BLASTX nr result
ID: Dioscorea21_contig00012842
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00012842
(1895 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase... 496 0.0
ref|XP_002329850.1| predicted protein [Populus trichocarpa] gi|2... 504 0.0
ref|XP_004147572.1| PREDICTED: deoxyribodipyrimidine photo-lyase... 490 0.0
ref|NP_001238710.1| CPD photolyase [Glycine max] gi|169159213|db... 484 0.0
gb|AAP31406.1| CPD photolyase [Spinacia oleracea] gi|30421159|gb... 478 0.0
>ref|XP_002266483.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Vitis vinifera]
Length = 485
Score = 496 bits (1276), Expect(2) = 0.0
Identities = 242/358 (67%), Positives = 287/358 (80%), Gaps = 4/358 (1%)
Frame = +3
Query: 72 LVHGGRIRVLKPSSSSS---TGPVVYWMFRDQRASDNWALLHAADLAARSSAPLAVVFNL 242
+V GRIRVLK S+ S GPVVYWMFRDQR DNWAL+HA D A +++ P+A+ FNL
Sbjct: 1 MVQQGRIRVLKEGSTPSGRDAGPVVYWMFRDQRLRDNWALIHAVDQANKANVPVAIAFNL 60
Query: 243 FHRFLGAHARHLGFMIRGLRLLSLRF-QSLGIPFLLLRGDAVDTIPDLLYRCGASYLVTD 419
F +FLGA AR LGFM+RGLRLL Q+L IPF L +G+A++TIP+ L GAS LVTD
Sbjct: 61 FDQFLGAKARQLGFMLRGLRLLHRDLEQTLQIPFFLFQGEAIETIPNFLREYGASLLVTD 120
Query: 420 FSPLRQVRAWKDDICGRVGPGVAVHEVDAHNVVPLWVASQKLEYGARTIRGKIHKLLPEY 599
FSPLR+V+ WK++IC RVG V++HEVDAHN+VP WVAS+KLEY ARTIRGKI+KLLPEY
Sbjct: 121 FSPLREVQKWKEEICKRVGKKVSIHEVDAHNIVPTWVASEKLEYSARTIRGKINKLLPEY 180
Query: 600 LVGFPELPVLENKWKAWDPPEIDWDELLADALRRGEDVPEIRWCEPGEEGAMEVLKGSKD 779
L+ FP L KW A IDWD+L+ + LR G +VPEI+WCE GE A+E+L GSK+
Sbjct: 181 LIDFPTLQPPSIKW-AGTNQSIDWDDLITEVLREGAEVPEIKWCESGENAAVEILMGSKN 239
Query: 780 GFFTKRLKNYESGRNDPLKPKGLSGLSPYLHFGQISAQRCALDAQALRKSHPKSVDAFLE 959
GF TKRLKNY + RN+PLKP LSGLSPYLHFGQISAQRCAL+A+ RK+ P++VD FLE
Sbjct: 240 GFLTKRLKNYSTDRNNPLKPGALSGLSPYLHFGQISAQRCALEAKKNRKNCPQAVDVFLE 299
Query: 960 ELIVRRELADNFCYYQPHYDSLQGAWEWAQKTLMDHAGDKREHIYTKEQLEKAKTADP 1133
ELIVRRELADNFC+YQP Y+SLQGAWEWA+KTLMDHA DKREHIYTKEQLE A+TADP
Sbjct: 300 ELIVRRELADNFCFYQPRYNSLQGAWEWARKTLMDHASDKREHIYTKEQLENAQTADP 357
Score = 233 bits (593), Expect(2) = 0.0
Identities = 100/117 (85%), Positives = 113/117 (96%)
Frame = +2
Query: 1217 LWNAAQLEMVHYGKMHGFMRMYWAKKILEWTTGPEEALSVAIYLNDKYEIDGRDPNGYVG 1396
LWNA+QLEMVHYGKMHGFMRMYWAKKILEWT GPEEAL+++IYLNDKYEIDGRDPNGYVG
Sbjct: 358 LWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALAISIYLNDKYEIDGRDPNGYVG 417
Query: 1397 CMWSICGIHDQGWKERPVFGKIRYMNYAGCKRKFDVDGYISYINKLVFETKKRKSEA 1567
CMWSICG+HDQGW+ER +FGKIRYMNYAGCKRKFDVDGYI+++ +LV ETKKRK+E+
Sbjct: 418 CMWSICGVHDQGWQERQIFGKIRYMNYAGCKRKFDVDGYIAHVKRLVTETKKRKAES 474
>ref|XP_002329850.1| predicted protein [Populus trichocarpa] gi|222871087|gb|EEF08218.1|
predicted protein [Populus trichocarpa]
Length = 503
Score = 504 bits (1297), Expect(2) = 0.0
Identities = 246/362 (67%), Positives = 289/362 (79%), Gaps = 3/362 (0%)
Frame = +3
Query: 57 PLQPGLVHGGRIRVLKPSSSSSTG--PVVYWMFRDQRASDNWALLHAADLAARSSAPLAV 230
P Q +V GRIRV+K S G PVVYWMFRDQR DNWAL+HA D A RS+ P+AV
Sbjct: 8 PTQNTIVQPGRIRVIKEGSRGQVGGGPVVYWMFRDQRLQDNWALIHAVDQANRSNVPVAV 67
Query: 231 VFNLFHRFLGAHARHLGFMIRGL-RLLSLRFQSLGIPFLLLRGDAVDTIPDLLYRCGASY 407
FNLF +FLGA AR LGFM+RGL +L S ++L IPF L G+A +TIP L CGAS
Sbjct: 68 AFNLFDQFLGAKARQLGFMLRGLCQLQSHIEETLQIPFFLFLGEAEETIPAFLKDCGASL 127
Query: 408 LVTDFSPLRQVRAWKDDICGRVGPGVAVHEVDAHNVVPLWVASQKLEYGARTIRGKIHKL 587
LVTDFSPLRQ R +D+IC RV V +HEVDAHNVVP+WVAS+KLEY ART+RGKI+KL
Sbjct: 128 LVTDFSPLRQFRTCQDEICKRVSDSVTIHEVDAHNVVPIWVASEKLEYSARTLRGKINKL 187
Query: 588 LPEYLVGFPELPVLENKWKAWDPPEIDWDELLADALRRGEDVPEIRWCEPGEEGAMEVLK 767
LPEYL+ FP L + +NKW A IDW++L+ + LR+G +VPEI+WCEPGE+ AMEVL
Sbjct: 188 LPEYLIDFPMLQLPKNKWVAATKQSIDWNDLIDNVLRKGAEVPEIKWCEPGEDAAMEVLM 247
Query: 768 GSKDGFFTKRLKNYESGRNDPLKPKGLSGLSPYLHFGQISAQRCALDAQALRKSHPKSVD 947
GSKDGF T+RLKNY + RN+PLKPKGLSGLSPYLHFGQISAQRCAL+A+ +R P+S D
Sbjct: 248 GSKDGFLTQRLKNYSTDRNNPLKPKGLSGLSPYLHFGQISAQRCALEARKVRNLSPQSAD 307
Query: 948 AFLEELIVRRELADNFCYYQPHYDSLQGAWEWAQKTLMDHAGDKREHIYTKEQLEKAKTA 1127
AFLEELIVRRELADNFC+YQP+YDS+ GAWEWA+KTL DHA DKREHIY+KEQLEKA+TA
Sbjct: 308 AFLEELIVRRELADNFCFYQPNYDSIHGAWEWARKTLADHASDKREHIYSKEQLEKAQTA 367
Query: 1128 DP 1133
DP
Sbjct: 368 DP 369
Score = 220 bits (560), Expect(2) = 0.0
Identities = 101/140 (72%), Positives = 116/140 (82%), Gaps = 6/140 (4%)
Frame = +2
Query: 1217 LWNAAQLEMVHYGKMHGFMR------MYWAKKILEWTTGPEEALSVAIYLNDKYEIDGRD 1378
LWNA+QLEMV +GKMHGFMR MYWAKKILEWT GPEEAL+++IYLNDKYEIDGRD
Sbjct: 370 LWNASQLEMVCHGKMHGFMRQKTLCSMYWAKKILEWTRGPEEALAISIYLNDKYEIDGRD 429
Query: 1379 PNGYVGCMWSICGIHDQGWKERPVFGKIRYMNYAGCKRKFDVDGYISYINKLVFETKKRK 1558
P GYVGCMWSICGIHDQGWKERP+FGKIRYMNYAGCKRKF+VDGYI+Y+ ++V + KKRK
Sbjct: 430 PGGYVGCMWSICGIHDQGWKERPIFGKIRYMNYAGCKRKFNVDGYITYVKRIVGDMKKRK 489
Query: 1559 SEAISAPIANHVQKVMRSRP 1618
+E N + K M+ P
Sbjct: 490 AE-------NELHKTMKELP 502
>ref|XP_004147572.1| PREDICTED: deoxyribodipyrimidine photo-lyase-like [Cucumis sativus]
gi|449517475|ref|XP_004165771.1| PREDICTED:
deoxyribodipyrimidine photo-lyase-like [Cucumis sativus]
gi|13383259|dbj|BAB39480.1| CPD photolyase [Cucumis
sativus] gi|20387244|dbj|BAB91322.1| CPD photolyase
[Cucumis sativus]
Length = 489
Score = 490 bits (1262), Expect(2) = 0.0
Identities = 238/350 (68%), Positives = 282/350 (80%), Gaps = 1/350 (0%)
Frame = +3
Query: 87 RIRVLKPSSSSSTGPVVYWMFRDQRASDNWALLHAADLAARSSAPLAVVFNLFHRFLGAH 266
R RVLK + S GPVVYWMFRDQR DNWAL+HA D A R++ P+AV FNLF RFLGA
Sbjct: 13 RFRVLK-DGTGSLGPVVYWMFRDQRVKDNWALIHAVDEANRANVPVAVAFNLFDRFLGAK 71
Query: 267 ARHLGFMIRGLRLLSLRFQ-SLGIPFLLLRGDAVDTIPDLLYRCGASYLVTDFSPLRQVR 443
+R LGFM+RGL+ L Q +L IPF L +G+A TIP+ + CGAS LVTDFSPLR+VR
Sbjct: 72 SRQLGFMLRGLQQLQHDIQETLQIPFFLFQGEAEQTIPNFIRECGASLLVTDFSPLREVR 131
Query: 444 AWKDDICGRVGPGVAVHEVDAHNVVPLWVASQKLEYGARTIRGKIHKLLPEYLVGFPELP 623
K++IC RV V VHEVDAHNVVP WVAS+KLEY A+T+RGKI+K LP+YL+ +P +
Sbjct: 132 KCKEEICKRVEESVKVHEVDAHNVVPTWVASEKLEYSAKTLRGKINKKLPDYLIDYPSMV 191
Query: 624 VLENKWKAWDPPEIDWDELLADALRRGEDVPEIRWCEPGEEGAMEVLKGSKDGFFTKRLK 803
+ KW + D IDWD L+ D LR+G DVPE+ WC+PGE+ AMEVL GSKDGF TKRLK
Sbjct: 192 IPTRKWPSADK-FIDWDRLIDDNLRKGADVPELEWCKPGEKAAMEVLMGSKDGFLTKRLK 250
Query: 804 NYESGRNDPLKPKGLSGLSPYLHFGQISAQRCALDAQALRKSHPKSVDAFLEELIVRREL 983
Y RN+PLKPKGLSGLSPYLHFGQISAQRCAL+A+++RK +P++VD FLEELIVRREL
Sbjct: 251 GYAIDRNNPLKPKGLSGLSPYLHFGQISAQRCALEARSIRKLNPQAVDVFLEELIVRREL 310
Query: 984 ADNFCYYQPHYDSLQGAWEWAQKTLMDHAGDKREHIYTKEQLEKAKTADP 1133
ADN+CYYQPHYDSL GAWEWA+KTLMDHA DKRE+IYT+EQLEKA+TADP
Sbjct: 311 ADNYCYYQPHYDSLLGAWEWARKTLMDHASDKREYIYTREQLEKAQTADP 360
Score = 233 bits (593), Expect(2) = 0.0
Identities = 102/116 (87%), Positives = 108/116 (93%)
Frame = +2
Query: 1217 LWNAAQLEMVHYGKMHGFMRMYWAKKILEWTTGPEEALSVAIYLNDKYEIDGRDPNGYVG 1396
LWNAAQLEM H+GKMHGFMRMYWAKKILEWT GPEEAL + IYLNDKYEIDGRDPNGYVG
Sbjct: 361 LWNAAQLEMAHHGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEIDGRDPNGYVG 420
Query: 1397 CMWSICGIHDQGWKERPVFGKIRYMNYAGCKRKFDVDGYISYINKLVFETKKRKSE 1564
CMWSICG+HDQGWKERPVFGKIRYMNYAGCKRKFDVDGYI+Y+ +LV E KKRK E
Sbjct: 421 CMWSICGVHDQGWKERPVFGKIRYMNYAGCKRKFDVDGYIAYVKRLVGEIKKRKPE 476
>ref|NP_001238710.1| CPD photolyase [Glycine max] gi|169159213|dbj|BAG12106.1| CPD
photolyase [Glycine max]
Length = 500
Score = 484 bits (1247), Expect(2) = 0.0
Identities = 240/361 (66%), Positives = 276/361 (76%), Gaps = 5/361 (1%)
Frame = +3
Query: 66 PGLVHGGRIRVLKPSS--SSSTGPVVYWMFRDQRASDNWALLHAADLAARSSAPLAVVFN 239
P V GR+R LK S S GPVVYWMFRDQR +DNWAL+HA A +++ P+AVVFN
Sbjct: 7 PMTVQAGRVRTLKEGSRGESGLGPVVYWMFRDQRVTDNWALIHAVAEANKANVPVAVVFN 66
Query: 240 LFHRFLGAHARHLGFMIRGLRLLSLRFQSLGI-PFLLLRGDAVDTIPDLLYRCGASYLVT 416
LFH FLGA +RHLGFM+RGLR L R Q P L +G+A +T+P L CGAS LVT
Sbjct: 67 LFHTFLGAKSRHLGFMLRGLRQLCHRMQHYSSNPLFLFQGEADETVPKFLRECGASLLVT 126
Query: 417 DFSPLRQVRAWKDDICGRVGPGVAVHEVDAHNVVPLWVASQKLEYGARTIRGKIHKLLPE 596
DFSPLR+VR K++IC RV VAVHEVDAHNVVPLWVAS KLEY ARTIR KI K L +
Sbjct: 127 DFSPLREVRRCKEEICKRVSDSVAVHEVDAHNVVPLWVASDKLEYSARTIRAKITKRLSD 186
Query: 597 YLVGFPELPVLE--NKWKAWDPPEIDWDELLADALRRGEDVPEIRWCEPGEEGAMEVLKG 770
YLV FP++ V KW A + IDWD+L+AD LRRG +VPE+ WCEPGE A EVL G
Sbjct: 187 YLVDFPDIEVEPPAGKWVATENHSIDWDDLIADVLRRGAEVPEVDWCEPGEIAASEVLMG 246
Query: 771 SKDGFFTKRLKNYESGRNDPLKPKGLSGLSPYLHFGQISAQRCALDAQALRKSHPKSVDA 950
SK+GF TKRLK Y RN+P P LSGLSPYLHFGQISAQRCAL+A+ R SHP+++DA
Sbjct: 247 SKNGFLTKRLKGYSLDRNNPCHPNALSGLSPYLHFGQISAQRCALEARKRRNSHPQAIDA 306
Query: 951 FLEELIVRRELADNFCYYQPHYDSLQGAWEWAQKTLMDHAGDKREHIYTKEQLEKAKTAD 1130
FLEELIVRRELADN+C+YQPHYDSL+GAW WAQ TL +HA DKREHIYTKEQLEKA+TAD
Sbjct: 307 FLEELIVRRELADNYCFYQPHYDSLKGAWAWAQNTLTEHATDKREHIYTKEQLEKAQTAD 366
Query: 1131 P 1133
P
Sbjct: 367 P 367
Score = 236 bits (602), Expect(2) = 0.0
Identities = 105/132 (79%), Positives = 119/132 (90%)
Frame = +2
Query: 1217 LWNAAQLEMVHYGKMHGFMRMYWAKKILEWTTGPEEALSVAIYLNDKYEIDGRDPNGYVG 1396
LWNA+QLEMVHYGKMHGFMRMYWAKKILEWT GPEEAL +++YLNDKYE+DGRDPNGYVG
Sbjct: 368 LWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEISLYLNDKYELDGRDPNGYVG 427
Query: 1397 CMWSICGIHDQGWKERPVFGKIRYMNYAGCKRKFDVDGYISYINKLVFETKKRKSEAISA 1576
CMWSICG+HDQGWKERP+FGKIRYMNYAGCKRKFDVD YI+Y+NKLV E KKRK+E
Sbjct: 428 CMWSICGVHDQGWKERPIFGKIRYMNYAGCKRKFDVDKYIAYVNKLVRELKKRKAE---- 483
Query: 1577 PIANHVQKVMRS 1612
+ + +KV+RS
Sbjct: 484 NLLSQKEKVVRS 495
>gb|AAP31406.1| CPD photolyase [Spinacia oleracea] gi|30421159|gb|AAP31407.1| CPD
photolyase [Spinacia oleracea]
Length = 491
Score = 478 bits (1231), Expect(2) = 0.0
Identities = 234/360 (65%), Positives = 282/360 (78%), Gaps = 1/360 (0%)
Frame = +3
Query: 57 PLQPGLVHGGRIRVLKPSSSSSTGPVVYWMFRDQRASDNWALLHAADLAARSSAPLAVVF 236
P+ V RIRVLKP S+ + G VVYWMFRDQR DNWAL+HA D A + +AP+AV F
Sbjct: 5 PVPTTTVQPERIRVLKPGSNPN-GAVVYWMFRDQRVRDNWALIHAVDEANKRNAPVAVAF 63
Query: 237 NLFHRFLGAHARHLGFMIRGLRLLSLRFQ-SLGIPFLLLRGDAVDTIPDLLYRCGASYLV 413
NLF F GA+AR LGFM+RGL+LL SL IPF L +G+ V+TIP L CGAS LV
Sbjct: 64 NLFDGFKGANARQLGFMLRGLKLLQASLHNSLHIPFFLFQGEVVETIPKFLVECGASLLV 123
Query: 414 TDFSPLRQVRAWKDDICGRVGPGVAVHEVDAHNVVPLWVASQKLEYGARTIRGKIHKLLP 593
TDF+PLR++R +K+++C RVG V++HEVDAHNVVP+W AS KLEYGARTIR KI+KLLP
Sbjct: 124 TDFTPLREIRGFKEELCKRVGDSVSIHEVDAHNVVPVWEASSKLEYGARTIRTKINKLLP 183
Query: 594 EYLVGFPELPVLENKWKAWDPPEIDWDELLADALRRGEDVPEIRWCEPGEEGAMEVLKGS 773
YL +P L W++ P I WD+L+ D L++G +VPEI WC+PGE A+EVLKGS
Sbjct: 184 TYLTDYPILQPPNCSWES-SSPVIQWDQLIEDRLKKGAEVPEIDWCKPGETAALEVLKGS 242
Query: 774 KDGFFTKRLKNYESGRNDPLKPKGLSGLSPYLHFGQISAQRCALDAQALRKSHPKSVDAF 953
++GF TKRLK+Y + RN PLKP LSGLSPYLHFGQISAQRCA +A+ +RK P++VDAF
Sbjct: 243 QNGFLTKRLKSYATDRNIPLKPGALSGLSPYLHFGQISAQRCAFEARNVRKVAPEAVDAF 302
Query: 954 LEELIVRRELADNFCYYQPHYDSLQGAWEWAQKTLMDHAGDKREHIYTKEQLEKAKTADP 1133
EELIVRRELADNFCYYQP+YDSL GAWEWA+KTLMDHA DKREH+YT+EQLEKA+TADP
Sbjct: 303 TEELIVRRELADNFCYYQPNYDSLMGAWEWARKTLMDHASDKREHLYTREQLEKAQTADP 362
Score = 237 bits (604), Expect(2) = 0.0
Identities = 102/117 (87%), Positives = 115/117 (98%)
Frame = +2
Query: 1217 LWNAAQLEMVHYGKMHGFMRMYWAKKILEWTTGPEEALSVAIYLNDKYEIDGRDPNGYVG 1396
LWNA+QLEMVH+GKMHGFMRMYWAKKILEWT+GPEEAL++AIYLNDKYE+DGRDPNGYVG
Sbjct: 363 LWNASQLEMVHFGKMHGFMRMYWAKKILEWTSGPEEALAIAIYLNDKYEMDGRDPNGYVG 422
Query: 1397 CMWSICGIHDQGWKERPVFGKIRYMNYAGCKRKFDVDGYISYINKLVFETKKRKSEA 1567
CMWSICG+HDQGW+ERPVFGKIRYMNYAGCKRKF+VDGYI+Y+ KLV +TKKRK+EA
Sbjct: 423 CMWSICGLHDQGWRERPVFGKIRYMNYAGCKRKFNVDGYIAYVRKLVVDTKKRKAEA 479