BLASTX nr result

ID: Dioscorea21_contig00012698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012698
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269653.2| PREDICTED: disease resistance RPP8-like prot...   111   7e-23
emb|CAN70214.1| hypothetical protein VITISV_038742 [Vitis vinifera]   110   2e-22
emb|CBI37944.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002274414.2| PREDICTED: probable disease resistance RPP8-...   106   2e-21
ref|XP_002529494.1| conserved hypothetical protein [Ricinus comm...   106   2e-21

>ref|XP_002269653.2| PREDICTED: disease resistance RPP8-like protein 3-like [Vitis
            vinifera]
          Length = 856

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/143 (41%), Positives = 85/143 (59%), Gaps = 1/143 (0%)
 Frame = -1

Query: 427  EGLPDSNSMLAXXXXXXXXXTRLHEDPLALFGKLDNLQVLRLRYNAFVGGEMVCLEKGFP 248
            E LPD   +           + L +D   + GKL NLQ+L+L  N+F G E+ C   GFP
Sbjct: 714  EKLPDPQEIQPNLTKIILENSLLVQDIFVILGKLPNLQMLKLLINSFFGKEITCSASGFP 773

Query: 247  QLQVLELNSLFELEVWRIEDEAMPKLRELEIQRC-RLTMLPQGLQKVTTLQELKVIDMSH 71
            +L  LEL+ L  LE WR++D AMP LR L I  C +L  +P+G Q +T L+EL +++M  
Sbjct: 774  KLHGLELSELVNLEEWRVDDGAMPSLRHLIIDHCDQLKKIPEGFQYLTALRELFLLNMPD 833

Query: 70   DFCGRLTNNDGEDWEKIKHIPSV 2
            +F  R+    G+DW KI+HIPS+
Sbjct: 834  EFEARI---KGDDWYKIQHIPSI 853


>emb|CAN70214.1| hypothetical protein VITISV_038742 [Vitis vinifera]
          Length = 902

 Score =  110 bits (274), Expect = 2e-22
 Identities = 60/143 (41%), Positives = 85/143 (59%), Gaps = 1/143 (0%)
 Frame = -1

Query: 427  EGLPDSNSMLAXXXXXXXXXTRLHEDPLALFGKLDNLQVLRLRYNAFVGGEMVCLEKGFP 248
            E LPD   +           + L +D   + GKL NLQ+L+L  N+F G E+ C   GFP
Sbjct: 760  EKLPDPQEIQPNLTKIILEKSLLVQDIFVILGKLPNLQMLKLLINSFFGKEITCSASGFP 819

Query: 247  QLQVLELNSLFELEVWRIEDEAMPKLRELEIQRC-RLTMLPQGLQKVTTLQELKVIDMSH 71
            +L  LEL+ L  LE WR++D AMP LR L I  C +L  +P+G Q +T L+EL +++M  
Sbjct: 820  KLHGLELSELVNLEEWRVDDGAMPSLRHLVIDHCDQLKKIPEGFQYLTALRELFLLNMPD 879

Query: 70   DFCGRLTNNDGEDWEKIKHIPSV 2
            +F  R+    G+DW KI+HIPS+
Sbjct: 880  EFEIRI---KGDDWYKIQHIPSI 899


>emb|CBI37944.3| unnamed protein product [Vitis vinifera]
          Length = 787

 Score =  106 bits (265), Expect = 2e-21
 Identities = 62/141 (43%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
 Frame = -1

Query: 421  LPDSNSMLAXXXXXXXXXTRLHEDPLALFGKLDNLQVLRLRYNAFVGGEMVCLEKGFPQL 242
            LP+ NS            +RL EDP+   GKL +LQ LRL +  F G E+VCL + FP+L
Sbjct: 640  LPEYNSFPPNLIKLTLWGSRLVEDPMPTLGKLPHLQFLRLPHTYF-GKEIVCLTESFPRL 698

Query: 241  QVLELNSLFELEVWRIEDEAMPKLRELEIQRC-RLTMLPQGLQKVTTLQELKVIDMSHDF 65
            + L +++  +LE W+I D AMP L EL+I+RC +L  LP GL+ VTTL+EL++I+M + F
Sbjct: 699  KYLFISNFPKLEKWKIYDTAMPSLLELQIRRCEQLKKLPDGLRLVTTLRELEIIEMPNGF 758

Query: 64   CGRLTNNDGEDWEKIKHIPSV 2
              RL    GED+ K++ + S+
Sbjct: 759  LNRL-KVGGEDFYKVQQVHSI 778


>ref|XP_002274414.2| PREDICTED: probable disease resistance RPP8-like protein 2-like
            [Vitis vinifera]
          Length = 922

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/117 (47%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
 Frame = -1

Query: 361  LHEDPLALFGKLDNLQVLRLRYNAFVGGEMVCLEKGFPQLQVLELNSLFELEVWRIEDEA 182
            L EDP+     L +L+VL+L+++A++G EM+C   GFPQL  L+L+ L  +E WRIED A
Sbjct: 786  LMEDPMVKLEMLQSLRVLKLKHSAYLGKEMICSCGGFPQLHFLKLSFLNTVERWRIEDGA 845

Query: 181  MPKLRELEIQRC-RLTMLPQGLQKVTTLQELKVIDMSHDFCGRLTNNDGEDWEKIKH 14
            M +LR+LEI  C RL ++P+GLQ VTT+ +LK+  M  +F  ++    GE+W KI+H
Sbjct: 846  MGRLRQLEIIECKRLKIVPRGLQPVTTIHKLKLGYMPREFEMKVQERQGENWYKIEH 902


>ref|XP_002529494.1| conserved hypothetical protein [Ricinus communis]
            gi|223531052|gb|EEF32904.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1115

 Score =  106 bits (264), Expect = 2e-21
 Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
 Frame = -1

Query: 361  LHEDPLALFGKLDNLQVLRLRYNAFVGGEMVCLEKGFPQLQVLELNSLFELEVWRIEDEA 182
            L EDP+ +  +L NL  LRL   +F G +MVC  + FP+L+VL+L  L  LE W IE+ A
Sbjct: 992  LVEDPMQMLAQLPNLINLRLFCGSFTGQKMVCTSRAFPKLRVLKLWELDPLEEWNIEEGA 1051

Query: 181  MPKLRELEIQRCR-LTMLPQGLQKVTTLQELKVIDMSHDFCGRLTNNDGEDWEKIKHIPS 5
            MP L+ LEI+ CR L MLP GLQ V TL +LK+ +M      R+ +N+GEDW+K+ HI +
Sbjct: 1052 MPGLKCLEIRSCRNLGMLPDGLQHVKTLSKLKLTNMPM-LSARIKDNEGEDWDKVAHILN 1110

Query: 4    V 2
            +
Sbjct: 1111 I 1111


Top