BLASTX nr result

ID: Dioscorea21_contig00012696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012696
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542594.1| PREDICTED: uncharacterized protein LOC100787...    74   6e-11
ref|XP_002458799.1| hypothetical protein SORBIDRAFT_03g040460 [S...    70   5e-10
ref|XP_002884775.1| tata-associated factor II 58 [Arabidopsis ly...    66   1e-08
ref|XP_004156257.1| PREDICTED: uncharacterized protein LOC101226...    65   2e-08
ref|XP_004143314.1| PREDICTED: uncharacterized protein LOC101211...    65   2e-08

>ref|XP_003542594.1| PREDICTED: uncharacterized protein LOC100787779 [Glycine max]
          Length = 507

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 65/179 (36%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
 Frame = +3

Query: 273 SRPQGPFPHFSSHIPXXXXXXXXXXPIQRGGMAIGVPAHHPRPHQSGQTFFNPSTTFSQP 452
           S+PQ  FPHFSS  P          P  RGGMAIGVPAHH  P          S++F Q 
Sbjct: 94  SQPQ--FPHFSSPSPPSSAPSAAPPP--RGGMAIGVPAHHQSPSPPF------SSSFGQH 143

Query: 453 YSGLHR-----PDQTSLSS-AQARQPAPXXXXXXXXXXXXXXXXXRLSGVAGQHPRLGQP 614
           + GL R      + TS SS +QAR P                   R SG+     R  Q 
Sbjct: 144 FGGLGRTAVNVAESTSNSSTSQARTPV--------QGMGMLGSQMRPSGIGSHQQRSVQS 195

Query: 615 TARSASPA-TSQSLSAQKFQTHGLARPPMASSNA--PTSGAQTPQTLDQQWMA--AQGK 776
           + R  + A  +Q   +Q FQ HGL RP    S A    S +Q+ Q+L+Q W++  +QGK
Sbjct: 196 SLRPPTSAPNNQPAGSQSFQGHGLMRPSSVGSTATPSPSSSQSMQSLNQPWLSSGSQGK 254


>ref|XP_002458799.1| hypothetical protein SORBIDRAFT_03g040460 [Sorghum bicolor]
           gi|241930774|gb|EES03919.1| hypothetical protein
           SORBIDRAFT_03g040460 [Sorghum bicolor]
          Length = 498

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
 Frame = +3

Query: 348 PIQRGGMAIGVPAHHPRPHQSGQTFFNPSTTFSQPYSGLHR-PDQTSLSSAQARQPAPXX 524
           P+ RGG+ +GVPA  P    +G T F P    +  +  +HR PDQ   SS+Q RQP+P  
Sbjct: 121 PVPRGGVVLGVPAPRPAQTPAGYTGFVPPPPLAHQFGLMHRGPDQPPPSSSQFRQPSP-G 179

Query: 525 XXXXXXXXXXXXXXXRLSGVAG-QHPRLGQPTARSASPATSQSLSAQKFQTHGLARPPMA 701
                          R   ++G Q PR G P++ +  P+ SQ   +Q+  +  L RP   
Sbjct: 180 IQNIGMAGSINTSQMRPGAISGPQQPRPGLPSSTTTIPSGSQMPGSQRAPSQSLMRPMTV 239

Query: 702 SSNAP-TSGAQTPQTLDQQWMAAQGKQL 782
           SS +P  +  QTPQ+    +   Q  Q+
Sbjct: 240 SSPSPLPASQQTPQSSSSTFRPQQRPQI 267


>ref|XP_002884775.1| tata-associated factor II 58 [Arabidopsis lyrata subsp. lyrata]
           gi|297330615|gb|EFH61034.1| tata-associated factor II 58
           [Arabidopsis lyrata subsp. lyrata]
          Length = 541

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 58/161 (36%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
 Frame = +3

Query: 354 QRGGMAIGVPAH---HPRPHQSGQTFFNPSTTFSQPYSGLHR-----PDQTSLSSAQARQ 509
           QRGGMAIGVPA     P P  S  T      +F Q Y GL R      + TS SSA   +
Sbjct: 137 QRGGMAIGVPASPIPSPSPTPSQHTPSAFPGSFGQQYGGLGRGTVGMSEATSNSSAPQVR 196

Query: 510 PAPXXXXXXXXXXXXXXXXXRLSGVAGQHPRLGQPTARSASPATSQSLSAQKFQTHGLAR 689
                               R SG+A    R  Q + R AS  ++QS  AQ FQ H L R
Sbjct: 197 MMQGTQGIGMMGTLGSGSQMRPSGMAQHQQRPTQSSLRPASSPSTQSPVAQNFQGHSLMR 256

Query: 690 P-PMASSNAPTSGA--QTPQTLDQQWMAA--QGKQLQASPS 797
           P P+ S +  ++GA  Q+ Q ++Q W+++  QGK     PS
Sbjct: 257 PSPIGSPSVQSTGASQQSLQAINQPWLSSTPQGKPPLPPPS 297


>ref|XP_004156257.1| PREDICTED: uncharacterized protein LOC101226357 [Cucumis sativus]
          Length = 511

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 54/187 (28%), Positives = 77/187 (41%), Gaps = 10/187 (5%)
 Frame = +3

Query: 267 ATSRPQGPFPHFSSHIPXXXXXXXXXXPI------QRGGMAIGVPAHHPRPHQSGQTFFN 428
           AT +P   F HFSS  P          P+      QR G+AIGVPAH P P      F  
Sbjct: 90  ATWQPPSHFSHFSSPSPSASSSVPSPRPVSASSPAQRSGVAIGVPAHQPTPSPQPAPF-- 147

Query: 429 PSTTFSQPYSGLHRPDQTSLSSAQARQPAPXXXXXXXXXXXXXXXXXRLSGVAGQHPRLG 608
            S ++ Q + GL R   +    A    P+                   L         L 
Sbjct: 148 -SASYGQHFGGLGRGGVSISDGASNSNPS-----QVRPPMQGMQGLGMLGSSGSSSQMLH 201

Query: 609 QPTARSASPATSQSLSAQKFQTHGLARPPMASSNAPT--SGAQTPQTLDQQWM--AAQGK 776
           +P   S  P ++ + ++Q FQ HGL R P  SS + +  + +Q  Q  +Q W+  ++QGK
Sbjct: 202 RPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLPNTSQGMQPTNQPWLPSSSQGK 261

Query: 777 QLQASPS 797
               +PS
Sbjct: 262 PPLPTPS 268


>ref|XP_004143314.1| PREDICTED: uncharacterized protein LOC101211513 [Cucumis sativus]
          Length = 511

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 54/187 (28%), Positives = 77/187 (41%), Gaps = 10/187 (5%)
 Frame = +3

Query: 267 ATSRPQGPFPHFSSHIPXXXXXXXXXXPI------QRGGMAIGVPAHHPRPHQSGQTFFN 428
           AT +P   F HFSS  P          P+      QR G+AIGVPAH P P      F  
Sbjct: 90  ATWQPPSHFSHFSSPSPSASSSVPSPRPVSASSPAQRSGVAIGVPAHQPTPSPQPAPF-- 147

Query: 429 PSTTFSQPYSGLHRPDQTSLSSAQARQPAPXXXXXXXXXXXXXXXXXRLSGVAGQHPRLG 608
            S ++ Q + GL R   +    A    P+                   L         L 
Sbjct: 148 -SASYGQHFGGLGRGGVSISDGASNSNPS-----QVRPPMQGMQGLGMLGSSGSSSQMLH 201

Query: 609 QPTARSASPATSQSLSAQKFQTHGLARPPMASSNAPT--SGAQTPQTLDQQWM--AAQGK 776
           +P   S  P ++ + ++Q FQ HGL R P  SS + +  + +Q  Q  +Q W+  ++QGK
Sbjct: 202 RPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLPNTSQGMQPTNQPWLPSSSQGK 261

Query: 777 QLQASPS 797
               +PS
Sbjct: 262 PPLPTPS 268