BLASTX nr result

ID: Dioscorea21_contig00012557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012557
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571669.1| PREDICTED: uncharacterized protein LOC100842...   193   1e-47
ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent hel...   184   9e-45
emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]   184   9e-45
ref|XP_002464797.1| hypothetical protein SORBIDRAFT_01g026860 [S...   181   6e-44
gb|AFW68962.1| hypothetical protein ZEAMMB73_667161 [Zea mays]        176   1e-42

>ref|XP_003571669.1| PREDICTED: uncharacterized protein LOC100842761 [Brachypodium
            distachyon]
          Length = 1452

 Score =  193 bits (490), Expect = 1e-47
 Identities = 100/155 (64%), Positives = 121/155 (78%), Gaps = 1/155 (0%)
 Frame = -3

Query: 470  HGVGFVADIRRMNVALTRARRALWVVGNANALMQSDDWAALIKDSTSRKCFMDIDKIPKE 291
            HGVGFVADIRRMNVALTRARRALWVVGNANALMQS+DWAAL+ D+ +RKCFMD+D IPK+
Sbjct: 1205 HGVGFVADIRRMNVALTRARRALWVVGNANALMQSEDWAALVTDAKARKCFMDLDSIPKD 1264

Query: 290  FFVAKGSSYPSGKVSSNNSRNLRT-GQRQRHLDMLPEPRSGMRSEDDEKCNTFLPRNGSC 114
            F   K SS   G+ SSNN+RN+RT G R RHLDMLP+PR+GMR+++DE+ N+ +PRN S 
Sbjct: 1265 FLAMKISSNTPGRNSSNNTRNMRTGGPRPRHLDMLPDPRNGMRADEDERPNS-VPRNASY 1323

Query: 113  RNLKSTDNSLDDFGQSGGRSREAMQNSNAKRQNTS 9
            RN       LDD G+ G RSRE +Q    +R N+S
Sbjct: 1324 RN-------LDDLGRPGDRSRENLQFGMPRRPNSS 1351


>ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
            [Vitis vinifera]
          Length = 1375

 Score =  184 bits (466), Expect = 9e-45
 Identities = 102/160 (63%), Positives = 122/160 (76%), Gaps = 5/160 (3%)
 Frame = -3

Query: 470  HGVGFVADIRRMNVALTRARRALWVVGNANALMQSDDWAALIKDSTSRKCFMDIDKIPKE 291
            HGVGFVADIRRMNVALTRARRALWV+GNANALMQSDDWAALI D+ +R C++D+D +PKE
Sbjct: 1210 HGVGFVADIRRMNVALTRARRALWVMGNANALMQSDDWAALISDARARSCYLDMDSLPKE 1269

Query: 290  FFVAKGSSYP--SGKVSSNNSRNLRT-GQRQRHLDMLPEPRSGMRSEDDEKCN-TFLPRN 123
            F V KG +Y   SGKVSS N R LR+ G R R LDM  E +SG  SEDDEK N + + RN
Sbjct: 1270 FLVPKGPTYGPLSGKVSS-NMRGLRSAGPRHRQLDMHVESKSGTPSEDDEKSNASLISRN 1328

Query: 122  GSCRNLKST-DNSLDDFGQSGGRSREAMQNSNAKRQNTSG 6
            G+ R LK T +NSLDDF QS  +SR+A Q    K+Q+++G
Sbjct: 1329 GNYRPLKPTMENSLDDFDQSADKSRDAWQYGIQKKQSSAG 1368


>emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]
          Length = 1408

 Score =  184 bits (466), Expect = 9e-45
 Identities = 102/160 (63%), Positives = 122/160 (76%), Gaps = 5/160 (3%)
 Frame = -3

Query: 470  HGVGFVADIRRMNVALTRARRALWVVGNANALMQSDDWAALIKDSTSRKCFMDIDKIPKE 291
            HGVGFVADIRRMNVALTRARRALWV+GNANALMQSDDWAALI D+ +R C++D+D +PKE
Sbjct: 1243 HGVGFVADIRRMNVALTRARRALWVMGNANALMQSDDWAALISDARARSCYLDMDSLPKE 1302

Query: 290  FFVAKGSSYP--SGKVSSNNSRNLRT-GQRQRHLDMLPEPRSGMRSEDDEKCN-TFLPRN 123
            F V KG +Y   SGKVSS N R LR+ G R R LDM  E +SG  SEDDEK N + + RN
Sbjct: 1303 FLVPKGPTYGPLSGKVSS-NMRGLRSAGPRHRQLDMHVESKSGTPSEDDEKSNASLISRN 1361

Query: 122  GSCRNLKST-DNSLDDFGQSGGRSREAMQNSNAKRQNTSG 6
            G+ R LK T +NSLDDF QS  +SR+A Q    K+Q+++G
Sbjct: 1362 GNYRPLKPTMENSLDDFDQSADKSRDAWQYGIQKKQSSAG 1401


>ref|XP_002464797.1| hypothetical protein SORBIDRAFT_01g026860 [Sorghum bicolor]
           gi|241918651|gb|EER91795.1| hypothetical protein
           SORBIDRAFT_01g026860 [Sorghum bicolor]
          Length = 372

 Score =  181 bits (459), Expect = 6e-44
 Identities = 98/158 (62%), Positives = 117/158 (74%), Gaps = 4/158 (2%)
 Frame = -3

Query: 470 HGVGFVADIRRMNVALTRARRALWVVGNANALMQSDDWAALIKDSTSRKCFMDIDKIPKE 291
           HGVGFVADIRRMNVALTRARRALWVVGNANALMQS+DWA+LI D+ +RKCFMD+D IPK+
Sbjct: 217 HGVGFVADIRRMNVALTRARRALWVVGNANALMQSEDWASLIADAKARKCFMDLDSIPKD 276

Query: 290 FFVAKGSSYPSGKVSSNNSRNLRT--GQRQRHLDMLPEPRSG--MRSEDDEKCNTFLPRN 123
           F   K  S   G+ SSNN RN+RT  G R RHLDM  EPR+G  MR ++DE+ N+ +PRN
Sbjct: 277 FLPMKVPSNTPGRNSSNNIRNMRTGGGPRPRHLDMFSEPRAGMNMRPDEDERLNS-VPRN 335

Query: 122 GSCRNLKSTDNSLDDFGQSGGRSREAMQNSNAKRQNTS 9
           GS RN       LDDFG+ G R R+ +Q    +R N+S
Sbjct: 336 GSYRN-------LDDFGRPGDRPRDNLQFGVPRRPNSS 366


>gb|AFW68962.1| hypothetical protein ZEAMMB73_667161 [Zea mays]
          Length = 1399

 Score =  176 bits (447), Expect = 1e-42
 Identities = 97/158 (61%), Positives = 116/158 (73%), Gaps = 4/158 (2%)
 Frame = -3

Query: 470  HGVGFVADIRRMNVALTRARRALWVVGNANALMQSDDWAALIKDSTSRKCFMDIDKIPKE 291
            HGVGFVADIRRMNVALTRARRALWVVGNANALMQS+DWA+LI D+ +RKCFMD+D IPK+
Sbjct: 1244 HGVGFVADIRRMNVALTRARRALWVVGNANALMQSEDWASLIADAKARKCFMDLDCIPKD 1303

Query: 290  FFVAKGSSYPSGKVSSNNSRNLRT--GQRQRHLDMLPEPRSG--MRSEDDEKCNTFLPRN 123
            F   K  S   G+ SSNN RN+RT  G R RHLDM  EPR+G  MR ++DE+ N+ +PRN
Sbjct: 1304 FLPMKVPSNTPGRNSSNNIRNMRTGGGPRPRHLDMFSEPRTGMNMRPDEDERLNS-VPRN 1362

Query: 122  GSCRNLKSTDNSLDDFGQSGGRSREAMQNSNAKRQNTS 9
            GS RN       LDDF + G R R+ +Q    +R N+S
Sbjct: 1363 GSYRN-------LDDFVRPGDRPRDNLQFGVPRRPNSS 1393


Top