BLASTX nr result

ID: Dioscorea21_contig00012848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012848
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44512.1| unknown [Medicago truncatula]                          160   8e-38
gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]             160   8e-38
ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group] g...   158   4e-37
gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indi...   158   5e-37
ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [S...   156   1e-36

>gb|AFK44512.1| unknown [Medicago truncatula]
          Length = 144

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/83 (93%), Positives = 80/83 (96%)
 Frame = -3

Query: 251 TNLFVSGLSKRTTTEGLREAFQKFGEVVSARVVTDRVSGYSKGFGFVRYATLEDAGKGIE 72
           TNLFVSGLSKRTTTE LREAFQKFGEVV ARVVTDRVSGYSKGFGFV+YATLEDA KGIE
Sbjct: 51  TNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIE 110

Query: 71  GMDGKFLDGWVIFAEYARPRPPP 3
           GMDGKFL+GWVIFAEYARPRPPP
Sbjct: 111 GMDGKFLEGWVIFAEYARPRPPP 133


>gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
          Length = 139

 Score =  160 bits (406), Expect = 8e-38
 Identities = 81/114 (71%), Positives = 88/114 (77%)
 Frame = -3

Query: 344 TTVRSGFRRLXXXXXXXXXXXXXXXXXXXXSTNLFVSGLSKRTTTEGLREAFQKFGEVVS 165
           +  R+GFRR+                    +TNLFVSGLSKRTTTEGLREAF KFGEVV 
Sbjct: 5   SVARNGFRRMFSISAFAPPPPAVPKPPADPNTNLFVSGLSKRTTTEGLREAFAKFGEVVH 64

Query: 164 ARVVTDRVSGYSKGFGFVRYATLEDAGKGIEGMDGKFLDGWVIFAEYARPRPPP 3
           ARVVTDRVSGYSKGFGFV+YATLEDA +GI+GMDGKFLDGWVIFAEYARPR PP
Sbjct: 65  ARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGMDGKFLDGWVIFAEYARPRAPP 118


>ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
           gi|38636774|dbj|BAD03017.1| putative RNA recognition
           motif (RRM)-containing protein [Oryza sativa Japonica
           Group] gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza
           sativa Japonica Group] gi|215767574|dbj|BAG99802.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222639884|gb|EEE68016.1| hypothetical protein
           OsJ_25986 [Oryza sativa Japonica Group]
          Length = 141

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/113 (69%), Positives = 87/113 (76%)
 Frame = -3

Query: 341 TVRSGFRRLXXXXXXXXXXXXXXXXXXXXSTNLFVSGLSKRTTTEGLREAFQKFGEVVSA 162
           T RSGFRR+                    S NLF+SGLSKRTTT+GL+EAF KFGEV+ A
Sbjct: 6   TARSGFRRMFSISAFSPPKPPTPPPKADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHA 65

Query: 161 RVVTDRVSGYSKGFGFVRYATLEDAGKGIEGMDGKFLDGWVIFAEYARPRPPP 3
           RVVTDRV+G+SKGFGFVRYAT+EDA KGIEGMDGKFLDGWVIFAEYARPR PP
Sbjct: 66  RVVTDRVTGFSKGFGFVRYATVEDAAKGIEGMDGKFLDGWVIFAEYARPRTPP 118


>gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
          Length = 141

 Score =  158 bits (399), Expect = 5e-37
 Identities = 78/113 (69%), Positives = 87/113 (76%)
 Frame = -3

Query: 341 TVRSGFRRLXXXXXXXXXXXXXXXXXXXXSTNLFVSGLSKRTTTEGLREAFQKFGEVVSA 162
           T RSGFRR+                    S NLF+SGLSKRTTT+GL+EAF KFGEV+ A
Sbjct: 6   TARSGFRRMFSISAFSPPKPPTPPPKADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHA 65

Query: 161 RVVTDRVSGYSKGFGFVRYATLEDAGKGIEGMDGKFLDGWVIFAEYARPRPPP 3
           RVVTDRV+G+SKGFGF+RYAT+EDA KGIEGMDGKFLDGWVIFAEYARPR PP
Sbjct: 66  RVVTDRVTGFSKGFGFIRYATVEDAAKGIEGMDGKFLDGWVIFAEYARPRTPP 118


>ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
           gi|241941370|gb|EES14515.1| hypothetical protein
           SORBIDRAFT_07g002960 [Sorghum bicolor]
          Length = 140

 Score =  156 bits (395), Expect = 1e-36
 Identities = 81/111 (72%), Positives = 85/111 (76%)
 Frame = -3

Query: 335 RSGFRRLXXXXXXXXXXXXXXXXXXXXSTNLFVSGLSKRTTTEGLREAFQKFGEVVSARV 156
           RSGFRR+                    S NLFVSGLSKRTTTEGLR+AF KFGEVV ARV
Sbjct: 7   RSGFRRMFSVSAFAPPKAPAPRPQADPSPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARV 66

Query: 155 VTDRVSGYSKGFGFVRYATLEDAGKGIEGMDGKFLDGWVIFAEYARPRPPP 3
           VTDRVSG+SKGFGFVRYAT E+A KGIEGMDGKFLDGWVIFAEYARPR PP
Sbjct: 67  VTDRVSGFSKGFGFVRYATTEEATKGIEGMDGKFLDGWVIFAEYARPRAPP 117


Top