BLASTX nr result
ID: Dioscorea21_contig00012706
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00012706 (488 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN77684.1| hypothetical protein VITISV_040766 [Vitis vinifera] 61 1e-07 ref|XP_002283854.1| PREDICTED: transportin-3 [Vitis vinifera] gi... 60 2e-07 ref|XP_002511481.1| transportin, putative [Ricinus communis] gi|... 59 5e-07 ref|XP_002318009.1| predicted protein [Populus trichocarpa] gi|2... 58 9e-07 ref|XP_002321551.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 >emb|CAN77684.1| hypothetical protein VITISV_040766 [Vitis vinifera] Length = 798 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/45 (68%), Positives = 36/45 (80%) Frame = +2 Query: 5 AAGSDGSALRNSLEELSYVCRRNRTVQDIVQNALRPLDLNLNPVS 139 A G+D + L S+EELS VCRRNRTVQ+IVQ ALRP +LNL PVS Sbjct: 754 ATGADINTLTVSMEELSDVCRRNRTVQEIVQGALRPXELNLAPVS 798 >ref|XP_002283854.1| PREDICTED: transportin-3 [Vitis vinifera] gi|297733855|emb|CBI15102.3| unnamed protein product [Vitis vinifera] Length = 960 Score = 60.1 bits (144), Expect = 2e-07 Identities = 31/45 (68%), Positives = 36/45 (80%) Frame = +2 Query: 5 AAGSDGSALRNSLEELSYVCRRNRTVQDIVQNALRPLDLNLNPVS 139 A G+D + L S+EELS VCRRNRTVQ+IVQ ALRP +LNL PVS Sbjct: 916 ATGADINTLTVSMEELSDVCRRNRTVQEIVQGALRPHELNLAPVS 960 >ref|XP_002511481.1| transportin, putative [Ricinus communis] gi|223550596|gb|EEF52083.1| transportin, putative [Ricinus communis] Length = 967 Score = 58.5 bits (140), Expect = 5e-07 Identities = 31/45 (68%), Positives = 36/45 (80%) Frame = +2 Query: 5 AAGSDGSALRNSLEELSYVCRRNRTVQDIVQNALRPLDLNLNPVS 139 A+G D +AL +EELS VCRRNRTVQ+IVQ ALRPL+LNL VS Sbjct: 923 ASGIDVNALMAPVEELSDVCRRNRTVQEIVQGALRPLELNLVTVS 967 >ref|XP_002318009.1| predicted protein [Populus trichocarpa] gi|222858682|gb|EEE96229.1| predicted protein [Populus trichocarpa] Length = 554 Score = 57.8 bits (138), Expect = 9e-07 Identities = 30/45 (66%), Positives = 35/45 (77%) Frame = +2 Query: 5 AAGSDGSALRNSLEELSYVCRRNRTVQDIVQNALRPLDLNLNPVS 139 A+G D L ++EELS VCRRNRTVQ+IVQ ALRPL+LNL VS Sbjct: 510 ASGVDIKTLMGAVEELSDVCRRNRTVQEIVQGALRPLELNLVTVS 554 >ref|XP_002321551.1| predicted protein [Populus trichocarpa] gi|222868547|gb|EEF05678.1| predicted protein [Populus trichocarpa] Length = 379 Score = 56.2 bits (134), Expect = 3e-06 Identities = 28/41 (68%), Positives = 34/41 (82%) Frame = +2 Query: 5 AAGSDGSALRNSLEELSYVCRRNRTVQDIVQNALRPLDLNL 127 A+G D ++L +EELS VCRRNRTVQ+IVQ ALRPL+LNL Sbjct: 337 ASGIDVNSLMAPIEELSDVCRRNRTVQEIVQGALRPLELNL 377