BLASTX nr result

ID: Dioscorea21_contig00012879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012879
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167007.1| PREDICTED: probable 26S proteasome non-ATPas...    69   3e-10
ref|XP_004144854.1| PREDICTED: probable 26S proteasome non-ATPas...    69   3e-10
sp|P93768.1|PSMD3_TOBAC RecName: Full=Probable 26S proteasome no...    69   3e-10
gb|AFK34954.1| unknown [Lotus japonicus]                               68   7e-10
ref|XP_003527532.1| PREDICTED: probable 26S proteasome non-ATPas...    68   7e-10

>ref|XP_004167007.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit
           3a-like, partial [Cucumis sativus]
          Length = 287

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/52 (65%), Positives = 34/52 (65%)
 Frame = +3

Query: 3   AFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDDF 158
           AFCLNMHNEAVRALRFPPNSH                  LAKHIAEEDDDDF
Sbjct: 236 AFCLNMHNEAVRALRFPPNSHKEKESAEKRRERQQQEQELAKHIAEEDDDDF 287


>ref|XP_004144854.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit
           3-like [Cucumis sativus]
          Length = 481

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/52 (65%), Positives = 34/52 (65%)
 Frame = +3

Query: 3   AFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDDF 158
           AFCLNMHNEAVRALRFPPNSH                  LAKHIAEEDDDDF
Sbjct: 430 AFCLNMHNEAVRALRFPPNSHKEKESAETRRERQQQEQELAKHIAEEDDDDF 481


>sp|P93768.1|PSMD3_TOBAC RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit
           3; Short=26S proteasome subunit S3; AltName: Full=26S
           proteasome regulatory subunit RPN3; AltName:
           Full=Nuclear antigen 21D7 gi|1864003|dbj|BAA19252.1|
           21D7 [Nicotiana tabacum]
          Length = 488

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/52 (65%), Positives = 34/52 (65%)
 Frame = +3

Query: 3   AFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDDF 158
           AFCLNMHNEAVRALRFPPNSH                  LAKHIAEEDDDDF
Sbjct: 437 AFCLNMHNEAVRALRFPPNSHKEKESAEKRRERQQQEQELAKHIAEEDDDDF 488


>gb|AFK34954.1| unknown [Lotus japonicus]
          Length = 187

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/52 (63%), Positives = 34/52 (65%)
 Frame = +3

Query: 3   AFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDDF 158
           AFCLNMHNEAVRALRFPPN+H                  LAKHIAEEDDDDF
Sbjct: 136 AFCLNMHNEAVRALRFPPNTHKEKESAEKRRERQQQEQELAKHIAEEDDDDF 187


>ref|XP_003527532.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit
           3-like [Glycine max]
          Length = 487

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/52 (63%), Positives = 34/52 (65%)
 Frame = +3

Query: 3   AFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDDF 158
           AFCLNMHNEAVRALRFPPN+H                  LAKHIAEEDDDDF
Sbjct: 436 AFCLNMHNEAVRALRFPPNTHKEKESAEKRRERQQQEQELAKHIAEEDDDDF 487


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