BLASTX nr result

ID: Dioscorea21_contig00012686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012686
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278083.1| PREDICTED: probable spermidine synthase-like...   360   3e-97
ref|XP_002322191.1| predicted protein [Populus trichocarpa] gi|2...   358   2e-96
ref|XP_004152566.1| PREDICTED: uncharacterized protein LOC101205...   351   2e-94
ref|XP_004172274.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   344   3e-92
ref|XP_002866534.1| hypothetical protein ARALYDRAFT_496492 [Arab...   344   3e-92

>ref|XP_002278083.1| PREDICTED: probable spermidine synthase-like [Vitis vinifera]
          Length = 334

 Score =  360 bits (925), Expect = 3e-97
 Identities = 180/286 (62%), Positives = 210/286 (73%)
 Frame = +2

Query: 74  PLATKSKQSKQEEYNNDEEDGGIPSNEVKTLVKFKSNHNYIRVLQVSRRADHPLAGSRLL 253
           P+  K++ +    +    +D GIP + VK LVKFKS HNYIRVL VSR+ADHP AGSRLL
Sbjct: 49  PITAKAQHTHLSTHQTRTQDDGIPVDLVKILVKFKSRHNYIRVLDVSRKADHPFAGSRLL 108

Query: 254 LLDSPGNIHSISFLFKSLTATYFDVFATFPPILPSGPIAILGFGAGTAARLILHLYPESQ 433
           LLD PGNIHSISFL KS T TYFDV AT P ILP GP+ ILGFGAG+AARLIL  YP+  
Sbjct: 109 LLDGPGNIHSISFLLKSFTDTYFDVLATLPAILPPGPLGILGFGAGSAARLILETYPQVV 168

Query: 434 IHGWELDPSVISVGREFFGLEKLEKQNKGKLFIYIGDALEAEINDGFSGILVDLFAKGSL 613
           +HGWELDPSVI VGRE+FGL KLEK++  +LFIYIG+AL A + +GFSGILVDLF KGSL
Sbjct: 169 VHGWELDPSVIEVGREYFGLSKLEKEHPHRLFIYIGNALNASVRNGFSGILVDLFCKGSL 228

Query: 614 IPELQQAETWXXXXXXXXXXXXIMVNCGGSCVEAEDPEREGNAVMVETLKAMREVFAEKV 793
           IPELQ   TW            IMVN GGSCVEAED  R+G  VM E+LKAM +VF ++V
Sbjct: 229 IPELQDPGTWEKLRKRLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEESLKAMHKVFGDQV 288

Query: 794 FVLKLKHWKEDSCVAFTGPSPNMGFWKQALPLGLNSYVDMWAPLSS 931
           FVL L + KEDS +A TG  P++  WK+ALP  L  YVDMW P+SS
Sbjct: 289 FVLNLGNRKEDSSIALTGELPDLDEWKKALPRSLRYYVDMWTPVSS 334


>ref|XP_002322191.1| predicted protein [Populus trichocarpa] gi|222869187|gb|EEF06318.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  358 bits (919), Expect = 2e-96
 Identities = 174/265 (65%), Positives = 205/265 (77%)
 Frame = +2

Query: 128 EDGGIPSNEVKTLVKFKSNHNYIRVLQVSRRADHPLAGSRLLLLDSPGNIHSISFLFKSL 307
           ++ GIP  +VK + KFKS HNYIRVL++SR+ADHP AGSRLLLLD+PGNIHSISFLFKSL
Sbjct: 5   QEDGIPIEDVKIIAKFKSRHNYIRVLEISRKADHPFAGSRLLLLDAPGNIHSISFLFKSL 64

Query: 308 TATYFDVFATFPPILPSGPIAILGFGAGTAARLILHLYPESQIHGWELDPSVISVGREFF 487
           T TYFDVFA  PPI+P GPIAILGFGAG+AARL+L LYP   +HGWELD SVI VGREFF
Sbjct: 65  TNTYFDVFAALPPIIPPGPIAILGFGAGSAARLLLELYPGVVVHGWELDSSVIDVGREFF 124

Query: 488 GLEKLEKQNKGKLFIYIGDALEAEINDGFSGILVDLFAKGSLIPELQQAETWXXXXXXXX 667
           GL+KLEKQ   +LFIY+G+AL A++ DGFSGILVDLF KGSLIPELQ   TW        
Sbjct: 125 GLKKLEKQYPDRLFIYVGNALSAKVKDGFSGILVDLFCKGSLIPELQDPNTWEKLRKSLR 184

Query: 668 XXXXIMVNCGGSCVEAEDPEREGNAVMVETLKAMREVFAEKVFVLKLKHWKEDSCVAFTG 847
               IMVN GGSCVEAED  R+G  VM +TLKAM +VF +++FVL L + K+DS +A TG
Sbjct: 185 KGGRIMVNVGGSCVEAEDKRRDGKVVMEDTLKAMHQVFGDRLFVLNLGNRKDDSSLALTG 244

Query: 848 PSPNMGFWKQALPLGLNSYVDMWAP 922
             P++  WK+ LP  L+ YVDMW P
Sbjct: 245 KLPDLDAWKKVLPRSLSCYVDMWRP 269


>ref|XP_004152566.1| PREDICTED: uncharacterized protein LOC101205232 [Cucumis sativus]
          Length = 331

 Score =  351 bits (901), Expect = 2e-94
 Identities = 172/274 (62%), Positives = 210/274 (76%)
 Frame = +2

Query: 95  QSKQEEYNNDEEDGGIPSNEVKTLVKFKSNHNYIRVLQVSRRADHPLAGSRLLLLDSPGN 274
           Q++        +D GIPS++VK L KFKS HN+IRVL+VSRRA+HPLAGSRLLLLD+PGN
Sbjct: 52  QTQSSNPKKRTQDDGIPSDDVKILAKFKSRHNFIRVLEVSRRAEHPLAGSRLLLLDAPGN 111

Query: 275 IHSISFLFKSLTATYFDVFATFPPILPSGPIAILGFGAGTAARLILHLYPESQIHGWELD 454
           IHSISFLFKSLT TYFDVFAT PPILPSGPI ILGFGAG+AAR IL LYPE  +HGWELD
Sbjct: 112 IHSISFLFKSLTNTYFDVFATLPPILPSGPIGILGFGAGSAARSILKLYPEVVVHGWELD 171

Query: 455 PSVISVGREFFGLEKLEKQNKGKLFIYIGDALEAEINDGFSGILVDLFAKGSLIPELQQA 634
           PSV++VGREFFG+ KLEK+   +LFIYIG+AL A +  GF+GILVDLF++GSLIPEL+  
Sbjct: 172 PSVVAVGREFFGVSKLEKKYPDRLFIYIGNALNANVTGGFAGILVDLFSEGSLIPELEDP 231

Query: 635 ETWXXXXXXXXXXXXIMVNCGGSCVEAEDPEREGNAVMVETLKAMREVFAEKVFVLKLKH 814
            TW            +MVN GGSCVEAED  R+G  VM +TLKAM +V+ +K++VL+L +
Sbjct: 232 NTWRMLERCLMKGGRVMVNVGGSCVEAEDIRRDGKVVMEQTLKAMHQVYGKKLWVLRLGN 291

Query: 815 WKEDSCVAFTGPSPNMGFWKQALPLGLNSYVDMW 916
            ++DS +A TG  P++  WK+ LP  L  Y DMW
Sbjct: 292 GEDDSSLALTGDLPDIVAWKKLLPRSLRFYADMW 325


>ref|XP_004172274.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101205232,
           partial [Cucumis sativus]
          Length = 323

 Score =  344 bits (883), Expect = 3e-92
 Identities = 170/272 (62%), Positives = 207/272 (76%)
 Frame = +2

Query: 95  QSKQEEYNNDEEDGGIPSNEVKTLVKFKSNHNYIRVLQVSRRADHPLAGSRLLLLDSPGN 274
           Q++        +D GIPS++VK L KFKS HN+IRVL+VSRRA+HPLAGSRLLLLD+PGN
Sbjct: 52  QTQSSNPKKRTQDDGIPSDDVKILAKFKSRHNFIRVLEVSRRAEHPLAGSRLLLLDAPGN 111

Query: 275 IHSISFLFKSLTATYFDVFATFPPILPSGPIAILGFGAGTAARLILHLYPESQIHGWELD 454
           IHSISFLFKSLT TYFDVFAT PPILPSGPI ILGFGAG+AAR IL LYPE  +HGWELD
Sbjct: 112 IHSISFLFKSLTNTYFDVFATLPPILPSGPIGILGFGAGSAARSILKLYPEVVVHGWELD 171

Query: 455 PSVISVGREFFGLEKLEKQNKGKLFIYIGDALEAEINDGFSGILVDLFAKGSLIPELQQA 634
           PSV++VGREFFG+ KLEK    +LFIYIG+AL A +  GF+GILVDLF++GSLIPEL+  
Sbjct: 172 PSVVAVGREFFGVSKLEKXYPDRLFIYIGNALNANVTGGFAGILVDLFSEGSLIPELEDP 231

Query: 635 ETWXXXXXXXXXXXXIMVNCGGSCVEAEDPEREGNAVMVETLKAMREVFAEKVFVLKLKH 814
            TW            +MVN GGSCVEAED  R+G  VM +TLKAM +V+ +K++VL+L +
Sbjct: 232 NTWRMLERCLMKGGRVMVNVGGSCVEAEDIRRDGKVVMEQTLKAMHQVYGKKLWVLRLGN 291

Query: 815 WKEDSCVAFTGPSPNMGFWKQALPLGLNSYVD 910
            ++DS +A TG  P++  WK+ LP  L  Y D
Sbjct: 292 GEDDSSLALTGDLPDIVAWKKLLPRSLRFYAD 323


>ref|XP_002866534.1| hypothetical protein ARALYDRAFT_496492 [Arabidopsis lyrata subsp.
           lyrata] gi|297312369|gb|EFH42793.1| hypothetical protein
           ARALYDRAFT_496492 [Arabidopsis lyrata subsp. lyrata]
          Length = 329

 Score =  344 bits (882), Expect = 3e-92
 Identities = 175/273 (64%), Positives = 206/273 (75%), Gaps = 2/273 (0%)
 Frame = +2

Query: 128 EDGGIPSNEVKTLVKFKSNHNYIRVLQVSRRADHPLAGSRLLLLDSPGNIHSISFLFKSL 307
           +D GIP+++VKT+ KFKS HNYIRV++VSR+ +HPLAGSRLLLLD+PGNIHSISFL K+L
Sbjct: 56  DDDGIPADDVKTIAKFKSRHNYIRVIEVSRKTNHPLAGSRLLLLDNPGNIHSISFLLKTL 115

Query: 308 TATYFDVFATFPPILPSGPIAILGFGAGTAARLILHLYP-ESQIHGWELDPSVISVGREF 484
           T +YFDVFAT PPI+P GPI ILGFGAG+ ARLIL LYP E  IHGWELDPSVI VGREF
Sbjct: 116 TDSYFDVFATLPPIIPPGPIGILGFGAGSTARLILELYPPEIAIHGWELDPSVIDVGREF 175

Query: 485 FGLEKLEKQNKGKLFIYIGDALEAEINDGFSGILVDLFAKGSLIPELQQAETWXXXXXXX 664
           FGL KLE+ +K ++FI IGDAL+A +  GFSGILVDLF+KGS+I ELQ  + W       
Sbjct: 176 FGLSKLERDHKDRIFINIGDALKASVKTGFSGILVDLFSKGSVIKELQDPQVWEDLKCRL 235

Query: 665 XXXXXIMVNCGGSCVEAEDPEREGNAVMVETLKAMREVFAEKVFVLKLKHWKEDSCVAFT 844
                IMVN GG CVEAED ER+G  VM ETLKAM +VF +K+FVL L +   DS VA T
Sbjct: 236 RNRGRIMVNVGGKCVEAEDSERDGGLVMEETLKAMNQVFGDKLFVLTLGN-GNDSSVALT 294

Query: 845 GPSPNMGFWKQALP-LGLNSYVDMWAPLSSLKL 940
           G  P++  WK+ LP  GL SYVDMW P     L
Sbjct: 295 GDLPDLDAWKKRLPRSGLRSYVDMWIPYREFSL 327


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