BLASTX nr result

ID: Dioscorea21_contig00012779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012779
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
gb|ABK95784.1| unknown [Populus trichocarpa]                           93   2e-17
ref|NP_001236832.1| uncharacterized protein LOC100306054 [Glycin...    91   1e-16
ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis...    90   2e-16
ref|XP_002532881.1| DAG protein, chloroplast precursor, putative...    89   3e-16

>ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|222852411|gb|EEE89958.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 53/89 (59%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
 Frame = +1

Query: 94  TCLPSSPFLGAVRPRASPAVLSH--ETLRVLAPAALRMIPIRCRVNRAGGSGYSPLNSDS 267
           T LPS P L   +   S   LSH  +++      A R   IRCRVNRAG SGYSPLNS  
Sbjct: 31  THLPSPPTLLCGQSLPS---LSHNLQSINKTTSPAARFTSIRCRVNRAGNSGYSPLNS-- 85

Query: 268 GSGSGFTDRPPAEMAPLFPGCDYEHWLIV 354
             GS F+DRPP EMAPLFPGCDYEHWLIV
Sbjct: 86  --GSNFSDRPPNEMAPLFPGCDYEHWLIV 112


>gb|ABK95784.1| unknown [Populus trichocarpa]
          Length = 241

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 56/104 (53%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
 Frame = +1

Query: 49  LVSKRFLFSGTFSRPTCLPSSPFLGAVRP-RASPAVLSHETLRVLAPA-ALRMIPIRCRV 222
           L+ KR L + + + P  LP+      V P R S   LSH    +       R   IRCRV
Sbjct: 19  LLPKRLLSTFSITHPPSLPT------VLPCRQSLPSLSHALQSINKTTNPTRFTSIRCRV 72

Query: 223 NRAGGSGYSPLNSDSGSGSGFTDRPPAEMAPLFPGCDYEHWLIV 354
           NRAG SGYSPLNS    GS F+DRPP EMAPLFPGCDYEHWLIV
Sbjct: 73  NRAGNSGYSPLNS----GSNFSDRPPNEMAPLFPGCDYEHWLIV 112


>ref|NP_001236832.1| uncharacterized protein LOC100306054 [Glycine max]
           gi|255627403|gb|ACU14046.1| unknown [Glycine max]
          Length = 241

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/67 (67%), Positives = 49/67 (73%)
 Frame = +1

Query: 154 LSHETLRVLAPAALRMIPIRCRVNRAGGSGYSPLNSDSGSGSGFTDRPPAEMAPLFPGCD 333
           LSH     + P + R+  IRCRVNRAG S YSPLNS S S S F+DRPP EMAPLFPGCD
Sbjct: 47  LSH----AIVPPSTRVAGIRCRVNRAGDSAYSPLNSGSSSSS-FSDRPPTEMAPLFPGCD 101

Query: 334 YEHWLIV 354
           Y HWLIV
Sbjct: 102 YNHWLIV 108


>ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis vinifera]
           gi|147779193|emb|CAN67991.1| hypothetical protein
           VITISV_023920 [Vitis vinifera]
          Length = 233

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/73 (63%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
 Frame = +1

Query: 145 PAVLSHETLRVLAPAAL---RMIPIRCRVNRAGGSGYSPLNSDSGSGSGFTDRPPAEMAP 315
           P+V     LRV++P +    R  P+RCRVNR+G S YSPLNS    GS F+DRPP EMAP
Sbjct: 37  PSVQFSRALRVVSPGSAGSSRFTPVRCRVNRSGDS-YSPLNS----GSNFSDRPPTEMAP 91

Query: 316 LFPGCDYEHWLIV 354
           LFPGCDYEHWLIV
Sbjct: 92  LFPGCDYEHWLIV 104


>ref|XP_002532881.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
           gi|223527366|gb|EEF29510.1| DAG protein, chloroplast
           precursor, putative [Ricinus communis]
          Length = 248

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 55/110 (50%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
 Frame = +1

Query: 49  LVSKRFLFSGTFSRPTCLPSSPFLGAVRPRASPAVLSHETLRVLAPAA--------LRMI 204
           L+ KR L + T +  T   S+  +  + P   P++L   T R L P +         R  
Sbjct: 18  LLPKRLLSTITTTTTTATTSTTSI--ICPPLPPSLLF--TRRSLLPLSHAVHSIKPTRFT 73

Query: 205 PIRCRVNRAGGSGYSPLNSDSGSGSGFTDRPPAEMAPLFPGCDYEHWLIV 354
            IRCRVNRAG S YSPLNS    GS F+DRPP EMAPLFPGCDYEHWLIV
Sbjct: 74  SIRCRVNRAGNSAYSPLNS----GSNFSDRPPNEMAPLFPGCDYEHWLIV 119


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