BLASTX nr result

ID: Dioscorea21_contig00012756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012756
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308390.1| predicted protein [Populus trichocarpa] gi|1...   331   5e-89
ref|XP_002523497.1| Transport protein particle subunit trs31, pu...   330   1e-88
gb|AFK42122.1| unknown [Lotus japonicus]                              328   3e-88
gb|AFK36498.1| unknown [Lotus japonicus]                              328   3e-88
ref|XP_002279200.1| PREDICTED: trafficking protein particle comp...   328   4e-88

>ref|XP_002308390.1| predicted protein [Populus trichocarpa] gi|118483059|gb|ABK93439.1|
           unknown [Populus trichocarpa]
           gi|222854366|gb|EEE91913.1| predicted protein [Populus
           trichocarpa]
          Length = 194

 Score =  331 bits (848), Expect = 5e-89
 Identities = 166/173 (95%), Positives = 169/173 (97%)
 Frame = -3

Query: 521 MIGAGKMKQYGNVLEKPLSKGRHEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 342
           MIG GK+KQY NVLEKPLSKG+ EVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 341 AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 162
           AVGARVLELLCHR+KGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 161 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGLQR 3
           KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEG QR
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQR 173


>ref|XP_002523497.1| Transport protein particle subunit trs31, putative [Ricinus
           communis] gi|223537204|gb|EEF38836.1| Transport protein
           particle subunit trs31, putative [Ricinus communis]
          Length = 194

 Score =  330 bits (845), Expect = 1e-88
 Identities = 165/173 (95%), Positives = 169/173 (97%)
 Frame = -3

Query: 521 MIGAGKMKQYGNVLEKPLSKGRHEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 342
           MIG GK+KQY NVL+KPLSKG+ EVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 341 AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 162
           AVGARVLELLCHREKGNRRETRLLGILSFVH+TVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHTTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 161 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGLQR 3
           KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEG QR
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQR 173


>gb|AFK42122.1| unknown [Lotus japonicus]
          Length = 194

 Score =  328 bits (842), Expect = 3e-88
 Identities = 164/173 (94%), Positives = 168/173 (97%)
 Frame = -3

Query: 521 MIGAGKMKQYGNVLEKPLSKGRHEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 342
           MIG GKMKQY NVL+KPL+KG+ EVSLSAFAFLFSELVQYNQTQVDNI ELERRLEDAGY
Sbjct: 1   MIGVGKMKQYSNVLDKPLTKGKQEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGY 60

Query: 341 AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 162
           AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 161 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGLQR 3
           KELLVN+FISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEG QR
Sbjct: 121 KELLVNKFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQR 173


>gb|AFK36498.1| unknown [Lotus japonicus]
          Length = 194

 Score =  328 bits (841), Expect = 3e-88
 Identities = 163/173 (94%), Positives = 168/173 (97%)
 Frame = -3

Query: 521 MIGAGKMKQYGNVLEKPLSKGRHEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 342
           MIG GKMKQY N+L+KPL+KG+ EVSLSAFAFLFSELVQYNQTQVDNI ELERRLEDAGY
Sbjct: 1   MIGVGKMKQYSNILDKPLTKGKQEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGY 60

Query: 341 AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 162
           AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 161 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGLQR 3
           KELLVN+FISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEG QR
Sbjct: 121 KELLVNKFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQR 173


>ref|XP_002279200.1| PREDICTED: trafficking protein particle complex subunit 5 [Vitis
           vinifera] gi|297743638|emb|CBI36521.3| unnamed protein
           product [Vitis vinifera]
          Length = 194

 Score =  328 bits (840), Expect = 4e-88
 Identities = 164/173 (94%), Positives = 168/173 (97%)
 Frame = -3

Query: 521 MIGAGKMKQYGNVLEKPLSKGRHEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 342
           MIG GK+KQY NVL+KPLSKG+ EVSLSAFAFLFSELVQYNQ QVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQAQVDNIAELERRLEDAGY 60

Query: 341 AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 162
           AVGARVLELLCHR+KGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 161 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGLQR 3
           KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEG QR
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQR 173


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