BLASTX nr result

ID: Dioscorea21_contig00012645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012645
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE63593.1| hypothetical protein OsJ_18410 [Oryza sativa Japo...    57   1e-06
gb|EAY97905.1| hypothetical protein OsI_19822 [Oryza sativa Indi...    57   1e-06
ref|NP_001055435.1| Os05g0389600 [Oryza sativa Japonica Group] g...    57   1e-06
dbj|BAJ97192.1| predicted protein [Hordeum vulgare subsp. vulgare]     55   8e-06

>gb|EEE63593.1| hypothetical protein OsJ_18410 [Oryza sativa Japonica Group]
          Length = 521

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
 Frame = +1

Query: 43  DRAHMDLGGSEENSDETPGNVVFENAAHSVDS--NNTSLESRSAF-SNRDQVEAVNXXXX 213
           D  H ++  S + +    G         ++D   ++ + ++R+A  + R+ +E+ N    
Sbjct: 199 DGGHGNVDNSSDANISQQGGASTAGIDSTLDMLRDSVTAQARAAHQARRNLLESDNANLR 258

Query: 214 XXXXXXXPQEPFEGSVRFSRTLSVGRLRDRVLR 312
                  PQEPFEGSVRFSRTLSVGRLRDRVLR
Sbjct: 259 YSNRRMGPQEPFEGSVRFSRTLSVGRLRDRVLR 291


>gb|EAY97905.1| hypothetical protein OsI_19822 [Oryza sativa Indica Group]
          Length = 521

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
 Frame = +1

Query: 43  DRAHMDLGGSEENSDETPGNVVFENAAHSVDS--NNTSLESRSAF-SNRDQVEAVNXXXX 213
           D  H ++  S + +    G         ++D   ++ + ++R+A  + R+ +E+ N    
Sbjct: 199 DGGHGNVDNSSDANISQQGGASTAGIDSTLDMLRDSVTAQARAAHQARRNLLESDNANLR 258

Query: 214 XXXXXXXPQEPFEGSVRFSRTLSVGRLRDRVLR 312
                  PQEPFEGSVRFSRTLSVGRLRDRVLR
Sbjct: 259 YSNRRMGPQEPFEGSVRFSRTLSVGRLRDRVLR 291


>ref|NP_001055435.1| Os05g0389600 [Oryza sativa Japonica Group]
           gi|48926652|gb|AAT47441.1| unknown protein, contains
           zinc finger domain, PF00097 [Oryza sativa Japonica
           Group] gi|113578986|dbj|BAF17349.1| Os05g0389600 [Oryza
           sativa Japonica Group] gi|215715354|dbj|BAG95105.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 549

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
 Frame = +1

Query: 43  DRAHMDLGGSEENSDETPGNVVFENAAHSVDS--NNTSLESRSAF-SNRDQVEAVNXXXX 213
           D  H ++  S + +    G         ++D   ++ + ++R+A  + R+ +E+ N    
Sbjct: 199 DGGHGNVDNSSDANISQQGGASTAGIDSTLDMLRDSVTAQARAAHQARRNLLESDNANLR 258

Query: 214 XXXXXXXPQEPFEGSVRFSRTLSVGRLRDRVLR 312
                  PQEPFEGSVRFSRTLSVGRLRDRVLR
Sbjct: 259 YSNRRMGPQEPFEGSVRFSRTLSVGRLRDRVLR 291


>dbj|BAJ97192.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 563

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/104 (37%), Positives = 53/104 (50%)
 Frame = +1

Query: 1   VSASLSFSNSDRGVDRAHMDLGGSEENSDETPGNVVFENAAHSVDSNNTSLESRSAFSNR 180
           +S  LS S +  G     +D    ++    TPG  ++ +     DS  T   +    + R
Sbjct: 203 MSTGLSTSANPVGNVDHSLDANIPQQGGASTPG--IYSSLDMLRDSVTTQARATHQ-ARR 259

Query: 181 DQVEAVNXXXXXXXXXXXPQEPFEGSVRFSRTLSVGRLRDRVLR 312
           + +E+ +           PQEP EGSVRFSRTLSVGRLRDRVLR
Sbjct: 260 NLLESEDANLRHSHRRMGPQEPSEGSVRFSRTLSVGRLRDRVLR 303


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