BLASTX nr result

ID: Dioscorea21_contig00012688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012688
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW73581.1| chlorophyll a-b binding protein 4 [Zea mays]           140   8e-32
ref|NP_001148187.1| LOC100281795 [Zea mays] gi|195616580|gb|ACG3...   140   8e-32
gb|ACF86226.1| unknown [Zea mays]                                     140   8e-32
ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4...   139   2e-31
ref|XP_002454598.1| hypothetical protein SORBIDRAFT_04g034130 [S...   139   2e-31

>gb|AFW73581.1| chlorophyll a-b binding protein 4 [Zea mays]
          Length = 315

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/79 (83%), Positives = 72/79 (91%)
 Frame = -1

Query: 238 HCRFAMAGVAGILFTDLLRVTGISKLPVWYEAGAVKFEFANTTTLFIVQLFLMGFVETKR 59
           HCRFAMAGVAGILFTDLLRV+G S LPVW+EAGA KF+FANTT LF VQLFLMGF ETKR
Sbjct: 153 HCRFAMAGVAGILFTDLLRVSGNSDLPVWFEAGAAKFDFANTTALFFVQLFLMGFAETKR 212

Query: 58  YMDYKSPGSQAQEGTFFGL 2
           YMD+K+PGSQA+EGTF GL
Sbjct: 213 YMDFKNPGSQAEEGTFIGL 231


>ref|NP_001148187.1| LOC100281795 [Zea mays] gi|195616580|gb|ACG30120.1| chlorophyll a-b
           binding protein 4 [Zea mays]
          Length = 269

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/79 (83%), Positives = 72/79 (91%)
 Frame = -1

Query: 238 HCRFAMAGVAGILFTDLLRVTGISKLPVWYEAGAVKFEFANTTTLFIVQLFLMGFVETKR 59
           HCRFAMAGVAGILFTDLLRV+G S LPVW+EAGA KF+FANTT LF VQLFLMGF ETKR
Sbjct: 107 HCRFAMAGVAGILFTDLLRVSGNSDLPVWFEAGAAKFDFANTTALFFVQLFLMGFAETKR 166

Query: 58  YMDYKSPGSQAQEGTFFGL 2
           YMD+K+PGSQA+EGTF GL
Sbjct: 167 YMDFKNPGSQAEEGTFIGL 185


>gb|ACF86226.1| unknown [Zea mays]
          Length = 269

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/79 (83%), Positives = 72/79 (91%)
 Frame = -1

Query: 238 HCRFAMAGVAGILFTDLLRVTGISKLPVWYEAGAVKFEFANTTTLFIVQLFLMGFVETKR 59
           HCRFAMAGVAGILFTDLLRV+G S LPVW+EAGA KF+FANTT LF VQLFLMGF ETKR
Sbjct: 107 HCRFAMAGVAGILFTDLLRVSGNSDLPVWFEAGAAKFDFANTTALFFVQLFLMGFAETKR 166

Query: 58  YMDYKSPGSQAQEGTFFGL 2
           YMD+K+PGSQA+EGTF GL
Sbjct: 167 YMDFKNPGSQAEEGTFIGL 185


>ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
           [Cucumis sativus] gi|449522610|ref|XP_004168319.1|
           PREDICTED: chlorophyll a-b binding protein 4,
           chloroplastic-like [Cucumis sativus]
          Length = 259

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/79 (83%), Positives = 72/79 (91%)
 Frame = -1

Query: 238 HCRFAMAGVAGILFTDLLRVTGISKLPVWYEAGAVKFEFANTTTLFIVQLFLMGFVETKR 59
           HCRFAM GV+G+L TDLLRVTGIS+LPVWY AGAV++ FAN  TLFIVQL LMGFVETKR
Sbjct: 95  HCRFAMLGVSGVLLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKR 154

Query: 58  YMDYKSPGSQAQEGTFFGL 2
           YMD+KSPGSQAQEGTFFGL
Sbjct: 155 YMDFKSPGSQAQEGTFFGL 173


>ref|XP_002454598.1| hypothetical protein SORBIDRAFT_04g034130 [Sorghum bicolor]
           gi|241934429|gb|EES07574.1| hypothetical protein
           SORBIDRAFT_04g034130 [Sorghum bicolor]
          Length = 266

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/79 (83%), Positives = 71/79 (89%)
 Frame = -1

Query: 238 HCRFAMAGVAGILFTDLLRVTGISKLPVWYEAGAVKFEFANTTTLFIVQLFLMGFVETKR 59
           HCRFAMAGVAGILFTDLLRV+G S LPVW+EAGA KFEFANTT LF VQL LMGF ETKR
Sbjct: 104 HCRFAMAGVAGILFTDLLRVSGNSDLPVWFEAGAAKFEFANTTALFFVQLLLMGFAETKR 163

Query: 58  YMDYKSPGSQAQEGTFFGL 2
           YMD+K+PGSQA+EGTF GL
Sbjct: 164 YMDFKNPGSQAEEGTFIGL 182


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