BLASTX nr result

ID: Dioscorea21_contig00012858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012858
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW58800.1| DNA mismatch repair protein [Zea mays]                  98   8e-19
ref|NP_001105898.1| DNA mismatch repair protein [Zea mays] gi|61...    98   8e-19
ref|XP_002448138.1| hypothetical protein SORBIDRAFT_06g021950 [S...    97   1e-18
emb|CAH67334.1| OSIGBa0157A06.3 [Oryza sativa Indica Group]            87   1e-15
gb|EEE61302.1| hypothetical protein OsJ_15393 [Oryza sativa Japo...    87   2e-15

>gb|AFW58800.1| DNA mismatch repair protein [Zea mays]
          Length = 1131

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/104 (45%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
 Frame = +3

Query: 81  MHRLMVNSIMLHSPRWL--STSFLRRRPAISRRSCTPALPLMVERKYYFKAHKCMKGIPK 254
           MHR++V+S++  +PRWL  + S LRRR    R  C+P   LM +R+ + K  K  +GI  
Sbjct: 1   MHRVLVSSLVAATPRWLPLADSILRRR----RPRCSPLPVLMFDRRAWSKPRKVSRGISV 56

Query: 255 ASRRLKSHKDFCEETGHSHILWWKERMQMCKKPSTVQLTKRLDY 386
           ASR+     ++C+E+  SHI+WWKE+M+ C+KPS++QLT+RL Y
Sbjct: 57  ASRKANKQGEYCDESMLSHIMWWKEKMERCRKPSSIQLTQRLVY 100


>ref|NP_001105898.1| DNA mismatch repair protein [Zea mays] gi|61696671|gb|AAX53096.1|
           DNA mismatch repair protein [Zea mays]
          Length = 1131

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/104 (45%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
 Frame = +3

Query: 81  MHRLMVNSIMLHSPRWL--STSFLRRRPAISRRSCTPALPLMVERKYYFKAHKCMKGIPK 254
           MHR++V+S++  +PRWL  + S LRRR    R  C+P   LM +R+ + K  K  +GI  
Sbjct: 1   MHRVLVSSLVAATPRWLPLADSILRRR----RPRCSPLPVLMFDRRAWSKPRKVSRGISV 56

Query: 255 ASRRLKSHKDFCEETGHSHILWWKERMQMCKKPSTVQLTKRLDY 386
           ASR+     ++C+E+  SHI+WWKE+M+ C+KPS++QLT+RL Y
Sbjct: 57  ASRKANKQGEYCDESMLSHIMWWKEKMERCRKPSSIQLTQRLVY 100


>ref|XP_002448138.1| hypothetical protein SORBIDRAFT_06g021950 [Sorghum bicolor]
           gi|241939321|gb|EES12466.1| hypothetical protein
           SORBIDRAFT_06g021950 [Sorghum bicolor]
          Length = 1059

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/104 (45%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
 Frame = +3

Query: 81  MHRLMVNSIMLHSPRWL--STSFLRRRPAISRRSCTPALPLMVERKYYFKAHKCMKGIPK 254
           MHR++V+S++  +PRWL  + S LRRR    R  C+P   L+ +R+ + K  K  +GI  
Sbjct: 1   MHRVLVSSLVAATPRWLPLADSILRRR----RPRCSPLPMLLFDRRAWSKPRKVSRGISV 56

Query: 255 ASRRLKSHKDFCEETGHSHILWWKERMQMCKKPSTVQLTKRLDY 386
           ASR+     ++C+E+  SHI+WWKE+M+ C+KPS+VQLT+RL Y
Sbjct: 57  ASRKANKQGEYCDESMLSHIMWWKEKMEKCRKPSSVQLTQRLVY 100


>emb|CAH67334.1| OSIGBa0157A06.3 [Oryza sativa Indica Group]
          Length = 1133

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
 Frame = +3

Query: 81  MHRLMVNSIMLHSPRWL---STSFLRRRPAISRRSCTPALPLMVERKYYFKAHKCMKGIP 251
           + RL+ +S++  +PRWL   + SFLRRR    R  C+P   L+  R+ + K  K  + I 
Sbjct: 3   IQRLLASSLVAATPRWLPVAADSFLRRR---HRPRCSPLPALLFNRRSWSKPRKVSRSIS 59

Query: 252 KASRRLKSHKDFCEETGHSHILWWKERMQMCKKPSTVQLTKRLDY 386
             SR++    D C E    HILWWKE+M+ C+KPS++QLT+RL Y
Sbjct: 60  MVSRKMNKQGDLCNEGMLPHILWWKEKMERCRKPSSMQLTQRLVY 104


>gb|EEE61302.1| hypothetical protein OsJ_15393 [Oryza sativa Japonica Group]
          Length = 1227

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
 Frame = +3

Query: 81  MHRLMVNSIMLHSPRWL---STSFLRRRPAISRRSCTPALPLMVERKYYFKAHKCMKGIP 251
           + RL+ +S++  +PRWL   + SFLRRR    R  C+P   L+  R+ + K  K  + I 
Sbjct: 3   IQRLLASSLVAATPRWLPVAADSFLRRR---HRPRCSPLPALLFNRRSWSKPRKVSRSIS 59

Query: 252 KASRRLKSHKDFCEETGHSHILWWKERMQMCKKPSTVQLTKRLDY 386
             SR++    D C E    HILWWKE+M+ C+KPS++QLT+RL Y
Sbjct: 60  IVSRKMNKQGDLCNEGMLPHILWWKEKMERCRKPSSMQLTQRLVY 104


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