BLASTX nr result

ID: Dioscorea21_contig00012575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012575
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325850.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|NP_001051273.1| Os03g0748900 [Oryza sativa Japonica Group] g...    81   8e-14
ref|XP_004156755.1| PREDICTED: uncharacterized protein LOC101232...    80   2e-13
ref|XP_004151849.1| PREDICTED: uncharacterized protein LOC101206...    80   2e-13
ref|XP_002319148.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_002325850.1| predicted protein [Populus trichocarpa] gi|222862725|gb|EEF00232.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/55 (74%), Positives = 48/55 (87%)
 Frame = -3

Query: 167 MQTRTVEVRNISDLASEREIREFFSFSGEIDHIEMRCDPGASRCKAFVTFKDPKA 3
           MQTRTVEVRN+SDLASERE+ EFFSFSGEI+HI ++ + G S+  AFVTFKDPKA
Sbjct: 6   MQTRTVEVRNVSDLASEREVHEFFSFSGEIEHIHIQRENGQSK-TAFVTFKDPKA 59


>ref|NP_001051273.1| Os03g0748900 [Oryza sativa Japonica Group]
           gi|18087665|gb|AAL58957.1|AC091811_6 putative
           arginine-rich protein [Oryza sativa Japonica Group]
           gi|108711084|gb|ABF98879.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113549744|dbj|BAF13187.1| Os03g0748900 [Oryza sativa
           Japonica Group] gi|215686507|dbj|BAG87768.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218193753|gb|EEC76180.1| hypothetical protein
           OsI_13512 [Oryza sativa Indica Group]
           gi|222625799|gb|EEE59931.1| hypothetical protein
           OsJ_12574 [Oryza sativa Japonica Group]
          Length = 278

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/52 (73%), Positives = 45/52 (86%)
 Frame = -3

Query: 158 RTVEVRNISDLASEREIREFFSFSGEIDHIEMRCDPGASRCKAFVTFKDPKA 3
           RTV VRNISDLA ERE+REFFSFSGEI+H+++RCD  A+   A+VTFKDPKA
Sbjct: 9   RTVRVRNISDLAGEREVREFFSFSGEIEHVDIRCDGVATGRTAYVTFKDPKA 60


>ref|XP_004156755.1| PREDICTED: uncharacterized protein LOC101232015 [Cucumis sativus]
          Length = 271

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/54 (70%), Positives = 48/54 (88%)
 Frame = -3

Query: 164 QTRTVEVRNISDLASEREIREFFSFSGEIDHIEMRCDPGASRCKAFVTFKDPKA 3
           QTRTV+V+++SDLA+EREI EFFSFSGEI+HIE++C+ G S+  AFVTF DPKA
Sbjct: 4   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESK-TAFVTFTDPKA 56


>ref|XP_004151849.1| PREDICTED: uncharacterized protein LOC101206093 [Cucumis sativus]
          Length = 271

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/54 (70%), Positives = 48/54 (88%)
 Frame = -3

Query: 164 QTRTVEVRNISDLASEREIREFFSFSGEIDHIEMRCDPGASRCKAFVTFKDPKA 3
           QTRTV+V+++SDLA+EREI EFFSFSGEI+HIE++C+ G S+  AFVTF DPKA
Sbjct: 4   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESK-TAFVTFTDPKA 56


>ref|XP_002319148.1| predicted protein [Populus trichocarpa] gi|222857524|gb|EEE95071.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/55 (72%), Positives = 48/55 (87%)
 Frame = -3

Query: 167 MQTRTVEVRNISDLASEREIREFFSFSGEIDHIEMRCDPGASRCKAFVTFKDPKA 3
           MQTRTVEV+N+SDLASERE+ EFFSFSGEI++I ++ D G S+  AFVTFKDPKA
Sbjct: 1   MQTRTVEVKNVSDLASEREVHEFFSFSGEIENIHIQRDHGQSK-TAFVTFKDPKA 54


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