BLASTX nr result

ID: Dioscorea21_contig00012706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012706
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77684.1| hypothetical protein VITISV_040766 [Vitis vinifera]    61   1e-07
ref|XP_002283854.1| PREDICTED: transportin-3 [Vitis vinifera] gi...    60   2e-07
ref|XP_002511481.1| transportin, putative [Ricinus communis] gi|...    59   5e-07
ref|XP_002318009.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002321551.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>emb|CAN77684.1| hypothetical protein VITISV_040766 [Vitis vinifera]
          Length = 798

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = +2

Query: 5   AAGSDGSALRNSLEELSYVCRRNRTVQDIVQNALRPLDLNLNPVS 139
           A G+D + L  S+EELS VCRRNRTVQ+IVQ ALRP +LNL PVS
Sbjct: 754 ATGADINTLTVSMEELSDVCRRNRTVQEIVQGALRPXELNLAPVS 798


>ref|XP_002283854.1| PREDICTED: transportin-3 [Vitis vinifera]
            gi|297733855|emb|CBI15102.3| unnamed protein product
            [Vitis vinifera]
          Length = 960

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = +2

Query: 5    AAGSDGSALRNSLEELSYVCRRNRTVQDIVQNALRPLDLNLNPVS 139
            A G+D + L  S+EELS VCRRNRTVQ+IVQ ALRP +LNL PVS
Sbjct: 916  ATGADINTLTVSMEELSDVCRRNRTVQEIVQGALRPHELNLAPVS 960


>ref|XP_002511481.1| transportin, putative [Ricinus communis] gi|223550596|gb|EEF52083.1|
            transportin, putative [Ricinus communis]
          Length = 967

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = +2

Query: 5    AAGSDGSALRNSLEELSYVCRRNRTVQDIVQNALRPLDLNLNPVS 139
            A+G D +AL   +EELS VCRRNRTVQ+IVQ ALRPL+LNL  VS
Sbjct: 923  ASGIDVNALMAPVEELSDVCRRNRTVQEIVQGALRPLELNLVTVS 967


>ref|XP_002318009.1| predicted protein [Populus trichocarpa] gi|222858682|gb|EEE96229.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +2

Query: 5   AAGSDGSALRNSLEELSYVCRRNRTVQDIVQNALRPLDLNLNPVS 139
           A+G D   L  ++EELS VCRRNRTVQ+IVQ ALRPL+LNL  VS
Sbjct: 510 ASGVDIKTLMGAVEELSDVCRRNRTVQEIVQGALRPLELNLVTVS 554


>ref|XP_002321551.1| predicted protein [Populus trichocarpa] gi|222868547|gb|EEF05678.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = +2

Query: 5   AAGSDGSALRNSLEELSYVCRRNRTVQDIVQNALRPLDLNL 127
           A+G D ++L   +EELS VCRRNRTVQ+IVQ ALRPL+LNL
Sbjct: 337 ASGIDVNSLMAPIEELSDVCRRNRTVQEIVQGALRPLELNL 377


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