BLASTX nr result

ID: Dioscorea21_contig00012784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012784
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis v...   116   2e-24
emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]   116   2e-24
gb|ADR71240.1| 60S ribosomal protein L3B [Hevea brasiliensis]         115   3e-24
gb|ADR71239.1| 60S ribosomal protein L3A [Hevea brasiliensis]         115   3e-24
gb|AFG47248.1| Pinus taeda anonymous locus 2_207_02 genomic sequ...   115   3e-24

>ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis vinifera]
           gi|297739519|emb|CBI29701.3| unnamed protein product
           [Vitis vinifera]
          Length = 389

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/67 (83%), Positives = 58/67 (86%)
 Frame = +3

Query: 3   GMTHIVREVDKPGSKLHKKETCEAVTIIETPPMXXXXXXXXXKTPRGLRSLNTVWAQHLS 182
           GMTHIVREV+KPGSKLHKKETCEAVTIIETPPM         KTPRGLRSLNTVWAQHLS
Sbjct: 52  GMTHIVREVEKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLS 111

Query: 183 EEVRRRF 203
           EEV+RRF
Sbjct: 112 EEVKRRF 118


>emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]
          Length = 389

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/67 (83%), Positives = 58/67 (86%)
 Frame = +3

Query: 3   GMTHIVREVDKPGSKLHKKETCEAVTIIETPPMXXXXXXXXXKTPRGLRSLNTVWAQHLS 182
           GMTHIVREV+KPGSKLHKKETCEAVTIIETPPM         KTPRGLRSLNTVWAQHLS
Sbjct: 52  GMTHIVREVEKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLS 111

Query: 183 EEVRRRF 203
           EEV+RRF
Sbjct: 112 EEVKRRF 118


>gb|ADR71240.1| 60S ribosomal protein L3B [Hevea brasiliensis]
          Length = 389

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/67 (82%), Positives = 58/67 (86%)
 Frame = +3

Query: 3   GMTHIVREVDKPGSKLHKKETCEAVTIIETPPMXXXXXXXXXKTPRGLRSLNTVWAQHLS 182
           GMTHIVREV+KPGSKLHKKETCEAVTI+ETPPM         KTPRGLR+LNTVWAQHLS
Sbjct: 52  GMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLS 111

Query: 183 EEVRRRF 203
           EEVRRRF
Sbjct: 112 EEVRRRF 118


>gb|ADR71239.1| 60S ribosomal protein L3A [Hevea brasiliensis]
          Length = 389

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/67 (82%), Positives = 58/67 (86%)
 Frame = +3

Query: 3   GMTHIVREVDKPGSKLHKKETCEAVTIIETPPMXXXXXXXXXKTPRGLRSLNTVWAQHLS 182
           GMTHIVREV+KPGSKLHKKETCEAVTI+ETPPM         KTPRGLR+LNTVWAQHLS
Sbjct: 52  GMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLS 111

Query: 183 EEVRRRF 203
           EEVRRRF
Sbjct: 112 EEVRRRF 118


>gb|AFG47248.1| Pinus taeda anonymous locus 2_207_02 genomic sequence
          Length = 143

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/67 (82%), Positives = 58/67 (86%)
 Frame = +3

Query: 3   GMTHIVREVDKPGSKLHKKETCEAVTIIETPPMXXXXXXXXXKTPRGLRSLNTVWAQHLS 182
           GMTHIVREV+KPGSKLHKKETCEAVT+IETPPM         KTPRGLR+LNTVWAQHLS
Sbjct: 56  GMTHIVREVEKPGSKLHKKETCEAVTVIETPPMVIVGVVGYIKTPRGLRTLNTVWAQHLS 115

Query: 183 EEVRRRF 203
           EEVRRRF
Sbjct: 116 EEVRRRF 122


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