BLASTX nr result

ID: Dioscorea21_contig00012680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012680
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281399.1| PREDICTED: trafficking protein particle comp...   347   7e-94
ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|1...   345   3e-93
ref|XP_002522846.1| Trafficking protein particle complex subunit...   339   2e-91
gb|AFK41630.1| unknown [Lotus japonicus]                              338   4e-91
ref|XP_002448719.1| hypothetical protein SORBIDRAFT_06g032040 [S...   333   1e-89

>ref|XP_002281399.1| PREDICTED: trafficking protein particle complex subunit 3 [Vitis
           vinifera] gi|147765421|emb|CAN64900.1| hypothetical
           protein VITISV_041653 [Vitis vinifera]
           gi|297735985|emb|CBI23959.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  347 bits (891), Expect = 7e-94
 Identities = 168/186 (90%), Positives = 178/186 (95%)
 Frame = -1

Query: 594 MAPLPPRSGDAVFANIEHVNAELFSLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGVRL 415
           MAP  PRSGDA+FAN+E VNAELF+LTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIG+RL
Sbjct: 1   MAPAAPRSGDAIFANVERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 414 IDEFLAKSNVSSCSDFKETADVIAKVGFKMFLGVTASVTNWDADGMSCSLILEDNPLVDF 235
           IDEFLAKSNVS C DFKETA+ IAKVGFKMFLGVTASVTNWDADG SCSL+LEDNPLVDF
Sbjct: 61  IDEFLAKSNVSRCVDFKETAEAIAKVGFKMFLGVTASVTNWDADGTSCSLVLEDNPLVDF 120

Query: 234 VELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDMLHGDDAYELRVKLLKQVPEEY 55
           VELPDTCQGLYYCNILSGV+RGALEMVSMKTEVTWIRDML GDDAYEL+VKLLKQVPEEY
Sbjct: 121 VELPDTCQGLYYCNILSGVVRGALEMVSMKTEVTWIRDMLRGDDAYELQVKLLKQVPEEY 180

Query: 54  PYKDDD 37
           PYKDD+
Sbjct: 181 PYKDDE 186


>ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|118484767|gb|ABK94252.1|
           unknown [Populus trichocarpa]
           gi|222858187|gb|EEE95734.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  345 bits (886), Expect = 3e-93
 Identities = 166/186 (89%), Positives = 179/186 (96%)
 Frame = -1

Query: 594 MAPLPPRSGDAVFANIEHVNAELFSLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGVRL 415
           MAP+ PRSGDA+FA++EHVNAELF+LTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIGVRL
Sbjct: 1   MAPVAPRSGDAIFASVEHVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGVRL 60

Query: 414 IDEFLAKSNVSSCSDFKETADVIAKVGFKMFLGVTASVTNWDADGMSCSLILEDNPLVDF 235
           IDEFLAKSNVS C DFKETADVIAKVGFKMFLGV ASVTNWDADG  CS++LEDNPLVDF
Sbjct: 61  IDEFLAKSNVSRCVDFKETADVIAKVGFKMFLGVGASVTNWDADGTCCSIVLEDNPLVDF 120

Query: 234 VELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDMLHGDDAYELRVKLLKQVPEEY 55
           VELPDTCQGLYYCNILSGV+RGALEMVSMKTEVTW+RDML GDDA+EL+VKLLKQVPEEY
Sbjct: 121 VELPDTCQGLYYCNILSGVVRGALEMVSMKTEVTWVRDMLRGDDAFELQVKLLKQVPEEY 180

Query: 54  PYKDDD 37
           PYKDD+
Sbjct: 181 PYKDDE 186


>ref|XP_002522846.1| Trafficking protein particle complex subunit, putative [Ricinus
           communis] gi|223537930|gb|EEF39544.1| Trafficking
           protein particle complex subunit, putative [Ricinus
           communis]
          Length = 186

 Score =  339 bits (870), Expect = 2e-91
 Identities = 163/186 (87%), Positives = 178/186 (95%)
 Frame = -1

Query: 594 MAPLPPRSGDAVFANIEHVNAELFSLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGVRL 415
           MAP+ PRSGDA+FA++E VNAELF+LTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIG+RL
Sbjct: 1   MAPVGPRSGDAIFASVERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 414 IDEFLAKSNVSSCSDFKETADVIAKVGFKMFLGVTASVTNWDADGMSCSLILEDNPLVDF 235
           +DEFLAKSNV+ C DF+ETA+VIAKVGFKMFLGV+ASVTNWDADG  CS+ILEDNPLVDF
Sbjct: 61  VDEFLAKSNVNRCVDFRETAEVIAKVGFKMFLGVSASVTNWDADGTCCSIILEDNPLVDF 120

Query: 234 VELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDMLHGDDAYELRVKLLKQVPEEY 55
           VELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTW RDML GDDAYEL+VKLLKQVPEEY
Sbjct: 121 VELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWARDMLRGDDAYELQVKLLKQVPEEY 180

Query: 54  PYKDDD 37
           PYKDD+
Sbjct: 181 PYKDDE 186


>gb|AFK41630.1| unknown [Lotus japonicus]
          Length = 186

 Score =  338 bits (867), Expect = 4e-91
 Identities = 161/186 (86%), Positives = 177/186 (95%)
 Frame = -1

Query: 594 MAPLPPRSGDAVFANIEHVNAELFSLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGVRL 415
           MAP+ PRSGDA+FANIE VNAELF+LTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIG+RL
Sbjct: 1   MAPVAPRSGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 414 IDEFLAKSNVSSCSDFKETADVIAKVGFKMFLGVTASVTNWDADGMSCSLILEDNPLVDF 235
           +DEFLAKSNVS C DF+ET DVIAKVGFKMFLGVTASVTNWDA+G  CS++LEDNPLVDF
Sbjct: 61  VDEFLAKSNVSRCVDFRETTDVIAKVGFKMFLGVTASVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 234 VELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDMLHGDDAYELRVKLLKQVPEEY 55
           VELPDTCQGLYYCNILSGVIRGAL+MVSMKTEVTW+RD+L GDD +EL+VKLLKQVPEEY
Sbjct: 121 VELPDTCQGLYYCNILSGVIRGALDMVSMKTEVTWLRDVLRGDDVFELQVKLLKQVPEEY 180

Query: 54  PYKDDD 37
           PYKDD+
Sbjct: 181 PYKDDE 186


>ref|XP_002448719.1| hypothetical protein SORBIDRAFT_06g032040 [Sorghum bicolor]
           gi|241939902|gb|EES13047.1| hypothetical protein
           SORBIDRAFT_06g032040 [Sorghum bicolor]
          Length = 185

 Score =  333 bits (855), Expect = 1e-89
 Identities = 159/184 (86%), Positives = 175/184 (95%)
 Frame = -1

Query: 588 PLPPRSGDAVFANIEHVNAELFSLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGVRLID 409
           P  P+SGDA+FA+++ VNAELF+LTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIG RL+D
Sbjct: 2   PPAPKSGDALFASVDRVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGTRLVD 61

Query: 408 EFLAKSNVSSCSDFKETADVIAKVGFKMFLGVTASVTNWDADGMSCSLILEDNPLVDFVE 229
           EFLAKSNVS C DFKETADVIAK+GFKMFLGVTA+VTNWDA+G SCSL+LEDNPLVDFVE
Sbjct: 62  EFLAKSNVSRCVDFKETADVIAKLGFKMFLGVTATVTNWDAEGTSCSLVLEDNPLVDFVE 121

Query: 228 LPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDMLHGDDAYELRVKLLKQVPEEYPY 49
           LPDTCQGL YCN+LSGVIRGALEMVSMKTEVTW+RDML GDDAYE+RVKL+KQVPEEYPY
Sbjct: 122 LPDTCQGLQYCNLLSGVIRGALEMVSMKTEVTWVRDMLRGDDAYEMRVKLIKQVPEEYPY 181

Query: 48  KDDD 37
           KDDD
Sbjct: 182 KDDD 185


Top