BLASTX nr result

ID: Dioscorea21_contig00012713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012713
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEB96141.1| E2F protein [Cocos nucifera]                           176   2e-42
gb|AEB96142.1| E2F protein [Cocos nucifera]                           137   1e-30
emb|CBI28269.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...   134   1e-29
ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   130   8e-29

>gb|AEB96141.1| E2F protein [Cocos nucifera]
          Length = 471

 Score =  176 bits (445), Expect = 2e-42
 Identities = 86/141 (60%), Positives = 101/141 (71%)
 Frame = -2

Query: 431 FEEKFEEMSAVETPRSVPPASNSASVEKSVAPMVTEDIRGNEAEEHAHDAQMMCTNGSAS 252
           +EEKFEEMS VETP  +PPASNS SVE S   +VT + RG E      D Q M ++ +AS
Sbjct: 329 YEEKFEEMSGVETPTRLPPASNSGSVENSTVEVVTGECRGKEMAIDVQDCQRMDSDPNAS 388

Query: 251 DDYNGGIMKIVPSDVDTDADYWLLSDAGVSITDMWKTAPEVPWDGMGRLQSEDFMNGSVS 72
            D+ GG+MKIVPSDVDTDADYWLLSDAGVSITDMWKTAPEV WD MGR   EDF+  + S
Sbjct: 389 HDFVGGMMKIVPSDVDTDADYWLLSDAGVSITDMWKTAPEVQWDAMGRFNPEDFIASNAS 448

Query: 71  TPRAGTSSSGVVEVPSCVQNT 9
           TPR  T  S V++ P+   +T
Sbjct: 449 TPRPETPPSSVIDAPASTNST 469


>gb|AEB96142.1| E2F protein [Cocos nucifera]
          Length = 451

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/98 (68%), Positives = 76/98 (77%)
 Frame = -2

Query: 431 FEEKFEEMSAVETPRSVPPASNSASVEKSVAPMVTEDIRGNEAEEHAHDAQMMCTNGSAS 252
           FEEKFEEMS VETP  +PP SNSA VE S   +VTE+ RG E      D+Q M ++ +AS
Sbjct: 328 FEEKFEEMSGVETPLRIPPTSNSAFVENSTVEVVTEESRGKEMAPSVQDSQRMSSDPNAS 387

Query: 251 DDYNGGIMKIVPSDVDTDADYWLLSDAGVSITDMWKTA 138
            D+ GG+MKIVPSDVDTDADYWLLSDAGVSITDMWKTA
Sbjct: 388 QDFVGGMMKIVPSDVDTDADYWLLSDAGVSITDMWKTA 425


>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  134 bits (336), Expect = 1e-29
 Identities = 72/135 (53%), Positives = 90/135 (66%)
 Frame = -2

Query: 431 FEEKFEEMSAVETPRSVPPASNSASVEKSVAPMVTEDIRGNEAEEHAHDAQMMCTNGSAS 252
           FEEKFEE++ +E P S P  S+S   E   A MVTE+ RG E E    DA  M ++ +AS
Sbjct: 307 FEEKFEEINGLEAPPSFP--SSSGYNEDPTAAMVTEESRGKEIEIQGQDAHRMSSDLNAS 364

Query: 251 DDYNGGIMKIVPSDVDTDADYWLLSDAGVSITDMWKTAPEVPWDGMGRLQSEDFMNGSVS 72
            D+  GIMKIVPSDVD+DADYWLLSDA VSITDMW+T P V W+ +  L ++D+   +VS
Sbjct: 365 QDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPGVEWNELDAL-NDDYAMANVS 423

Query: 71  TPRAGTSSSGVVEVP 27
           TP+  T  S   EVP
Sbjct: 424 TPQPQTPPSSAAEVP 438


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score =  134 bits (336), Expect = 1e-29
 Identities = 72/135 (53%), Positives = 90/135 (66%)
 Frame = -2

Query: 431 FEEKFEEMSAVETPRSVPPASNSASVEKSVAPMVTEDIRGNEAEEHAHDAQMMCTNGSAS 252
           FEEKFEE++ +E P S P  S+S   E   A MVTE+ RG E E    DA  M ++ +AS
Sbjct: 318 FEEKFEEINGLEAPPSFP--SSSGYNEDPTAAMVTEESRGKEIEIQGQDAHRMSSDLNAS 375

Query: 251 DDYNGGIMKIVPSDVDTDADYWLLSDAGVSITDMWKTAPEVPWDGMGRLQSEDFMNGSVS 72
            D+  GIMKIVPSDVD+DADYWLLSDA VSITDMW+T P V W+ +  L ++D+   +VS
Sbjct: 376 QDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPGVEWNELDAL-NDDYAMANVS 434

Query: 71  TPRAGTSSSGVVEVP 27
           TP+  T  S   EVP
Sbjct: 435 TPQPQTPPSSAAEVP 449


>ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
           [Cucumis sativus]
          Length = 462

 Score =  130 bits (328), Expect = 8e-29
 Identities = 68/126 (53%), Positives = 85/126 (67%)
 Frame = -2

Query: 431 FEEKFEEMSAVETPRSVPPASNSASVEKSVAPMVTEDIRGNEAEEHAHDAQMMCTNGSAS 252
           FE KFEE++A E P S+P  S+S   E     +VTED RG E E    D   MC++ +AS
Sbjct: 323 FEAKFEEINAAEVPPSLP--SSSGLNEAPTTTLVTEDTRGKEIETREQDVHRMCSDLNAS 380

Query: 251 DDYNGGIMKIVPSDVDTDADYWLLSDAGVSITDMWKTAPEVPWDGMGRLQSEDFMNGSVS 72
            D+ GGIMKIVPS VD+DADYWLLSDA VSITDMW+T P V W+ +G    ED+  G+VS
Sbjct: 381 QDFVGGIMKIVPSVVDSDADYWLLSDADVSITDMWRTEPSVEWNELGTFH-EDYSIGTVS 439

Query: 71  TPRAGT 54
           +P+  T
Sbjct: 440 SPQTQT 445


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