BLASTX nr result

ID: Dioscorea21_contig00012597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012597
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana] g...   395   e-107
ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arab...   394   e-107
ref|NP_001189748.1| Golgi SNARE 12 protein [Arabidopsis thaliana...   390   e-106
gb|AFK39131.1| unknown [Lotus japonicus]                              386   e-105
ref|XP_002320713.1| predicted protein [Populus trichocarpa] gi|2...   385   e-105

>ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana]
           gi|13898895|gb|AAK48905.1|AF357529_1 Golgi SNARE 12
           protein [Arabidopsis thaliana] gi|2583133|gb|AAB82642.1|
           putative cis-Golgi SNARE protein [Arabidopsis thaliana]
           gi|88196757|gb|ABD43021.1| At2g45200 [Arabidopsis
           thaliana] gi|330255430|gb|AEC10524.1| Golgi SNARE 12
           protein [Arabidopsis thaliana]
          Length = 239

 Score =  395 bits (1014), Expect = e-107
 Identities = 200/240 (83%), Positives = 223/240 (92%)
 Frame = +2

Query: 122 MGDSALELQESGWEELRKEARKIEADLDVKLSSYGKLGARFTSSSGYVDSGSPTVGSGRS 301
           M +S+L+LQESGWEELR+EARKIE DLDVKLSSY KLGARFT   GYVD+GSPTVGSGRS
Sbjct: 1   MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQG-GYVDTGSPTVGSGRS 59

Query: 302 WKSMEMEIQSLLEKLLDINDAMSRCAATTAPTTSITQKLARHRDILHELTQEFRRTKGNL 481
           WKSMEMEIQSLLEKLLDIND+MSRCAA+ APTTS+TQKLARHRDILHE TQEFRR KGN+
Sbjct: 60  WKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNI 119

Query: 482 SSIREHAELLSSIRDDISESKASGSMSPRVHLLRERASIHGSINQIDEVIGQAQTTRSVL 661
           +S+REHAELLSS+RDDISE KASGSMSP V +LRERASIHGSI+ ID+VIGQAQ TR+VL
Sbjct: 120 NSLREHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVL 179

Query: 662 GTQKAIFGDVQGKVKQLGEKFPVIRELLGAIKRKRSRDTLILAAVIAACTLFLIIYWLSK 841
           G+Q+++F DVQGKVK LG+KFPVIR LLG+IKRKRSRDTLIL+AVIAACTLFLIIYWLSK
Sbjct: 180 GSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arabidopsis lyrata subsp.
           lyrata] gi|297327840|gb|EFH58260.1| hypothetical protein
           ARALYDRAFT_903960 [Arabidopsis lyrata subsp. lyrata]
          Length = 239

 Score =  394 bits (1013), Expect = e-107
 Identities = 200/240 (83%), Positives = 223/240 (92%)
 Frame = +2

Query: 122 MGDSALELQESGWEELRKEARKIEADLDVKLSSYGKLGARFTSSSGYVDSGSPTVGSGRS 301
           M +S+L+LQESGWEELR+EARKIE DLDVKLSSY KLGARFT   GYVD+GSPTVGSGRS
Sbjct: 1   MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQG-GYVDAGSPTVGSGRS 59

Query: 302 WKSMEMEIQSLLEKLLDINDAMSRCAATTAPTTSITQKLARHRDILHELTQEFRRTKGNL 481
           WKSMEMEIQSLLEKLLDIND+MSRCAA+ APTTS+TQKLARHRDILHE TQEFRR KGN+
Sbjct: 60  WKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNI 119

Query: 482 SSIREHAELLSSIRDDISESKASGSMSPRVHLLRERASIHGSINQIDEVIGQAQTTRSVL 661
           +S+REHAELLSS+RDDISE KASGSMSP V +LRERASIHGSI+ ID+VIGQAQ TR+VL
Sbjct: 120 NSMREHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVL 179

Query: 662 GTQKAIFGDVQGKVKQLGEKFPVIRELLGAIKRKRSRDTLILAAVIAACTLFLIIYWLSK 841
           G+Q+++F DVQGKVK LG+KFPVIR LLG+IKRKRSRDTLIL+AVIAACTLFLIIYWLSK
Sbjct: 180 GSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>ref|NP_001189748.1| Golgi SNARE 12 protein [Arabidopsis thaliana]
           gi|378405178|sp|O22151.2|GOS12_ARATH RecName: Full=Golgi
           SNAP receptor complex member 1-2; AltName: Full=Golgi
           SNARE 12 protein; Short=AtGOS12
           gi|330255431|gb|AEC10525.1| Golgi SNARE 12 protein
           [Arabidopsis thaliana]
          Length = 257

 Score =  390 bits (1002), Expect = e-106
 Identities = 201/257 (78%), Positives = 224/257 (87%), Gaps = 17/257 (6%)
 Frame = +2

Query: 122 MGDSALELQESGWEELRKEARKIEADLDVKLSSYGKLGARFTSS---------------- 253
           M +S+L+LQESGWEELR+EARKIE DLDVKLSSY KLGARFT                  
Sbjct: 1   MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGDTDLVMNYEKVLKCVL 60

Query: 254 -SGYVDSGSPTVGSGRSWKSMEMEIQSLLEKLLDINDAMSRCAATTAPTTSITQKLARHR 430
            SGYVD+GSPTVGSGRSWKSMEMEIQSLLEKLLDIND+MSRCAA+ APTTS+TQKLARHR
Sbjct: 61  VSGYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHR 120

Query: 431 DILHELTQEFRRTKGNLSSIREHAELLSSIRDDISESKASGSMSPRVHLLRERASIHGSI 610
           DILHE TQEFRR KGN++S+REHAELLSS+RDDISE KASGSMSP V +LRERASIHGSI
Sbjct: 121 DILHEYTQEFRRIKGNINSLREHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSI 180

Query: 611 NQIDEVIGQAQTTRSVLGTQKAIFGDVQGKVKQLGEKFPVIRELLGAIKRKRSRDTLILA 790
           + ID+VIGQAQ TR+VLG+Q+++F DVQGKVK LG+KFPVIR LLG+IKRKRSRDTLIL+
Sbjct: 181 SHIDDVIGQAQATRAVLGSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILS 240

Query: 791 AVIAACTLFLIIYWLSK 841
           AVIAACTLFLIIYWLSK
Sbjct: 241 AVIAACTLFLIIYWLSK 257


>gb|AFK39131.1| unknown [Lotus japonicus]
          Length = 239

 Score =  386 bits (992), Expect = e-105
 Identities = 195/240 (81%), Positives = 217/240 (90%)
 Frame = +2

Query: 122 MGDSALELQESGWEELRKEARKIEADLDVKLSSYGKLGARFTSSSGYVDSGSPTVGSGRS 301
           M DS LELQESGWEELRKEARKIE DLDVKLSSY KLGARFT   GYVD GSP +GS RS
Sbjct: 1   MRDSNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQG-GYVDGGSPPLGSSRS 59

Query: 302 WKSMEMEIQSLLEKLLDINDAMSRCAATTAPTTSITQKLARHRDILHELTQEFRRTKGNL 481
           WKSMEMEIQSLLEKLLDIND+MSRCAA+  P TS+TQKLARHRDILHE TQEFRR KGN+
Sbjct: 60  WKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNI 119

Query: 482 SSIREHAELLSSIRDDISESKASGSMSPRVHLLRERASIHGSINQIDEVIGQAQTTRSVL 661
           +S+REHAELL+S+RDDIS+ K SGSMSPR+ LLRERA+IHGSI+ ID+VI QAQ TRSVL
Sbjct: 120 NSMREHAELLTSVRDDISDFKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVL 179

Query: 662 GTQKAIFGDVQGKVKQLGEKFPVIRELLGAIKRKRSRDTLILAAVIAACTLFLIIYWLSK 841
           G+Q+A+FGDVQGKVK LG+KFP+IR LLG+I+RKRSRDTLIL+AVIAACTLFLIIYWLSK
Sbjct: 180 GSQRALFGDVQGKVKVLGDKFPIIRSLLGSIRRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>ref|XP_002320713.1| predicted protein [Populus trichocarpa] gi|222861486|gb|EEE99028.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  385 bits (990), Expect = e-105
 Identities = 195/243 (80%), Positives = 220/243 (90%), Gaps = 3/243 (1%)
 Frame = +2

Query: 122 MGDSALELQESGWEELRKEARKIEADLDVKLSSYGKLGARFTSSSG---YVDSGSPTVGS 292
           M D+ LELQESGWEELR+EARKIE DLDVKLSSY KLG+RFT   G   YV++GSPTVGS
Sbjct: 1   MTDTNLELQESGWEELRREARKIEGDLDVKLSSYAKLGSRFTQGGGGGGYVETGSPTVGS 60

Query: 293 GRSWKSMEMEIQSLLEKLLDINDAMSRCAATTAPTTSITQKLARHRDILHELTQEFRRTK 472
            RSWKSMEMEIQS LEKLLDINDAMSRCAA+ AP TS+TQKLARHRDILH+ TQEFRR K
Sbjct: 61  SRSWKSMEMEIQSSLEKLLDINDAMSRCAASAAPATSVTQKLARHRDILHDFTQEFRRIK 120

Query: 473 GNLSSIREHAELLSSIRDDISESKASGSMSPRVHLLRERASIHGSINQIDEVIGQAQTTR 652
           GN++S+REH+ELLSS+RDDISE KASGSMSPRV LLRERA+IHGSI+ ID+VI QAQTTR
Sbjct: 121 GNINSMREHSELLSSVRDDISEYKASGSMSPRVQLLRERAAIHGSISHIDDVINQAQTTR 180

Query: 653 SVLGTQKAIFGDVQGKVKQLGEKFPVIRELLGAIKRKRSRDTLILAAVIAACTLFLIIYW 832
           +VLG+Q+A FGDVQGKVK LG+KFP+IR LLG+I+R+RSRDTLIL+AVIAACTLFLIIYW
Sbjct: 181 AVLGSQRAFFGDVQGKVKLLGDKFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYW 240

Query: 833 LSK 841
           LSK
Sbjct: 241 LSK 243


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