BLASTX nr result

ID: Dioscorea21_contig00012687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012687
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4...    84   2e-22
dbj|BAJ98426.1| predicted protein [Hordeum vulgare subsp. vulgar...    79   2e-21
gb|AFK47516.1| unknown [Lotus japonicus]                               79   3e-21
gb|AFK43193.1| unknown [Lotus japonicus]                               79   3e-21
ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7...    80   5e-21

>ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
           [Cucumis sativus] gi|449522610|ref|XP_004168319.1|
           PREDICTED: chlorophyll a-b binding protein 4,
           chloroplastic-like [Cucumis sativus]
          Length = 259

 Score = 84.0 bits (206), Expect(2) = 2e-22
 Identities = 38/47 (80%), Positives = 43/47 (91%)
 Frame = -3

Query: 264 KNGRLAMVAMVGFIVQAYVTHAGPIDNLITHLSNPWNKTIIQTLTAS 124
           KNGRLAMVAM+G  VQAYVTH GPIDNL+ HLSNPW+KTIIQTL++S
Sbjct: 211 KNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSS 257



 Score = 47.0 bits (110), Expect(2) = 2e-22
 Identities = 26/50 (52%), Positives = 30/50 (60%)
 Frame = -1

Query: 467 EGTFFGLEASXXXXXXXXXXXXXXXXXXLAKDIQNATELKLKEIKNGRLA 318
           EGTFFGLEA+                  +AKDI+NA + KLKEIKNGRLA
Sbjct: 167 EGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLA 216


>dbj|BAJ98426.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326509469|dbj|BAJ91651.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326509647|dbj|BAJ87039.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 257

 Score = 79.0 bits (193), Expect(2) = 2e-21
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = -3

Query: 264 KNGRLAMVAMVGFIVQAYVTHAGPIDNLITHLSNPWNKTIIQTLTAS 124
           KNGRLAMVAM+GFIVQA VTHAGPIDNL+THLS+P+NK II  LT S
Sbjct: 211 KNGRLAMVAMLGFIVQASVTHAGPIDNLLTHLSDPFNKNIIHALTLS 257



 Score = 48.5 bits (114), Expect(2) = 2e-21
 Identities = 27/50 (54%), Positives = 30/50 (60%)
 Frame = -1

Query: 467 EGTFFGLEASXXXXXXXXXXXXXXXXXXLAKDIQNATELKLKEIKNGRLA 318
           EGTF G+EAS                  LAKDI+NA E+KLKEIKNGRLA
Sbjct: 167 EGTFLGIEASLEGLQPGYPGGPLFNPMGLAKDIENANEVKLKEIKNGRLA 216


>gb|AFK47516.1| unknown [Lotus japonicus]
          Length = 266

 Score = 78.6 bits (192), Expect(2) = 3e-21
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = -3

Query: 264 KNGRLAMVAMVGFIVQAYVTHAGPIDNLITHLSNPWNKTIIQTLTASYS 118
           KNGRLAMVA++G  VQA VTH GPIDNL+ HLSNPW+KT+IQTL +S S
Sbjct: 218 KNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTVIQTLASSGS 266



 Score = 48.1 bits (113), Expect(2) = 3e-21
 Identities = 28/50 (56%), Positives = 30/50 (60%)
 Frame = -1

Query: 467 EGTFFGLEASXXXXXXXXXXXXXXXXXXLAKDIQNATELKLKEIKNGRLA 318
           EG+FFGLEAS                  LAKDI+NA E KLKEIKNGRLA
Sbjct: 174 EGSFFGLEASFEGLEPGYPGGPLLNPLGLAKDIKNARESKLKEIKNGRLA 223


>gb|AFK43193.1| unknown [Lotus japonicus]
          Length = 213

 Score = 78.6 bits (192), Expect(2) = 3e-21
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = -3

Query: 264 KNGRLAMVAMVGFIVQAYVTHAGPIDNLITHLSNPWNKTIIQTLTASYS 118
           KNGRLAMVA++G  VQA VTH GPIDNL+ HLSNPW+KT+IQTL +S S
Sbjct: 165 KNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTVIQTLASSGS 213



 Score = 48.1 bits (113), Expect(2) = 3e-21
 Identities = 28/50 (56%), Positives = 30/50 (60%)
 Frame = -1

Query: 467 EGTFFGLEASXXXXXXXXXXXXXXXXXXLAKDIQNATELKLKEIKNGRLA 318
           EG+FFGLEAS                  LAKDI+NA E KLKEIKNGRLA
Sbjct: 121 EGSFFGLEASFEGLEPGYPGGPLLNPLGLAKDIKNARESKLKEIKNGRLA 170


>ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
           [Glycine max]
          Length = 263

 Score = 79.7 bits (195), Expect(2) = 5e-21
 Identities = 38/49 (77%), Positives = 41/49 (83%)
 Frame = -3

Query: 264 KNGRLAMVAMVGFIVQAYVTHAGPIDNLITHLSNPWNKTIIQTLTASYS 118
           KNGRLAMVAM+G  VQA VTH GPIDNL+ HLSNPW+KTIIQTL  S S
Sbjct: 215 KNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLANSSS 263



 Score = 46.2 bits (108), Expect(2) = 5e-21
 Identities = 27/50 (54%), Positives = 29/50 (58%)
 Frame = -1

Query: 467 EGTFFGLEASXXXXXXXXXXXXXXXXXXLAKDIQNATELKLKEIKNGRLA 318
           EG+FFGLEAS                  LAKDI NA + KLKEIKNGRLA
Sbjct: 171 EGSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLA 220


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