BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012656
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi...   324   9e-87
ref|XP_002303045.1| predicted protein [Populus trichocarpa] gi|2...   313   2e-83
ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|2...   313   2e-83
ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group] g...   311   5e-83
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi...   308   7e-82

>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Vitis vinifera]
           gi|297744374|emb|CBI37344.3| unnamed protein product
           [Vitis vinifera]
          Length = 497

 Score =  324 bits (830), Expect = 9e-87
 Identities = 156/198 (78%), Positives = 177/198 (89%)
 Frame = -1

Query: 624 ATLRAFGGSGQIEMMEKCYDKFQSSGINPNIKTFNILLDSYGKSQKYEKMSSVMEYMQKY 445
           +TLRAFG SGQIE MEKCY+KFQS+GI PNIKTFNILLDSYGK++KYEKMS+VMEYMQKY
Sbjct: 285 STLRAFGSSGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKY 344

Query: 444 YFSWTLVTYNVVIDAFGRAGDLRQMEYIFRLMKSERIKPNCVTLCSLVRAYGRVEAVDKI 265
           +FSWT+VTYNVVIDAFGRAGDL+QMEY+FRLM+SERIKP+CVTLCSLVRAYGR    +KI
Sbjct: 345 HFSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKI 404

Query: 264 KGVLRYIENSDVTLDIVFFNCLVDAYGRAGCLAEMKEVLEIMKSSGCKPDKITYSTMIKA 85
            GVLR+IENSDV LDIVFFNCLVDAYGR GC AEMK VLE+MK  GCKPDKITY TMIKA
Sbjct: 405 GGVLRFIENSDVMLDIVFFNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKA 464

Query: 84  YQGRGLRDHAQELRDVIR 31
           Y+  G+   A+EL+ ++R
Sbjct: 465 YKIGGMTSCAKELQGLMR 482



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 49/202 (24%), Positives = 103/202 (50%), Gaps = 2/202 (0%)
 Frame = -1

Query: 624 ATLRAFGGSGQIEMMEKCYDKFQSS-GINPNIKTFNILLDSYGKSQKYEKMSSVMEYMQK 448
           A L A+  SG  +      +K +++    P++ T+++L+ S  +   ++K+  ++  M  
Sbjct: 178 ALLSAYSRSGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMAN 237

Query: 447 YYFSWTLVTYNVVIDAFGRAGDLRQMEY-IFRLMKSERIKPNCVTLCSLVRAYGRVEAVD 271
                  VTYN +IDA+G+A    +ME  +  +++  + +P+  T+ S +RA+G    ++
Sbjct: 238 QGIKPNTVTYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIE 297

Query: 270 KIKGVLRYIENSDVTLDIVFFNCLVDAYGRAGCLAEMKEVLEIMKSSGCKPDKITYSTMI 91
            ++      +++ +  +I  FN L+D+YG+A    +M  V+E M+        +TY+ +I
Sbjct: 298 TMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVI 357

Query: 90  KAYQGRGLRDHAQELRDVIRQE 25
            A+   G     + L  ++R E
Sbjct: 358 DAFGRAGDLKQMEYLFRLMRSE 379


>ref|XP_002303045.1| predicted protein [Populus trichocarpa] gi|222844771|gb|EEE82318.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  313 bits (801), Expect = 2e-83
 Identities = 146/197 (74%), Positives = 174/197 (88%)
 Frame = -1

Query: 624 ATLRAFGGSGQIEMMEKCYDKFQSSGINPNIKTFNILLDSYGKSQKYEKMSSVMEYMQKY 445
           +T+RAFGGSGQ+EMME CY+KFQS+GI PNIKTFNILLDSYGK+  Y+KMS+VMEYMQ+Y
Sbjct: 177 STIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRY 236

Query: 444 YFSWTLVTYNVVIDAFGRAGDLRQMEYIFRLMKSERIKPNCVTLCSLVRAYGRVEAVDKI 265
           ++SWT+VTYNVVIDAFGRAGDL+QMEY+FRLM+SERIKP+CVTLCSLVRAY      +KI
Sbjct: 237 HYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKI 296

Query: 264 KGVLRYIENSDVTLDIVFFNCLVDAYGRAGCLAEMKEVLEIMKSSGCKPDKITYSTMIKA 85
             VLR+IENSDVTLD VFFNCLVDAYGR  C AEMKEVLE+M+  GCKPDK+TY TMIKA
Sbjct: 297 GSVLRFIENSDVTLDTVFFNCLVDAYGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIKA 356

Query: 84  YQGRGLRDHAQELRDVI 34
           Y  +G+  HA++LR+++
Sbjct: 357 YSIKGMTSHAKKLRNLL 373



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 52/202 (25%), Positives = 105/202 (51%), Gaps = 2/202 (0%)
 Frame = -1

Query: 624 ATLRAFGGSGQIEMMEKCYDKFQSS-GINPNIKTFNILLDSYGKSQKYEKMSSVMEYMQK 448
           A L A+G SG  +      ++ +++    P++ T++IL+ S  +   ++K+  ++  M+ 
Sbjct: 70  ALLSAYGRSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMES 129

Query: 447 YYFSWTLVTYNVVIDAFGRAGDLRQMEY-IFRLMKSERIKPNCVTLCSLVRAYGRVEAVD 271
                  VTYN VIDA+G+A    +ME  +  ++  +  +P+  T+ S +RA+G    ++
Sbjct: 130 LGIRPNTVTYNTVIDAYGKAKMFAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQME 189

Query: 270 KIKGVLRYIENSDVTLDIVFFNCLVDAYGRAGCLAEMKEVLEIMKSSGCKPDKITYSTMI 91
            ++      +++ +  +I  FN L+D+YG+AG   +M  V+E M+        +TY+ +I
Sbjct: 190 MMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVI 249

Query: 90  KAYQGRGLRDHAQELRDVIRQE 25
            A+   G     + L  ++R E
Sbjct: 250 DAFGRAGDLKQMEYLFRLMRSE 271



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 75/251 (29%)
 Frame = -1

Query: 597 GQIEMMEKCYDKFQS---SGINPNIKTFNILLDSYGKSQKYEKMSSVMEYMQK------- 448
           G+ +  +K +  FQ+    G     +++  LL +YG+S  ++K  S+ME M+        
Sbjct: 41  GKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKNTPDCRPD 100

Query: 447 ------------YYFSW-----------------TLVTYNVVIDAFGRA----------- 388
                         F++                   VTYN VIDA+G+A           
Sbjct: 101 VHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTYNTVIDAYGKAKMFAEMEATLM 160

Query: 387 -------------------------GDLRQMEYIFRLMKSERIKPNCVTLCSLVRAYGRV 283
                                    G +  ME  +   +S  I+PN  T   L+ +YG+ 
Sbjct: 161 EMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYGKA 220

Query: 282 EAVDKIKGVLRYIENSDVTLDIVFFNCLVDAYGRAGCLAEMKEVLEIMKSSGCKPDKITY 103
               K+  V+ Y++    +  IV +N ++DA+GRAG L +M+ +  +M+S   KP  +T 
Sbjct: 221 GNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTL 280

Query: 102 STMIKAYQGRG 70
            ++++AY+  G
Sbjct: 281 CSLVRAYREAG 291



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
 Frame = -1

Query: 516 LLDSYGKSQKYEKMSSVMEYMQKYYFSWTLVTYNVVIDAFGRAGDLRQMEYIFRLMK-SE 340
           L+   GK ++ +K   + + M     + T  +Y  ++ A+GR+G   +   I   MK + 
Sbjct: 36  LIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKNTP 95

Query: 339 RIKPNCVTLCSLVRAYGRVEAVDKIKGVLRYIENSDVTLDIVFFNCLVDAYGRAGCLAEM 160
             +P+  T   L+++  +V A DK++ +L  +E+  +  + V +N ++DAYG+A   AEM
Sbjct: 96  DCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTYNTVIDAYGKAKMFAEM 155

Query: 159 KEVL-EIMKSSGCKPDKITYSTMIKAYQGRG 70
           +  L E++    C+PD  T ++ I+A+ G G
Sbjct: 156 EATLMEMLSQQDCEPDVWTMNSTIRAFGGSG 186


>ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|222844770|gb|EEE82317.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  313 bits (801), Expect = 2e-83
 Identities = 146/197 (74%), Positives = 174/197 (88%)
 Frame = -1

Query: 624 ATLRAFGGSGQIEMMEKCYDKFQSSGINPNIKTFNILLDSYGKSQKYEKMSSVMEYMQKY 445
           +T+RAFGGSGQ+EMME CY+KFQS+GI PNIKTFNILLDSYGK+  Y+KMS+VMEYMQ+Y
Sbjct: 274 STIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRY 333

Query: 444 YFSWTLVTYNVVIDAFGRAGDLRQMEYIFRLMKSERIKPNCVTLCSLVRAYGRVEAVDKI 265
           ++SWT+VTYNVVIDAFGRAGDL+QMEY+FRLM+SERIKP+CVTLCSLVRAY      +KI
Sbjct: 334 HYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKI 393

Query: 264 KGVLRYIENSDVTLDIVFFNCLVDAYGRAGCLAEMKEVLEIMKSSGCKPDKITYSTMIKA 85
             VLR+IENSDVTLD VFFNCLVDAYGR  C AEMKEVLE+M+  GCKPDK+TY TMIKA
Sbjct: 394 GSVLRFIENSDVTLDTVFFNCLVDAYGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIKA 453

Query: 84  YQGRGLRDHAQELRDVI 34
           Y  +G+  HA++LR+++
Sbjct: 454 YSIKGMTSHAKKLRNLL 470



 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 49/163 (30%), Positives = 84/163 (51%)
 Frame = -1

Query: 558 QSSGINPNIKTFNILLDSYGKSQKYEKMSSVMEYMQKYYFSWTLVTYNVVIDAFGRAGDL 379
           +S GI PN  TF             E  +++ME + +      + T N  I AFG +G +
Sbjct: 238 ESLGIRPNTVTFA------------EMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQM 285

Query: 378 RQMEYIFRLMKSERIKPNCVTLCSLVRAYGRVEAVDKIKGVLRYIENSDVTLDIVFFNCL 199
             ME  +   +S  I+PN  T   L+ +YG+     K+  V+ Y++    +  IV +N +
Sbjct: 286 EMMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVV 345

Query: 198 VDAYGRAGCLAEMKEVLEIMKSSGCKPDKITYSTMIKAYQGRG 70
           +DA+GRAG L +M+ +  +M+S   KP  +T  ++++AY+  G
Sbjct: 346 IDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAG 388



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
 Frame = -1

Query: 597 GQIEMMEKCYDKFQS---SGINPNIKTFNILLDSYGKSQKYEKMSSVMEYMQKYYFSWTL 427
           G+ +  +K +  FQ+    G     +++  LL +YG+S  ++K  S+ME M+        
Sbjct: 151 GKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKNTPDCRPD 210

Query: 426 V-TYNVVIDAFGRAGDLRQMEYIFRLMKSERIKPNCVTLC-------------------- 310
           V TY+++I +  +     +++ +   M+S  I+PN VT                      
Sbjct: 211 VHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTFAEMEATLMEMLSQQDCEPDVW 270

Query: 309 ---SLVRAYGRVEAVDKIKGVLRYIENSDVTLDIVFFNCLVDAYGRAGCLAEMKEVLEIM 139
              S +RA+G    ++ ++      +++ +  +I  FN L+D+YG+AG   +M  V+E M
Sbjct: 271 TMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYM 330

Query: 138 KSSGCKPDKITYSTMIKAYQGRGLRDHAQELRDVIRQE 25
           +        +TY+ +I A+   G     + L  ++R E
Sbjct: 331 QRYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSE 368


>ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
           gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa
           Japonica Group] gi|113594979|dbj|BAF18853.1|
           Os06g0172000 [Oryza sativa Japonica Group]
           gi|215697063|dbj|BAG91057.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218197679|gb|EEC80106.1| hypothetical protein
           OsI_21852 [Oryza sativa Indica Group]
           gi|222635046|gb|EEE65178.1| hypothetical protein
           OsJ_20289 [Oryza sativa Japonica Group]
          Length = 511

 Score =  311 bits (798), Expect = 5e-83
 Identities = 152/197 (77%), Positives = 173/197 (87%), Gaps = 1/197 (0%)
 Frame = -1

Query: 624 ATLRAFGGSGQIEMMEKCYDKFQSSGINPNIKTFNILLDSYGKSQKYEKMSSVMEYMQKY 445
           +TLRAFGGSGQIE ME CY+KFQ+SGI+PNIKT+NILLDSYGK++ YEKM +VMEYMQKY
Sbjct: 306 STLRAFGGSGQIETMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKY 365

Query: 444 YFSWTLVTYNVVIDAFGRAGDLRQMEYIFRLMKSERIKPNCVTLCSLVRAYGRVEAVDKI 265
           Y+SWT+VTYNVVIDAFGRAGDL QMEYIFRLMKSERIKPNCVTLCSLVRAYGR   V KI
Sbjct: 366 YYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKI 425

Query: 264 KGVLRYIENSDVTLDIVFFNCLVDAYGRAGCLAEMKEVLEIMKSSGCKPDKITYSTMIKA 85
           K VLR +ENSD+TLDIVFFNCLVDA+GR GCLAEM +VL+IMK   CKPDK+T +TMIK 
Sbjct: 426 KTVLRIVENSDITLDIVFFNCLVDAFGRVGCLAEMWDVLDIMKLQRCKPDKVTCTTMIKW 485

Query: 84  YQGRGLRDH-AQELRDV 37
           +  +G+ DH  Q LRD+
Sbjct: 486 FLIKGIDDHRVQYLRDL 502



 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 61/234 (26%), Positives = 118/234 (50%), Gaps = 36/234 (15%)
 Frame = -1

Query: 624 ATLRAFGGSGQIEMMEKCYDKFQSS-GINPNIKTFNILLDSYGKSQKYEKMSSVMEYMQK 448
           A + A+  SG+ +      ++ +++ G  P+++T++IL+ S   +  +E++  +ME M +
Sbjct: 200 ALVSAYSRSGRFDRAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMAR 259

Query: 447 YYFSWTLVTYNVVIDAFGRAGDLRQMEYIFRLMKSERIKPNCVTLCSLVRA--------- 295
                 +VTYN +IDA+G+AG   +ME     M +E  KP+  T+ S +RA         
Sbjct: 260 AGIRPNVVTYNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIET 319

Query: 294 --------------------------YGRVEAVDKIKGVLRYIENSDVTLDIVFFNCLVD 193
                                     YG+ +  +K+  V+ Y++    +  IV +N ++D
Sbjct: 320 MESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVID 379

Query: 192 AYGRAGCLAEMKEVLEIMKSSGCKPDKITYSTMIKAYQGRGLRDHAQELRDVIR 31
           A+GRAG L +M+ +  +MKS   KP+ +T  ++++AY   G     ++++ V+R
Sbjct: 380 AFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSLVRAY---GRAGDVKKIKTVLR 430


>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Glycine max]
          Length = 515

 Score =  308 bits (788), Expect = 7e-82
 Identities = 142/197 (72%), Positives = 173/197 (87%)
 Frame = -1

Query: 624 ATLRAFGGSGQIEMMEKCYDKFQSSGINPNIKTFNILLDSYGKSQKYEKMSSVMEYMQKY 445
           +TLRAFG  GQIE MEKCY+KFQ++GI PN++TFNILLDSYGK+Q Y+KMS+VMEYMQKY
Sbjct: 304 STLRAFGNIGQIETMEKCYEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKY 363

Query: 444 YFSWTLVTYNVVIDAFGRAGDLRQMEYIFRLMKSERIKPNCVTLCSLVRAYGRVEAVDKI 265
           ++SWT+VT+N+VIDAFG+AGDL+QMEY+FRLM+SERIKP+CVTLCSLVRAY R    +KI
Sbjct: 364 HYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKI 423

Query: 264 KGVLRYIENSDVTLDIVFFNCLVDAYGRAGCLAEMKEVLEIMKSSGCKPDKITYSTMIKA 85
            GVLR++ENSDV LD VFFNCLVDAY R GCLAEMK VLE+MK +GCKPD +TY TMIK 
Sbjct: 424 SGVLRFVENSDVLLDTVFFNCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIVTYRTMIKT 483

Query: 84  YQGRGLRDHAQELRDVI 34
           Y  +G+  HA+ELR+++
Sbjct: 484 YTYKGMDSHAKELRELL 500



 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 54/202 (26%), Positives = 108/202 (53%), Gaps = 2/202 (0%)
 Frame = -1

Query: 624 ATLRAFGGSGQIEMMEKCYDKFQSS-GINPNIKTFNILLDSYGKSQKYEKMSSVMEYMQK 448
           A L A+  SG ++      ++ +++ G  P+++T++ILL S  +   ++K+ S++  M  
Sbjct: 197 ALLSAYSRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMTN 256

Query: 447 YYFSWTLVTYNVVIDAFGRAGDLRQMEYIFRLMKSERI-KPNCVTLCSLVRAYGRVEAVD 271
                  VTYN +IDA+G+A    +ME I   M ++R  +P+  T+ S +RA+G +  ++
Sbjct: 257 RGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIE 316

Query: 270 KIKGVLRYIENSDVTLDIVFFNCLVDAYGRAGCLAEMKEVLEIMKSSGCKPDKITYSTMI 91
            ++      +N+ +  ++  FN L+D+YG+A    +M  V+E M+        +T++ +I
Sbjct: 317 TMEKCYEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVI 376

Query: 90  KAYQGRGLRDHAQELRDVIRQE 25
            A+   G     + L  ++R E
Sbjct: 377 DAFGKAGDLKQMEYLFRLMRSE 398