BLASTX nr result

ID: Dioscorea21_contig00012820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012820
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW85466.1| hypothetical protein ZEAMMB73_095202 [Zea mays]        110   3e-40
ref|XP_002455453.1| hypothetical protein SORBIDRAFT_03g011050 [S...   110   3e-40
ref|NP_001130737.1| hypothetical protein [Zea mays] gi|194689986...   110   3e-40
ref|XP_003603020.1| Isocitrate dehydrogenase [Medicago truncatul...   114   3e-40
gb|AFK42281.1| unknown [Lotus japonicus]                              112   3e-40

>gb|AFW85466.1| hypothetical protein ZEAMMB73_095202 [Zea mays]
          Length = 366

 Score =  110 bits (274), Expect(2) = 3e-40
 Identities = 51/53 (96%), Positives = 51/53 (96%)
 Frame = +1

Query: 1   IIDNCCMMLVKNPSLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI 159
           IIDNCCM LVKNP LFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI
Sbjct: 235 IIDNCCMTLVKNPGLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI 287



 Score = 80.5 bits (197), Expect(2) = 3e-40
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +3

Query: 273 SAPDIAGKNLANPTALLLSSVMMLRHLNLNDKADRIHNAILNTI 404
           SAPDIAGKNLANPTAL+LS+VMMLRHL  NDKADRIHNAIL TI
Sbjct: 296 SAPDIAGKNLANPTALMLSAVMMLRHLQFNDKADRIHNAILQTI 339


>ref|XP_002455453.1| hypothetical protein SORBIDRAFT_03g011050 [Sorghum bicolor]
           gi|241927428|gb|EES00573.1| hypothetical protein
           SORBIDRAFT_03g011050 [Sorghum bicolor]
          Length = 365

 Score =  110 bits (274), Expect(2) = 3e-40
 Identities = 51/53 (96%), Positives = 51/53 (96%)
 Frame = +1

Query: 1   IIDNCCMMLVKNPSLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI 159
           IIDNCCM LVKNP LFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI
Sbjct: 234 IIDNCCMTLVKNPGLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI 286



 Score = 80.5 bits (197), Expect(2) = 3e-40
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +3

Query: 273 SAPDIAGKNLANPTALLLSSVMMLRHLNLNDKADRIHNAILNTI 404
           SAPDIAGKNLANPTAL+LS+VMMLRHL  NDKADRIHNAIL TI
Sbjct: 295 SAPDIAGKNLANPTALMLSAVMMLRHLQFNDKADRIHNAILQTI 338


>ref|NP_001130737.1| hypothetical protein [Zea mays] gi|194689986|gb|ACF79077.1| unknown
           [Zea mays] gi|223948473|gb|ACN28320.1| unknown [Zea
           mays] gi|238014100|gb|ACR38085.1| unknown [Zea mays]
           gi|414877033|tpg|DAA54164.1| TPA: hypothetical protein
           ZEAMMB73_152838 [Zea mays] gi|414877034|tpg|DAA54165.1|
           TPA: hypothetical protein ZEAMMB73_152838 [Zea mays]
          Length = 365

 Score =  110 bits (274), Expect(2) = 3e-40
 Identities = 51/53 (96%), Positives = 51/53 (96%)
 Frame = +1

Query: 1   IIDNCCMMLVKNPSLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI 159
           IIDNCCM LVKNP LFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI
Sbjct: 234 IIDNCCMTLVKNPGLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI 286



 Score = 80.5 bits (197), Expect(2) = 3e-40
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +3

Query: 273 SAPDIAGKNLANPTALLLSSVMMLRHLNLNDKADRIHNAILNTI 404
           SAPDIAGKNLANPTAL+LS+VMMLRHL  NDKADRIHNAIL TI
Sbjct: 295 SAPDIAGKNLANPTALMLSAVMMLRHLQFNDKADRIHNAILQTI 338


>ref|XP_003603020.1| Isocitrate dehydrogenase [Medicago truncatula]
           gi|355492068|gb|AES73271.1| Isocitrate dehydrogenase
           [Medicago truncatula]
          Length = 353

 Score =  114 bits (284), Expect(2) = 3e-40
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = +1

Query: 1   IIDNCCMMLVKNPSLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIA 162
           +IDNCCMMLVKNP+LFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIA
Sbjct: 222 VIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIA 275



 Score = 76.6 bits (187), Expect(2) = 3e-40
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +3

Query: 273 SAPDIAGKNLANPTALLLSSVMMLRHLNLNDKADRIHNAILNTI 404
           SAPDIAGKNLANPTALLLSSV MLRHL+L+DKAD I NAILNTI
Sbjct: 283 SAPDIAGKNLANPTALLLSSVTMLRHLDLHDKADGIQNAILNTI 326


>gb|AFK42281.1| unknown [Lotus japonicus]
          Length = 359

 Score =  112 bits (280), Expect(2) = 3e-40
 Identities = 51/53 (96%), Positives = 53/53 (100%)
 Frame = +1

Query: 1   IIDNCCMMLVKNPSLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI 159
           +IDNCCMMLVKNP+LFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI
Sbjct: 228 VIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI 280



 Score = 77.8 bits (190), Expect(2) = 3e-40
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +3

Query: 273 SAPDIAGKNLANPTALLLSSVMMLRHLNLNDKADRIHNAILNTI 404
           SAPDIAGKNLANPTALLLS V MLRHL+L+DKADRI NAILNTI
Sbjct: 289 SAPDIAGKNLANPTALLLSGVTMLRHLDLHDKADRIQNAILNTI 332


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