BLASTX nr result

ID: Dioscorea21_contig00012606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012606
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306302.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
emb|CBI29444.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_003601935.1| EPIDERMAL PATTERNING FACTOR-like protein [Me...    57   2e-06
ref|XP_002873450.1| hypothetical protein ARALYDRAFT_487859 [Arab...    57   2e-06
ref|NP_196593.1| epidermal patterning factor-like protein 1 [Ara...    57   2e-06

>ref|XP_002306302.1| predicted protein [Populus trichocarpa] gi|222855751|gb|EEE93298.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/35 (68%), Positives = 27/35 (77%)
 Frame = +1

Query: 115 PQGMVMDEKIRLGSTPPSCRNRCKECSPCAAVQVP 219
           PQG+  +EK RLGSTPPSC N+C  C PC AVQVP
Sbjct: 41  PQGIAFEEKARLGSTPPSCHNKCNGCHPCIAVQVP 75


>emb|CBI29444.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = +1

Query: 118 QGMVMDEKIRLGSTPPSCRNRCKECSPCAAVQVP 219
           +G++ +EK RLGSTPPSC N+C EC PC AVQVP
Sbjct: 61  RGLLFEEKTRLGSTPPSCHNKCNECHPCMAVQVP 94


>ref|XP_003601935.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula]
           gi|355490983|gb|AES72186.1| EPIDERMAL PATTERNING
           FACTOR-like protein [Medicago truncatula]
          Length = 121

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 21/35 (60%), Positives = 28/35 (80%)
 Frame = +1

Query: 115 PQGMVMDEKIRLGSTPPSCRNRCKECSPCAAVQVP 219
           P+G++ +EK RLGS PP+C N+C +C PC AVQVP
Sbjct: 38  PRGLLFEEKNRLGSAPPTCHNKCNQCHPCMAVQVP 72


>ref|XP_002873450.1| hypothetical protein ARALYDRAFT_487859 [Arabidopsis lyrata subsp.
           lyrata] gi|297319287|gb|EFH49709.1| hypothetical protein
           ARALYDRAFT_487859 [Arabidopsis lyrata subsp. lyrata]
          Length = 118

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = +1

Query: 115 PQGMVMDEKIRLGSTPPSCRNRCKECSPCAAVQVP 219
           PQ  ++++K RLGSTPPSC NRC  C PC A+QVP
Sbjct: 33  PQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVP 67


>ref|NP_196593.1| epidermal patterning factor-like protein 1 [Arabidopsis thaliana]
           gi|75174184|sp|Q9LFT5.1|EPFL1_ARATH RecName:
           Full=EPIDERMAL PATTERNING FACTOR-like protein 1;
           Short=EPF-like protein 1; Flags: Precursor
           gi|8953412|emb|CAB96687.1| putative protein [Arabidopsis
           thaliana] gi|38566574|gb|AAR24177.1| At5g10310
           [Arabidopsis thaliana] gi|40823959|gb|AAR92318.1|
           At5g10310 [Arabidopsis thaliana]
           gi|332004136|gb|AED91519.1| epidermal patterning
           factor-like protein 1 [Arabidopsis thaliana]
          Length = 122

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = +1

Query: 115 PQGMVMDEKIRLGSTPPSCRNRCKECSPCAAVQVP 219
           PQ  ++++K RLGSTPPSC NRC  C PC A+QVP
Sbjct: 37  PQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVP 71


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