GESGAESGRQPPRSKSTQD 197

Query: 186 LYTRSQLEASAANKESFFERKMSENNSRPEGLPPSQGGKYVGFGSTPPPSAQRN--TSQG 359
           +YTR QLEASAANK+SFF R+M+EN S+PEG+PPSQGGKYVGFGS+P PSA RN   +QG
Sbjct: 198 MYTRQQLEASAANKDSFFARRMAENESKPEGIPPSQGGKYVGFGSSPAPSANRNGAAAQG 257

Query: 360 DMFSVVSQ 383
           D+  VVSQ
Sbjct: 258 DVMQVVSQ 265


>ref|XP_002309050.1| predicted protein [Populus trichocarpa] gi|222855026|gb|EEE92573.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  159 bits (402), Expect = 2e-37
 Identities = 83/142 (58%), Positives = 99/142 (69%), Gaps = 18/142 (12%)
 Frame = +3

Query: 12  KPPIGNHGS---------SKNGGWDSWDGDDF---QPSDMKRNQTVGDFRAGN--GGRGT 149
           KPP+   GS         S NGGWD+WD DD      SD++RNQ+V DFR GN  GG G 
Sbjct: 135 KPPLSQSGSAGGGRDDYSSNNGGWDNWDNDDSLGSSSSDVRRNQSVSDFRGGNTGGGGGG 194

Query: 150 GEH----PTRSRSTQDLYTRSQLEASAANKESFFERKMSENNSRPEGLPPSQGGKYVGFG 317
           G H    P RSRST+D+YTRSQLEASAANKESFF R+M++N SR + +PPSQGGKYVGFG
Sbjct: 195 GGHAMGGPVRSRSTEDIYTRSQLEASAANKESFFARRMADNESRSDAVPPSQGGKYVGFG 254

Query: 318 STPPPSAQRNTSQGDMFSVVSQ 383
           S+P P+ + N SQ D+ S VSQ
Sbjct: 255 SSPAPTQRNNNSQQDVLSAVSQ 276


>ref|NP_001049726.1| Os03g0278400 [Oryza sativa Japonica Group]
           gi|108707489|gb|ABF95284.1| ARF GAP-like zinc
           finger-containing protein ZIGA2, putative, expressed
           [Oryza sativa Japonica Group]
           gi|113548197|dbj|BAF11640.1| Os03g0278400 [Oryza sativa
           Japonica Group] gi|125585794|gb|EAZ26458.1| hypothetical
           protein OsJ_10347 [Oryza sativa Japonica Group]
           gi|215697749|dbj|BAG91743.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 453

 Score =  159 bits (401), Expect = 3e-37
 Identities = 81/127 (63%), Positives = 96/127 (75%), Gaps = 3/127 (2%)
 Frame = +3

Query: 12  KPPI-GNHGSSKNGGWDSWDGDDFQPSDMKRNQTVGDFRAGNGGRGTGEHPTRSRSTQDL 188
           KPP+    G    GGWD WD DDF+P DM+RNQ+VG F  G  G  +G  P RS+STQD+
Sbjct: 142 KPPLPAGGGGGGGGGWDDWD-DDFRP-DMRRNQSVGSF--GESGAESGRQPPRSKSTQDM 197

Query: 189 YTRSQLEASAANKESFFERKMSENNSRPEGLPPSQGGKYVGFGSTPPPSAQRN--TSQGD 362
           YTR QLEASAANK+SFF R+M+EN S+PEG+PPSQGGKYVGFGS+P PSA RN   +QGD
Sbjct: 198 YTRQQLEASAANKDSFFARRMAENESKPEGIPPSQGGKYVGFGSSPAPSANRNGAAAQGD 257

Query: 363 MFSVVSQ 383
           +  VVSQ
Sbjct: 258 VMQVVSQ 264