BLASTX nr result

ID: Dioscorea21_contig00012665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012665
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21566.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002276999.1| PREDICTED: glutamate receptor 3.6-like [Viti...    61   1e-07
ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinu...    59   5e-07
dbj|BAL15058.1| glutamate receptor 3.5 [Solanum lycopersicum]          57   2e-06
ref|XP_003612376.1| Glutamate receptor 3.6 [Medicago truncatula]...    56   3e-06

>emb|CBI21566.3| unnamed protein product [Vitis vinifera]
          Length = 936

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/80 (38%), Positives = 51/80 (63%)
 Frame = +2

Query: 2    MACFLALVIHFSIIMRQFIRHYNPTDSIASRNTITGRSFQDFLSFFDEKEENVKNKSNRM 181
            +AC +AL I+  +++RQF +HY      + +N+ +GR  Q FLSF DEKEE+VK++S R 
Sbjct: 840  LACLVALFIYAILMVRQFSKHYIEESDSSVQNSRSGR-LQTFLSFVDEKEEDVKSRSKRR 898

Query: 182  KMQNGESNGVVDDN*LSINR 241
            +M+   +    +D  LS ++
Sbjct: 899  QMEMASTRSTYEDESLSSSK 918


>ref|XP_002276999.1| PREDICTED: glutamate receptor 3.6-like [Vitis vinifera]
          Length = 938

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/80 (38%), Positives = 51/80 (63%)
 Frame = +2

Query: 2    MACFLALVIHFSIIMRQFIRHYNPTDSIASRNTITGRSFQDFLSFFDEKEENVKNKSNRM 181
            +AC +AL I+  +++RQF +HY      + +N+ +GR  Q FLSF DEKEE+VK++S R 
Sbjct: 842  LACLVALFIYAILMVRQFSKHYIEESDSSVQNSRSGR-LQTFLSFVDEKEEDVKSRSKRR 900

Query: 182  KMQNGESNGVVDDN*LSINR 241
            +M+   +    +D  LS ++
Sbjct: 901  QMEMASTRSTYEDESLSSSK 920


>ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 924

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/74 (44%), Positives = 43/74 (58%)
 Frame = +2

Query: 2    MACFLALVIHFSIIMRQFIRHYNPTDSIASRNTITGRSFQDFLSFFDEKEENVKNKSNRM 181
            +ACFLAL I+F +++RQF RH  P DS  S  +   R  Q FLSF DEK +  K+KS R 
Sbjct: 829  IACFLALFIYFCMMLRQFSRHA-PEDSDPSIRSSRSRRIQTFLSFVDEKADESKSKSKRK 887

Query: 182  KMQNGESNGVVDDN 223
            +       G  DD+
Sbjct: 888  RGDESIGYGKEDDS 901


>dbj|BAL15058.1| glutamate receptor 3.5 [Solanum lycopersicum]
          Length = 958

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 47/63 (74%)
 Frame = +2

Query: 2    MACFLALVIHFSIIMRQFIRHYNPTDSIASRNTITGRSFQDFLSFFDEKEENVKNKSNRM 181
            +ACFLAL+I+F ++  Q+ ++Y P   +AS ++ +GR  Q FLSF DEKEE+V+++S R 
Sbjct: 863  LACFLALLIYFVMLACQYCQYY-PNSEVASESSRSGR-LQTFLSFADEKEESVRSRSKRR 920

Query: 182  KMQ 190
            +++
Sbjct: 921  QLE 923


>ref|XP_003612376.1| Glutamate receptor 3.6 [Medicago truncatula]
            gi|355513711|gb|AES95334.1| Glutamate receptor 3.6
            [Medicago truncatula]
          Length = 983

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = +2

Query: 5    ACFLALVIHFSIIMRQFIRHYNPTDSIASRNTITGRS-FQDFLSFFDEKEENVKNKSNRM 181
            AC +AL+I+F  I+RQ+ +H +       +N  +G S F+ F+SF DEKEE VKN+S R 
Sbjct: 876  ACLVALLIYFIRIIRQYTKHRSEELDSPDQNPSSGSSGFKKFMSFADEKEETVKNRSKRK 935

Query: 182  KMQ 190
            KM+
Sbjct: 936  KME 938


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