BLASTX nr result

ID: Dioscorea21_contig00012745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012745
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574503.1| PREDICTED: F-box protein SKIP28-like [Brachy...   329   8e-88
ref|XP_002444372.1| hypothetical protein SORBIDRAFT_07g020870 [S...   319   6e-85
dbj|BAD01193.1| F-box protein family-like protein [Oryza sativa ...   306   4e-81
ref|NP_001061846.1| Os08g0428100 [Oryza sativa Japonica Group] g...   290   3e-76
gb|EEC83610.1| hypothetical protein OsI_29306 [Oryza sativa Indi...   282   1e-73

>ref|XP_003574503.1| PREDICTED: F-box protein SKIP28-like [Brachypodium distachyon]
          Length = 323

 Score =  329 bits (843), Expect = 8e-88
 Identities = 162/297 (54%), Positives = 201/297 (67%), Gaps = 9/297 (3%)
 Frame = +3

Query: 120 ASDPAPSPTDPHAALFLVLGYLRLPDLLAFQSVCRLFREAIAGDRLLWMRITVEPPLSGR 299
           A  PAP+P +PHAALFL LGY+RLPDLLA   VCRL  EA+AGD LLW R+TVEPPLS R
Sbjct: 14  APAPAPAPGEPHAALFLALGYMRLPDLLACWRVCRLLGEAVAGDPLLWRRVTVEPPLSKR 73

Query: 300 LTDDALLQLTSRAGGTLKSLALLDCWKITDAGLLQVVDRNPTITELYIPGCTYLTADGVV 479
           LTDDALL+LT+RA GTL+SL LL C  ++DAGLL+VV+RNP++TELY+P CT LT DGVV
Sbjct: 74  LTDDALLKLTARAEGTLRSLHLLGCSLVSDAGLLRVVERNPSVTELYVPKCTGLTGDGVV 133

Query: 480 SVVQRLSEXXXXXXXXXXXXXCNISRDHLDSLNYYLGINDHPQC---SKPSVYNHWMSLP 650
            +VQ L E               +++ HLD +N  L    +PQ     +P  YNH +   
Sbjct: 134 KIVQLLDEQNGNTNRLRLHGISRMTKHHLDIIN-SLMCKRNPQVKEDGRPLFYNHRVHEM 192

Query: 651 LNDNDDRPIDMDICPRCNNAGLVFDCTRENCRSMKYRWSV---CRGCFFCIARCQECGGC 821
           LN ND+RPID+D+CP C N  LVFDCTR++CR  +Y W     CRGC FC+ARC+ CGGC
Sbjct: 193 LNTNDERPIDVDVCPMCKNVRLVFDCTRDDCRKAEYSWCQGWWCRGCLFCVARCENCGGC 252

Query: 822 IDFEELGEETI-CAHLLCIDCWLQLPKCSMCNRPYCK--GHINFRGSSPALFVCDQC 983
           I  E+L +  + C+  +C+ CWL  PKCS CNRPYC+  GH+    S P  F C  C
Sbjct: 253 ISSEDLSDACLACSDFMCLACWLTFPKCSTCNRPYCERHGHLMVPLSLPGQFSCHHC 309


>ref|XP_002444372.1| hypothetical protein SORBIDRAFT_07g020870 [Sorghum bicolor]
           gi|241940722|gb|EES13867.1| hypothetical protein
           SORBIDRAFT_07g020870 [Sorghum bicolor]
          Length = 325

 Score =  319 bits (818), Expect = 6e-85
 Identities = 151/291 (51%), Positives = 195/291 (67%), Gaps = 3/291 (1%)
 Frame = +3

Query: 120 ASDPAPSPTDPHAALFLVLGYLRLPDLLAFQSVCRLFREAIAGDRLLWMRITVEPPLSGR 299
           +S  + SP +PHAAL L LGY+RL +LLA    CR  REA+AGD LLW+R+ VE PLS R
Sbjct: 21  SSSSSSSPGEPHAALLLALGYMRLRELLACARACRSLREAVAGDPLLWLRLVVESPLSHR 80

Query: 300 LTDDALLQLTSRAGGTLKSLALLDCWKITDAGLLQVVDRNPTITELYIPGCTYLTADGVV 479
           +TD+ALL LT RA G L+SL LL C +++DAGLL+VV+RNP +TEL++P CT LTADG+V
Sbjct: 81  ITDEALLALTDRARGRLRSLHLLGCPRVSDAGLLRVVERNPNVTELFVPRCTGLTADGLV 140

Query: 480 SVVQRLSEXXXXXXXXXXXXXCNISRDHLDSLNYYLGINDHPQCSKPSVYNHWMSLPLND 659
            ++  L               C ++  HLD +   +      Q ++   YNH +   LN 
Sbjct: 141 KIIHFLHGHKGNLSRVRLHGICKMTNHHLDVIKSLVCRGSQQQDAQALYYNHRVHEVLNT 200

Query: 660 NDDRPIDMDICPRCNNAGLVFDCTRENCRSMKYRWSVCRGCFFCIARCQECGGCIDFEEL 839
           +D RPID+D+CP C N  LVFDCTR+NCR +K  WS CRGCFFC+ARC+ CGGCID EEL
Sbjct: 201 DDGRPIDVDVCPLCRNVRLVFDCTRKNCREVKDGWSRCRGCFFCVARCETCGGCIDLEEL 260

Query: 840 GEETI-CAHLLCIDCWLQLPKCSMCNRPYCKGHINFRG--SSPALFVCDQC 983
           GE  + C+  LC+DCWL+LPKC  CNRPYC+ H N +   S+   F C +C
Sbjct: 261 GESGLACSDFLCMDCWLKLPKCCTCNRPYCERHSNLKENLSASGEFTCQEC 311


>dbj|BAD01193.1| F-box protein family-like protein [Oryza sativa Japonica Group]
            gi|38175774|dbj|BAD01468.1| F-box protein family-like
            protein [Oryza sativa Japonica Group]
          Length = 889

 Score =  306 bits (785), Expect = 4e-81
 Identities = 156/307 (50%), Positives = 201/307 (65%), Gaps = 10/307 (3%)
 Frame = +3

Query: 117  NASDPAPSPT------DPHAALFLVLGYLRLPDLLAFQSVCRLFREAIAGDRLLWMRITV 278
            +A+ P P P       +PHAAL L L YL L +LL+    CR  R+A+AGD LLW R+ V
Sbjct: 577  SAAPPPPPPLPASPGGEPHAALLLSLAYLPLRELLSCAGACRRLRDAVAGDPLLWRRVAV 636

Query: 279  E-PPLSGRLTDDALLQLTSRAGGTLKSLALLDCWKITDAGLLQVVDRNPTITELYIPGCT 455
              PPL+ RLTD+ALL LT RAGGTL+SL LL C +++DAGLL+VV+RNP ITELY+P CT
Sbjct: 637  AAPPLARRLTDEALLALTGRAGGTLRSLRLLGCTRVSDAGLLRVVERNPGITELYMPRCT 696

Query: 456  YLTADGVVSVVQRLSEXXXXXXXXXXXXXCNISRDHLDSLNYYLGINDHPQCSKPSVYNH 635
             LTA+GVV +VQ L E             C +++ HLD+++  +   +  +  +   Y+H
Sbjct: 697  GLTAEGVVKIVQVLYECKGNLNRIRLHGICRMTKHHLDAISSAMCKGNQQEDDQSLFYSH 756

Query: 636  WMSLPLNDNDDRPIDMDICPRCNNAGLVFDCTRENCRSMKYRWSVCRGCFFCIARCQECG 815
             +   LN ND+R ID+D+CP C N  LVFDCTR+ CR  K  W+ CRGCFFC+ARC+ CG
Sbjct: 757  RVHEVLNTNDERRIDVDVCPMCTNVRLVFDCTRDGCR-RKDSWAQCRGCFFCVARCETCG 815

Query: 816  GCIDFEELGE-ETICAHLLCIDCWLQLPKCSMCNRPYCKGHINFRG--SSPALFVCDQCG 986
            GCID EEL E E  C+  LC++CWL LPKCS CNRPYCK H N +   S    F C +C 
Sbjct: 816  GCIDLEELSETELACSDFLCMECWLPLPKCSTCNRPYCKRHENLKVDLSPSGQFTCHRC- 874

Query: 987  YDEFTTN 1007
              EF++N
Sbjct: 875  -VEFSSN 880


>ref|NP_001061846.1| Os08g0428100 [Oryza sativa Japonica Group]
           gi|113623815|dbj|BAF23760.1| Os08g0428100 [Oryza sativa
           Japonica Group]
          Length = 338

 Score =  290 bits (743), Expect = 3e-76
 Identities = 150/310 (48%), Positives = 192/310 (61%), Gaps = 31/310 (10%)
 Frame = +3

Query: 117 NASDPAPSPT------DPHAALFLVLGYLRLPDLLAFQSVCRLFREAIAGDRLLWMRITV 278
           +A+ P P P       +PHAAL L L YL L +LL+    CR  R+A+AGD LLW R+ V
Sbjct: 9   SAAPPPPPPLPASPGGEPHAALLLSLAYLPLRELLSCAGACRRLRDAVAGDPLLWRRVAV 68

Query: 279 E-PPLSGRLTDDALLQLTSRAGGTLKSLALLDCWKITDAGLLQVVDRNPTITE------- 434
             PPL+ RLTD+ALL LT RAGGTL+SL LL C +++DAGLL+VV+RNP ITE       
Sbjct: 69  AAPPLARRLTDEALLALTGRAGGTLRSLRLLGCTRVSDAGLLRVVERNPGITEILSMESS 128

Query: 435 ----------------LYIPGCTYLTADGVVSVVQRLSEXXXXXXXXXXXXXCNISRDHL 566
                           LY+P CT LTA+GVV +VQ L E             C +++ HL
Sbjct: 129 TLLKDTMISTRAKIYKLYMPRCTGLTAEGVVKIVQVLYECKGNLNRIRLHGICRMTKHHL 188

Query: 567 DSLNYYLGINDHPQCSKPSVYNHWMSLPLNDNDDRPIDMDICPRCNNAGLVFDCTRENCR 746
           D+++  +   +  +  +   Y+H +   LN ND+R ID+D+CP C N  LVFDCTR+ CR
Sbjct: 189 DAISSAMCKGNQQEDDQSLFYSHRVHEVLNTNDERRIDVDVCPMCTNVRLVFDCTRDGCR 248

Query: 747 SMKYRWSVCRGCFFCIARCQECGGCIDFEELGE-ETICAHLLCIDCWLQLPKCSMCNRPY 923
             K  W+ CRGCFFC+ARC+ CGGCID EEL E E  C+  LC++CWL LPKCS CNRPY
Sbjct: 249 -RKDSWAQCRGCFFCVARCETCGGCIDLEELSETELACSDFLCMECWLPLPKCSTCNRPY 307

Query: 924 CKGHINFRGS 953
           CK H N + S
Sbjct: 308 CKRHENLKDS 317


>gb|EEC83610.1| hypothetical protein OsI_29306 [Oryza sativa Indica Group]
          Length = 358

 Score =  282 bits (721), Expect = 1e-73
 Identities = 146/301 (48%), Positives = 186/301 (61%), Gaps = 25/301 (8%)
 Frame = +3

Query: 129 PAPSPTDPHAALFLVLGYLRLPDLLAFQSVCRLFREAIAGDRLLWMRITVE-PPLSGRLT 305
           PA    +PHAAL L L YL L +LL+    CR  R+A+AGD LLW R+ V  PPL+ RLT
Sbjct: 20  PASPGGEPHAALLLSLAYLPLRELLSCAGACRRLRDAVAGDPLLWRRVAVAAPPLARRLT 79

Query: 306 DDALLQLTSRAGGTLKSLALLDCWKITDAGLLQVVDRNPTITE----------------- 434
           D+ALL LT RAGGTL+SL LL C +++D GLL+VV+RN  ITE                 
Sbjct: 80  DEALLALTGRAGGTLRSLRLLGCTRVSDTGLLRVVERNLGITEILSMESSTLLKDTMIST 139

Query: 435 ------LYIPGCTYLTADGVVSVVQRLSEXXXXXXXXXXXXXCNISRDHLDSLNYYLGIN 596
                 LY+P CT LTA+GVV +VQ L E             C +++ HLD+++  +   
Sbjct: 140 RAKIYKLYMPRCTGLTAEGVVKIVQALYECKGNLNRIRLHGICRMTKHHLDAISSAMCKG 199

Query: 597 DHPQCSKPSVYNHWMSLPLNDNDDRPIDMDICPRCNNAGLVFDCTRENCRSMKYRWSVCR 776
           +  +  +   Y+H +   LN ND+R ID+D+CP C N  LVFDCTR+ CR    R + CR
Sbjct: 200 NQQKDDQSLFYSHRVHEVLNTNDERHIDVDVCPICTNVRLVFDCTRDGCRRKDSR-AQCR 258

Query: 777 GCFFCIARCQECGGCIDFEELGE-ETICAHLLCIDCWLQLPKCSMCNRPYCKGHINFRGS 953
           GCFFC+ARC+ CGGCID EEL E E  C+  LC++CWL LPKCS CNRPYCK H N + S
Sbjct: 259 GCFFCVARCETCGGCIDLEELSETELACSDFLCMECWLPLPKCSTCNRPYCKRHENLKAS 318

Query: 954 S 956
           S
Sbjct: 319 S 319


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