BLASTX nr result
ID: Dioscorea21_contig00012745
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00012745 (1021 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003574503.1| PREDICTED: F-box protein SKIP28-like [Brachy... 329 8e-88 ref|XP_002444372.1| hypothetical protein SORBIDRAFT_07g020870 [S... 319 6e-85 dbj|BAD01193.1| F-box protein family-like protein [Oryza sativa ... 306 4e-81 ref|NP_001061846.1| Os08g0428100 [Oryza sativa Japonica Group] g... 290 3e-76 gb|EEC83610.1| hypothetical protein OsI_29306 [Oryza sativa Indi... 282 1e-73 >ref|XP_003574503.1| PREDICTED: F-box protein SKIP28-like [Brachypodium distachyon] Length = 323 Score = 329 bits (843), Expect = 8e-88 Identities = 162/297 (54%), Positives = 201/297 (67%), Gaps = 9/297 (3%) Frame = +3 Query: 120 ASDPAPSPTDPHAALFLVLGYLRLPDLLAFQSVCRLFREAIAGDRLLWMRITVEPPLSGR 299 A PAP+P +PHAALFL LGY+RLPDLLA VCRL EA+AGD LLW R+TVEPPLS R Sbjct: 14 APAPAPAPGEPHAALFLALGYMRLPDLLACWRVCRLLGEAVAGDPLLWRRVTVEPPLSKR 73 Query: 300 LTDDALLQLTSRAGGTLKSLALLDCWKITDAGLLQVVDRNPTITELYIPGCTYLTADGVV 479 LTDDALL+LT+RA GTL+SL LL C ++DAGLL+VV+RNP++TELY+P CT LT DGVV Sbjct: 74 LTDDALLKLTARAEGTLRSLHLLGCSLVSDAGLLRVVERNPSVTELYVPKCTGLTGDGVV 133 Query: 480 SVVQRLSEXXXXXXXXXXXXXCNISRDHLDSLNYYLGINDHPQC---SKPSVYNHWMSLP 650 +VQ L E +++ HLD +N L +PQ +P YNH + Sbjct: 134 KIVQLLDEQNGNTNRLRLHGISRMTKHHLDIIN-SLMCKRNPQVKEDGRPLFYNHRVHEM 192 Query: 651 LNDNDDRPIDMDICPRCNNAGLVFDCTRENCRSMKYRWSV---CRGCFFCIARCQECGGC 821 LN ND+RPID+D+CP C N LVFDCTR++CR +Y W CRGC FC+ARC+ CGGC Sbjct: 193 LNTNDERPIDVDVCPMCKNVRLVFDCTRDDCRKAEYSWCQGWWCRGCLFCVARCENCGGC 252 Query: 822 IDFEELGEETI-CAHLLCIDCWLQLPKCSMCNRPYCK--GHINFRGSSPALFVCDQC 983 I E+L + + C+ +C+ CWL PKCS CNRPYC+ GH+ S P F C C Sbjct: 253 ISSEDLSDACLACSDFMCLACWLTFPKCSTCNRPYCERHGHLMVPLSLPGQFSCHHC 309 >ref|XP_002444372.1| hypothetical protein SORBIDRAFT_07g020870 [Sorghum bicolor] gi|241940722|gb|EES13867.1| hypothetical protein SORBIDRAFT_07g020870 [Sorghum bicolor] Length = 325 Score = 319 bits (818), Expect = 6e-85 Identities = 151/291 (51%), Positives = 195/291 (67%), Gaps = 3/291 (1%) Frame = +3 Query: 120 ASDPAPSPTDPHAALFLVLGYLRLPDLLAFQSVCRLFREAIAGDRLLWMRITVEPPLSGR 299 +S + SP +PHAAL L LGY+RL +LLA CR REA+AGD LLW+R+ VE PLS R Sbjct: 21 SSSSSSSPGEPHAALLLALGYMRLRELLACARACRSLREAVAGDPLLWLRLVVESPLSHR 80 Query: 300 LTDDALLQLTSRAGGTLKSLALLDCWKITDAGLLQVVDRNPTITELYIPGCTYLTADGVV 479 +TD+ALL LT RA G L+SL LL C +++DAGLL+VV+RNP +TEL++P CT LTADG+V Sbjct: 81 ITDEALLALTDRARGRLRSLHLLGCPRVSDAGLLRVVERNPNVTELFVPRCTGLTADGLV 140 Query: 480 SVVQRLSEXXXXXXXXXXXXXCNISRDHLDSLNYYLGINDHPQCSKPSVYNHWMSLPLND 659 ++ L C ++ HLD + + Q ++ YNH + LN Sbjct: 141 KIIHFLHGHKGNLSRVRLHGICKMTNHHLDVIKSLVCRGSQQQDAQALYYNHRVHEVLNT 200 Query: 660 NDDRPIDMDICPRCNNAGLVFDCTRENCRSMKYRWSVCRGCFFCIARCQECGGCIDFEEL 839 +D RPID+D+CP C N LVFDCTR+NCR +K WS CRGCFFC+ARC+ CGGCID EEL Sbjct: 201 DDGRPIDVDVCPLCRNVRLVFDCTRKNCREVKDGWSRCRGCFFCVARCETCGGCIDLEEL 260 Query: 840 GEETI-CAHLLCIDCWLQLPKCSMCNRPYCKGHINFRG--SSPALFVCDQC 983 GE + C+ LC+DCWL+LPKC CNRPYC+ H N + S+ F C +C Sbjct: 261 GESGLACSDFLCMDCWLKLPKCCTCNRPYCERHSNLKENLSASGEFTCQEC 311 >dbj|BAD01193.1| F-box protein family-like protein [Oryza sativa Japonica Group] gi|38175774|dbj|BAD01468.1| F-box protein family-like protein [Oryza sativa Japonica Group] Length = 889 Score = 306 bits (785), Expect = 4e-81 Identities = 156/307 (50%), Positives = 201/307 (65%), Gaps = 10/307 (3%) Frame = +3 Query: 117 NASDPAPSPT------DPHAALFLVLGYLRLPDLLAFQSVCRLFREAIAGDRLLWMRITV 278 +A+ P P P +PHAAL L L YL L +LL+ CR R+A+AGD LLW R+ V Sbjct: 577 SAAPPPPPPLPASPGGEPHAALLLSLAYLPLRELLSCAGACRRLRDAVAGDPLLWRRVAV 636 Query: 279 E-PPLSGRLTDDALLQLTSRAGGTLKSLALLDCWKITDAGLLQVVDRNPTITELYIPGCT 455 PPL+ RLTD+ALL LT RAGGTL+SL LL C +++DAGLL+VV+RNP ITELY+P CT Sbjct: 637 AAPPLARRLTDEALLALTGRAGGTLRSLRLLGCTRVSDAGLLRVVERNPGITELYMPRCT 696 Query: 456 YLTADGVVSVVQRLSEXXXXXXXXXXXXXCNISRDHLDSLNYYLGINDHPQCSKPSVYNH 635 LTA+GVV +VQ L E C +++ HLD+++ + + + + Y+H Sbjct: 697 GLTAEGVVKIVQVLYECKGNLNRIRLHGICRMTKHHLDAISSAMCKGNQQEDDQSLFYSH 756 Query: 636 WMSLPLNDNDDRPIDMDICPRCNNAGLVFDCTRENCRSMKYRWSVCRGCFFCIARCQECG 815 + LN ND+R ID+D+CP C N LVFDCTR+ CR K W+ CRGCFFC+ARC+ CG Sbjct: 757 RVHEVLNTNDERRIDVDVCPMCTNVRLVFDCTRDGCR-RKDSWAQCRGCFFCVARCETCG 815 Query: 816 GCIDFEELGE-ETICAHLLCIDCWLQLPKCSMCNRPYCKGHINFRG--SSPALFVCDQCG 986 GCID EEL E E C+ LC++CWL LPKCS CNRPYCK H N + S F C +C Sbjct: 816 GCIDLEELSETELACSDFLCMECWLPLPKCSTCNRPYCKRHENLKVDLSPSGQFTCHRC- 874 Query: 987 YDEFTTN 1007 EF++N Sbjct: 875 -VEFSSN 880 >ref|NP_001061846.1| Os08g0428100 [Oryza sativa Japonica Group] gi|113623815|dbj|BAF23760.1| Os08g0428100 [Oryza sativa Japonica Group] Length = 338 Score = 290 bits (743), Expect = 3e-76 Identities = 150/310 (48%), Positives = 192/310 (61%), Gaps = 31/310 (10%) Frame = +3 Query: 117 NASDPAPSPT------DPHAALFLVLGYLRLPDLLAFQSVCRLFREAIAGDRLLWMRITV 278 +A+ P P P +PHAAL L L YL L +LL+ CR R+A+AGD LLW R+ V Sbjct: 9 SAAPPPPPPLPASPGGEPHAALLLSLAYLPLRELLSCAGACRRLRDAVAGDPLLWRRVAV 68 Query: 279 E-PPLSGRLTDDALLQLTSRAGGTLKSLALLDCWKITDAGLLQVVDRNPTITE------- 434 PPL+ RLTD+ALL LT RAGGTL+SL LL C +++DAGLL+VV+RNP ITE Sbjct: 69 AAPPLARRLTDEALLALTGRAGGTLRSLRLLGCTRVSDAGLLRVVERNPGITEILSMESS 128 Query: 435 ----------------LYIPGCTYLTADGVVSVVQRLSEXXXXXXXXXXXXXCNISRDHL 566 LY+P CT LTA+GVV +VQ L E C +++ HL Sbjct: 129 TLLKDTMISTRAKIYKLYMPRCTGLTAEGVVKIVQVLYECKGNLNRIRLHGICRMTKHHL 188 Query: 567 DSLNYYLGINDHPQCSKPSVYNHWMSLPLNDNDDRPIDMDICPRCNNAGLVFDCTRENCR 746 D+++ + + + + Y+H + LN ND+R ID+D+CP C N LVFDCTR+ CR Sbjct: 189 DAISSAMCKGNQQEDDQSLFYSHRVHEVLNTNDERRIDVDVCPMCTNVRLVFDCTRDGCR 248 Query: 747 SMKYRWSVCRGCFFCIARCQECGGCIDFEELGE-ETICAHLLCIDCWLQLPKCSMCNRPY 923 K W+ CRGCFFC+ARC+ CGGCID EEL E E C+ LC++CWL LPKCS CNRPY Sbjct: 249 -RKDSWAQCRGCFFCVARCETCGGCIDLEELSETELACSDFLCMECWLPLPKCSTCNRPY 307 Query: 924 CKGHINFRGS 953 CK H N + S Sbjct: 308 CKRHENLKDS 317 >gb|EEC83610.1| hypothetical protein OsI_29306 [Oryza sativa Indica Group] Length = 358 Score = 282 bits (721), Expect = 1e-73 Identities = 146/301 (48%), Positives = 186/301 (61%), Gaps = 25/301 (8%) Frame = +3 Query: 129 PAPSPTDPHAALFLVLGYLRLPDLLAFQSVCRLFREAIAGDRLLWMRITVE-PPLSGRLT 305 PA +PHAAL L L YL L +LL+ CR R+A+AGD LLW R+ V PPL+ RLT Sbjct: 20 PASPGGEPHAALLLSLAYLPLRELLSCAGACRRLRDAVAGDPLLWRRVAVAAPPLARRLT 79 Query: 306 DDALLQLTSRAGGTLKSLALLDCWKITDAGLLQVVDRNPTITE----------------- 434 D+ALL LT RAGGTL+SL LL C +++D GLL+VV+RN ITE Sbjct: 80 DEALLALTGRAGGTLRSLRLLGCTRVSDTGLLRVVERNLGITEILSMESSTLLKDTMIST 139 Query: 435 ------LYIPGCTYLTADGVVSVVQRLSEXXXXXXXXXXXXXCNISRDHLDSLNYYLGIN 596 LY+P CT LTA+GVV +VQ L E C +++ HLD+++ + Sbjct: 140 RAKIYKLYMPRCTGLTAEGVVKIVQALYECKGNLNRIRLHGICRMTKHHLDAISSAMCKG 199 Query: 597 DHPQCSKPSVYNHWMSLPLNDNDDRPIDMDICPRCNNAGLVFDCTRENCRSMKYRWSVCR 776 + + + Y+H + LN ND+R ID+D+CP C N LVFDCTR+ CR R + CR Sbjct: 200 NQQKDDQSLFYSHRVHEVLNTNDERHIDVDVCPICTNVRLVFDCTRDGCRRKDSR-AQCR 258 Query: 777 GCFFCIARCQECGGCIDFEELGE-ETICAHLLCIDCWLQLPKCSMCNRPYCKGHINFRGS 953 GCFFC+ARC+ CGGCID EEL E E C+ LC++CWL LPKCS CNRPYCK H N + S Sbjct: 259 GCFFCVARCETCGGCIDLEELSETELACSDFLCMECWLPLPKCSTCNRPYCKRHENLKAS 318 Query: 954 S 956 S Sbjct: 319 S 319