BLASTX nr result

ID: Dioscorea21_contig00012799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012799
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001045721.1| Os02g0121800 [Oryza sativa Japonica Group] g...    92   1e-16
ref|XP_002447454.1| hypothetical protein SORBIDRAFT_06g001280 [S...    91   2e-16
gb|EAY84260.1| hypothetical protein OsI_05640 [Oryza sativa Indi...    87   3e-15
ref|XP_003563128.1| PREDICTED: uncharacterized protein LOC100828...    87   4e-15
ref|NP_001059806.1| Os07g0521000 [Oryza sativa Japonica Group] g...    86   6e-15

>ref|NP_001045721.1| Os02g0121800 [Oryza sativa Japonica Group]
           gi|14861488|gb|AAK73694.1| succinate dehydrogenase
           subunit 3 [Oryza sativa] gi|41052751|dbj|BAD07607.1|
           succinate dehydrogenase subunit 3 [Oryza sativa Japonica
           Group] gi|113535252|dbj|BAF07635.1| Os02g0121800 [Oryza
           sativa Japonica Group] gi|215737053|dbj|BAG95982.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222622073|gb|EEE56205.1| hypothetical protein
           OsJ_05172 [Oryza sativa Japonica Group]
          Length = 129

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 62/122 (50%), Positives = 75/122 (61%), Gaps = 14/122 (11%)
 Frame = -2

Query: 660 FESKPAASRGFL--SGTSF---DLLRNRNSVTGSLGSQTSVP---------PLGSRPLHA 523
           F   P A RG L  SG+SF   D LR  +++  + G  TS P         P G RPLH 
Sbjct: 13  FRDAPFALRGALGSSGSSFSSIDSLRRSSTLEQARG-YTSRPLGAVRPKMLPSGCRPLHT 71

Query: 522 SSILSESAKGITSNRPLSPNLILKKPQLSATYSISHRIFGAALGTAILITPILMKFSVVY 343
           S  LS       +NRPLSP+L LKKPQLSAT+SISHRIFGAALG AI+  P+  KFS+++
Sbjct: 72  SHPLSAPV----ANRPLSPHLPLKKPQLSATFSISHRIFGAALGAAIISIPLATKFSLMF 127

Query: 342 DV 337
           DV
Sbjct: 128 DV 129


>ref|XP_002447454.1| hypothetical protein SORBIDRAFT_06g001280 [Sorghum bicolor]
           gi|241938637|gb|EES11782.1| hypothetical protein
           SORBIDRAFT_06g001280 [Sorghum bicolor]
          Length = 117

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 53/105 (50%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
 Frame = -2

Query: 648 PAASRGFLSGTSFDLLRNRNSVTGSLGSQT-SVPPLGSRPLHASSILSESAKGITSNRPL 472
           P A RG L  TS +L + R   +  L +Q   +   GSRPLH S  LS       +NRPL
Sbjct: 17  PFALRGALGSTSSNLEQTRGYASSPLAAQRPKISAPGSRPLHTSRPLSSPV----ANRPL 72

Query: 471 SPNLILKKPQLSATYSISHRIFGAALGTAILITPILMKFSVVYDV 337
           SP+L LKKPQ SAT+SISHRIFG ALG AI+  P+  KFS+++ V
Sbjct: 73  SPHLPLKKPQFSATFSISHRIFGVALGVAIISVPLATKFSLMFGV 117


>gb|EAY84260.1| hypothetical protein OsI_05640 [Oryza sativa Indica Group]
          Length = 168

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 56/108 (51%), Positives = 69/108 (63%), Gaps = 12/108 (11%)
 Frame = -2

Query: 624 SGTSF---DLLRNRNSVTGSLGSQTSVP---------PLGSRPLHASSILSESAKGITSN 481
           SG+SF   D LR  +++  + G  TS P         P G RPLH S  LS       +N
Sbjct: 66  SGSSFSSIDSLRRSSTLEQARG-YTSRPLGAVRPKMLPSGCRPLHTSHPLSAPV----AN 120

Query: 480 RPLSPNLILKKPQLSATYSISHRIFGAALGTAILITPILMKFSVVYDV 337
           RPLSP+L LKKPQLSAT+SISHRIFGAALG AI+  P+  KFS+++DV
Sbjct: 121 RPLSPHLPLKKPQLSATFSISHRIFGAALGAAIISIPLATKFSLMFDV 168


>ref|XP_003563128.1| PREDICTED: uncharacterized protein LOC100828671 [Brachypodium
           distachyon]
          Length = 129

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 57/122 (46%), Positives = 73/122 (59%), Gaps = 13/122 (10%)
 Frame = -2

Query: 663 AFESKPAASRGFLS--GTSFDLL---RNRNSVTGS--------LGSQTSVPPLGSRPLHA 523
           AF+  P A RG L    +SFD +   R+ +S+  +        +     V P  SR LHA
Sbjct: 12  AFKDTPFALRGALGIPNSSFDSMDGFRDFSSIRQARSYASCPLVAGHLKVSPSESRSLHA 71

Query: 522 SSILSESAKGITSNRPLSPNLILKKPQLSATYSISHRIFGAALGTAILITPILMKFSVVY 343
           S  LS    G  +NRPLSP+L LKKPQLSAT+SISHRIFG ALG AI+  P   +FS+++
Sbjct: 72  SRSLS----GPVANRPLSPHLPLKKPQLSATFSISHRIFGVALGAAIISVPFATEFSLMF 127

Query: 342 DV 337
           DV
Sbjct: 128 DV 129


>ref|NP_001059806.1| Os07g0521000 [Oryza sativa Japonica Group]
           gi|14861490|gb|AAK73695.1|AF362742_1 succinate
           dehydrogenase subunit 3 [Oryza sativa]
           gi|34393293|dbj|BAC83222.1| succinate dehydrogenase
           subunit 3 [Oryza sativa Japonica Group]
           gi|113611342|dbj|BAF21720.1| Os07g0521000 [Oryza sativa
           Japonica Group] gi|125600467|gb|EAZ40043.1| hypothetical
           protein OsJ_24481 [Oryza sativa Japonica Group]
           gi|215765011|dbj|BAG86708.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 129

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 57/117 (48%), Positives = 73/117 (62%), Gaps = 13/117 (11%)
 Frame = -2

Query: 648 PAASRGFL--SGTSFDLLRN--RNSVTGSLGSQTSVP---------PLGSRPLHASSILS 508
           P A RG L  S +SF+ + +  ++S +G   S TS P         P G+R LH S  LS
Sbjct: 17  PFALRGALGSSNSSFNNIDHLRQSSSSGQARSYTSSPLGALRPKMFPSGNRLLHTSRPLS 76

Query: 507 ESAKGITSNRPLSPNLILKKPQLSATYSISHRIFGAALGTAILITPILMKFSVVYDV 337
                  +NRPLSP+L LKKPQLSAT+SISHRIFGAALG  I+  P+  KFS+++DV
Sbjct: 77  APV----ANRPLSPHLPLKKPQLSATFSISHRIFGAALGAVIISIPLATKFSLMFDV 129


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