BLASTX nr result

ID: Dioscorea21_contig00012776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012776
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003573637.1| PREDICTED: RNA polymerase II-associated prot...   152   3e-35
ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
gb|EEE62210.1| hypothetical protein OsJ_16997 [Oryza sativa Japo...   150   1e-34
gb|EEC78452.1| hypothetical protein OsI_18314 [Oryza sativa Indi...   150   1e-34
ref|NP_001054548.1| Os05g0129900 [Oryza sativa Japonica Group] g...   150   1e-34

>ref|XP_003573637.1| PREDICTED: RNA polymerase II-associated protein 3-like
           [Brachypodium distachyon]
          Length = 382

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/120 (63%), Positives = 96/120 (80%)
 Frame = +2

Query: 65  KQEMETSVQELASLAASRVKVSAAKNITAPKSAYQFEVSWRALSDDPSLQTQLLKTIQPE 244
           K   E SVQ+LAS AASR   S  K++  PK+AY FEVSWRA+SDDP+ Q QLLK+I P 
Sbjct: 220 KSGPEISVQDLASRAASRYMSSTVKSVKTPKTAYDFEVSWRAISDDPAQQIQLLKSIPPA 279

Query: 245 TLPQIFKSALSTAMLIDIIKCTASFFKEDTELAISILDNLVKVPRFNMIVLSLSAMNHSE 424
           +LP+IFK+ALS+A LIDI+KCTAS F++D ELA+SILDNLVKV RF++I++ LS M+ SE
Sbjct: 280 SLPEIFKNALSSAFLIDIVKCTASIFRDDAELAVSILDNLVKVSRFDLIIMCLSPMHKSE 339


>ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|222857325|gb|EEE94872.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/143 (53%), Positives = 102/143 (71%)
 Frame = +2

Query: 2   RGGALPSSHGESTPINGAVNNKQEMETSVQELASLAASRVKVSAAKNITAPKSAYQFEVS 181
           R  A+PSS+ ES  + G    +QE++ SV+ELAS AASR    AAKNIT P SAYQFEVS
Sbjct: 303 RANAIPSSNAESIQVTG----RQELKASVKELASQAASRAMAEAAKNITPPNSAYQFEVS 358

Query: 182 WRALSDDPSLQTQLLKTIQPETLPQIFKSALSTAMLIDIIKCTASFFKEDTELAISILDN 361
           WR  S D +LQ  LLK + P  LPQIFK+ALS  +LIDIIKC +SFF +D +LA+  L+N
Sbjct: 359 WRGFSGDRALQAHLLKVVTPSALPQIFKNALSVTILIDIIKCVSSFFIDDMDLAVKYLEN 418

Query: 362 LVKVPRFNMIVLSLSAMNHSEEL 430
           L +VPRF+++++ L + + ++ L
Sbjct: 419 LTEVPRFDILIMCLPSTDKADLL 441


>gb|EEE62210.1| hypothetical protein OsJ_16997 [Oryza sativa Japonica Group]
          Length = 403

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/116 (62%), Positives = 94/116 (81%)
 Frame = +2

Query: 77  ETSVQELASLAASRVKVSAAKNITAPKSAYQFEVSWRALSDDPSLQTQLLKTIQPETLPQ 256
           E S+Q+LAS AASR   S  K++  PK+AY FEVSWRALS+D + QTQLLK+I P +LP+
Sbjct: 246 EASIQDLASRAASRYMASTVKSVKTPKTAYDFEVSWRALSNDTAKQTQLLKSIPPSSLPE 305

Query: 257 IFKSALSTAMLIDIIKCTASFFKEDTELAISILDNLVKVPRFNMIVLSLSAMNHSE 424
           IFK+ALS A LIDI+KCT S F+EDT LA+SIL+NL KVPRF++I++ LS+M+ SE
Sbjct: 306 IFKNALSAAFLIDIVKCTTSIFREDTMLAVSILENLAKVPRFDLIIMCLSSMHKSE 361


>gb|EEC78452.1| hypothetical protein OsI_18314 [Oryza sativa Indica Group]
          Length = 408

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/116 (62%), Positives = 94/116 (81%)
 Frame = +2

Query: 77  ETSVQELASLAASRVKVSAAKNITAPKSAYQFEVSWRALSDDPSLQTQLLKTIQPETLPQ 256
           E S+Q+LAS AASR   S  K++  PK+AY FEVSWRALS+D + QTQLLK+I P +LP+
Sbjct: 251 EASIQDLASRAASRYMASTVKSVKTPKTAYDFEVSWRALSNDTAKQTQLLKSIPPSSLPE 310

Query: 257 IFKSALSTAMLIDIIKCTASFFKEDTELAISILDNLVKVPRFNMIVLSLSAMNHSE 424
           IFK+ALS A LIDI+KCT S F+EDT LA+SIL+NL KVPRF++I++ LS+M+ SE
Sbjct: 311 IFKNALSAAFLIDIVKCTTSIFREDTMLAVSILENLAKVPRFDLIIMCLSSMHKSE 366


>ref|NP_001054548.1| Os05g0129900 [Oryza sativa Japonica Group]
           gi|113578099|dbj|BAF16462.1| Os05g0129900 [Oryza sativa
           Japonica Group] gi|215734871|dbj|BAG95593.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215765748|dbj|BAG87445.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 397

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/116 (62%), Positives = 94/116 (81%)
 Frame = +2

Query: 77  ETSVQELASLAASRVKVSAAKNITAPKSAYQFEVSWRALSDDPSLQTQLLKTIQPETLPQ 256
           E S+Q+LAS AASR   S  K++  PK+AY FEVSWRALS+D + QTQLLK+I P +LP+
Sbjct: 240 EASIQDLASRAASRYMASTVKSVKTPKTAYDFEVSWRALSNDTAKQTQLLKSIPPSSLPE 299

Query: 257 IFKSALSTAMLIDIIKCTASFFKEDTELAISILDNLVKVPRFNMIVLSLSAMNHSE 424
           IFK+ALS A LIDI+KCT S F+EDT LA+SIL+NL KVPRF++I++ LS+M+ SE
Sbjct: 300 IFKNALSAAFLIDIVKCTTSIFREDTMLAVSILENLAKVPRFDLIIMCLSSMHKSE 355


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