BLASTX nr result

ID: Dioscorea21_contig00012708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012708
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532066.1| PREDICTED: uncharacterized protein LOC100798...    65   6e-09
ref|XP_003551959.1| PREDICTED: uncharacterized protein LOC100790...    65   8e-09
ref|XP_004156043.1| PREDICTED: uncharacterized LOC101207727 [Cuc...    62   5e-08
ref|XP_004140202.1| PREDICTED: uncharacterized protein LOC101207...    62   5e-08
ref|XP_002298477.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_003532066.1| PREDICTED: uncharacterized protein LOC100798056 [Glycine max]
          Length = 74

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/72 (48%), Positives = 37/72 (51%)
 Frame = +3

Query: 33  MARDGCLTRIXXXXXXXXXXXXXXXXXXXTYEAIRFKVPGLLKIRHIGQKTXXXXXXXXX 212
           MARD CLTR+                   TYEAIR+KVPGLLKIRHIGQ T         
Sbjct: 1   MARDSCLTRVTAGAAMGGAVGGAVGAVYGTYEAIRYKVPGLLKIRHIGQTTLGSAAIFGL 60

Query: 213 XXXXXSLIHCGK 248
                SLIHCGK
Sbjct: 61  FLGAGSLIHCGK 72


>ref|XP_003551959.1| PREDICTED: uncharacterized protein LOC100790370 [Glycine max]
          Length = 83

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/77 (46%), Positives = 38/77 (49%)
 Frame = +3

Query: 18  SREENMARDGCLTRIXXXXXXXXXXXXXXXXXXXTYEAIRFKVPGLLKIRHIGQKTXXXX 197
           SR   MARD CL R+                   TYEAIR+KVPGLLKIRHIGQ T    
Sbjct: 5   SRRLPMARDSCLARVTAGAAMGGAVGGAVGAVYGTYEAIRYKVPGLLKIRHIGQTTLGSA 64

Query: 198 XXXXXXXXXXSLIHCGK 248
                     SLIHCGK
Sbjct: 65  AIFGLFLGAGSLIHCGK 81


>ref|XP_004156043.1| PREDICTED: uncharacterized LOC101207727 [Cucumis sativus]
          Length = 74

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/72 (47%), Positives = 36/72 (50%)
 Frame = +3

Query: 33  MARDGCLTRIXXXXXXXXXXXXXXXXXXXTYEAIRFKVPGLLKIRHIGQKTXXXXXXXXX 212
           MARD CL R+                   TYEAIRFKVPGLLKIR+IGQ T         
Sbjct: 1   MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGL 60

Query: 213 XXXXXSLIHCGK 248
                SLIHCGK
Sbjct: 61  FLGAGSLIHCGK 72


>ref|XP_004140202.1| PREDICTED: uncharacterized protein LOC101207727 [Cucumis sativus]
          Length = 74

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/72 (47%), Positives = 36/72 (50%)
 Frame = +3

Query: 33  MARDGCLTRIXXXXXXXXXXXXXXXXXXXTYEAIRFKVPGLLKIRHIGQKTXXXXXXXXX 212
           MARD CL R+                   TYEAIRFKVPGLLKIR+IGQ T         
Sbjct: 1   MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGKYCIFGL 60

Query: 213 XXXXXSLIHCGK 248
                SLIHCGK
Sbjct: 61  FLGAGSLIHCGK 72


>ref|XP_002298477.1| predicted protein [Populus trichocarpa] gi|222845735|gb|EEE83282.1|
           predicted protein [Populus trichocarpa]
          Length = 74

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/72 (45%), Positives = 36/72 (50%)
 Frame = +3

Query: 33  MARDGCLTRIXXXXXXXXXXXXXXXXXXXTYEAIRFKVPGLLKIRHIGQKTXXXXXXXXX 212
           MARD CL RI                   TYEA+R+KVPGLLKIR+IGQ T         
Sbjct: 1   MARDSCLARITAGVAVGGAIGGAVGAVYGTYEAVRYKVPGLLKIRYIGQTTLGSAAIFGL 60

Query: 213 XXXXXSLIHCGK 248
                SLIHCGK
Sbjct: 61  FLGAGSLIHCGK 72


Top