BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012689
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN10530.1| Lhca5 protein [Gentiana lutea]                         220   1e-55
ref|XP_002454598.1| hypothetical protein SORBIDRAFT_04g034130 [S...   218   4e-55
ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4...   217   1e-54
ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Po...   216   2e-54
ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4...   215   4e-54

>gb|ABN10530.1| Lhca5 protein [Gentiana lutea]
          Length = 272

 Score =  220 bits (561), Expect = 1e-55
 Identities = 105/145 (72%), Positives = 118/145 (81%)
 Frame = +3

Query: 126 SIPSSAKPTFPPFSSATITGSRLITRAHRPTWLPGLDPPSHLDGKLVGDFGFDPLGLGED 305
           S+P+ ++  F        T   ++    RPTWLPGLDPP +LDG L GDFGFDPLGLGED
Sbjct: 39  SLPAKSRGIFHSHGRRLCT---VVRAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLGED 95

Query: 306 PESLRWYVQAELVHCRFAMAGVAGILFTDLLRVTGISKLPVWYEAGAVKFEFANTTTLFI 485
           PESL+WYVQAELVH RFAMAGVAGILFTDLLR TG+S LPVWYEAGA KF+FANTTTLFI
Sbjct: 96  PESLKWYVQAELVHSRFAMAGVAGILFTDLLRTTGLSNLPVWYEAGATKFQFANTTTLFI 155

Query: 486 VQLFLMGFVETKRYMDYKNPGSQAQ 560
           VQ+ LMGFVETKRYMD+KNPGSQ +
Sbjct: 156 VQMLLMGFVETKRYMDFKNPGSQGE 180


>ref|XP_002454598.1| hypothetical protein SORBIDRAFT_04g034130 [Sorghum bicolor]
           gi|241934429|gb|EES07574.1| hypothetical protein
           SORBIDRAFT_04g034130 [Sorghum bicolor]
          Length = 266

 Score =  218 bits (556), Expect = 4e-55
 Identities = 102/118 (86%), Positives = 107/118 (90%)
 Frame = +3

Query: 210 RPTWLPGLDPPSHLDGKLVGDFGFDPLGLGEDPESLRWYVQAELVHCRFAMAGVAGILFT 389
           RPTWLPGLDPP HLDG L GDFGFDPLGLGEDP SL+WYVQAELVHCRFAMAGVAGILFT
Sbjct: 59  RPTWLPGLDPPPHLDGTLPGDFGFDPLGLGEDPASLKWYVQAELVHCRFAMAGVAGILFT 118

Query: 390 DLLRVTGISKLPVWYEAGAVKFEFANTTTLFIVQLFLMGFVETKRYMDYKNPGSQAQE 563
           DLLRV+G S LPVW+EAGA KFEFANTT LF VQL LMGF ETKRYMD+KNPGSQA+E
Sbjct: 119 DLLRVSGNSDLPVWFEAGAAKFEFANTTALFFVQLLLMGFAETKRYMDFKNPGSQAEE 176


>ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
           vinifera] gi|302142320|emb|CBI19523.3| unnamed protein
           product [Vitis vinifera]
          Length = 264

 Score =  217 bits (552), Expect = 1e-54
 Identities = 107/141 (75%), Positives = 117/141 (82%)
 Frame = +3

Query: 141 AKPTFPPFSSATITGSRLITRAHRPTWLPGLDPPSHLDGKLVGDFGFDPLGLGEDPESLR 320
           A+P    FS  T+  ++      RPTWLPGLDPP +L+G L GDFGFDPLGLGEDPE+LR
Sbjct: 38  ARPGPSRFSHGTVVQAQ-----QRPTWLPGLDPPPYLNGTLAGDFGFDPLGLGEDPENLR 92

Query: 321 WYVQAELVHCRFAMAGVAGILFTDLLRVTGISKLPVWYEAGAVKFEFANTTTLFIVQLFL 500
           WYVQAELVH RFAMAGVAGIL TDLLRVTGIS LPVWYEAGAVKFEFA+T  LFIVQL L
Sbjct: 93  WYVQAELVHARFAMAGVAGILVTDLLRVTGISNLPVWYEAGAVKFEFASTEALFIVQLIL 152

Query: 501 MGFVETKRYMDYKNPGSQAQE 563
           MGFVETKRYMD+ NPGSQA+E
Sbjct: 153 MGFVETKRYMDFTNPGSQAKE 173


>ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
           gi|222835451|gb|EEE73886.1| light-harvesting complex I
           protein Lhca5 [Populus trichocarpa]
          Length = 266

 Score =  216 bits (550), Expect = 2e-54
 Identities = 105/142 (73%), Positives = 118/142 (83%), Gaps = 1/142 (0%)
 Frame = +3

Query: 141 AKPTFPPFSSATITGSRLITRAH-RPTWLPGLDPPSHLDGKLVGDFGFDPLGLGEDPESL 317
           A  TF P   ++   + ++  A  RPTWLPGLDPP +LDG L GDFGFDPLGLGEDP+SL
Sbjct: 33  AAETFLPAKPSSTRCTPVVVHAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPQSL 92

Query: 318 RWYVQAELVHCRFAMAGVAGILFTDLLRVTGISKLPVWYEAGAVKFEFANTTTLFIVQLF 497
           +WYVQAELVH RFAMAGVAGILFTDLLRVTGI KLPVWYEAGAVKFEFA+T TL +VQL 
Sbjct: 93  KWYVQAELVHARFAMAGVAGILFTDLLRVTGIRKLPVWYEAGAVKFEFASTRTLIVVQLL 152

Query: 498 LMGFVETKRYMDYKNPGSQAQE 563
           LMGF ETKRYMD+ +PGSQA+E
Sbjct: 153 LMGFAETKRYMDFVSPGSQAKE 174


>ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
           [Cucumis sativus] gi|449522610|ref|XP_004168319.1|
           PREDICTED: chlorophyll a-b binding protein 4,
           chloroplastic-like [Cucumis sativus]
          Length = 259

 Score =  215 bits (547), Expect = 4e-54
 Identities = 99/119 (83%), Positives = 108/119 (90%)
 Frame = +3

Query: 207 HRPTWLPGLDPPSHLDGKLVGDFGFDPLGLGEDPESLRWYVQAELVHCRFAMAGVAGILF 386
           HR TWLPGLDPP HLDG L GDFGFDPLGLGEDP+SL+WYVQAELVHCRFAM GV+G+L 
Sbjct: 49  HRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLL 108

Query: 387 TDLLRVTGISKLPVWYEAGAVKFEFANTTTLFIVQLFLMGFVETKRYMDYKNPGSQAQE 563
           TDLLRVTGIS+LPVWY AGAV++ FAN  TLFIVQL LMGFVETKRYMD+K+PGSQAQE
Sbjct: 109 TDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQE 167